RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 A0A087WWV3 80 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 LIG1P18858 919 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 HOXC9P31274 260 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 MCM5P33992 734 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 FOSBP53539 338 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 TERF1P54274 439 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 CDC37L1Q7L3B6 337 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 SIL1Q9H173 461 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 DIAPH3Q9NSV4 1193 aa12.43□□□□□ -0.42
CDC42SE1-207ENST00000540998 IGSF3O75054 1194 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 PHF14O94880 888 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 SPATA31D1Q6ZQQ2 1576 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 LUZP1Q86V48 1076 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 AMOTL2Q9Y2J4 779 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 PTPRUQ92729 1446 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 KDM4AO75164 1064 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 UBE2HP62256 183 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 CCDC8Q9H0W5 538 aaPredicted RBP12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 PDRG1Q9NUG6 133 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 PRDM4Q9UKN5 801 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 SBNO1A3KN83 1393 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 ADAMTS13Q76LX8 1427 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 LRMPQ12912 555 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 MYRIPQ8NFW9 859 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 LRRC59Q96AG4 307 aaKnown RBP12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
CDC42SE1-207ENST00000540998 KDRP35968 1356 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 KCNJ4P48050 445 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 POLA2Q14181 598 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 TTC6Q86TZ1 520 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 NRBP1Q9UHY1 535 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 PTGS1P23219 599 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 FUCA2Q9BTY2 467 aa12.41□□□□□ -0.42
CDC42SE1-207ENST00000540998 ATP2B3Q16720 1220 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 ABTB2Q8N961 1025 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 DDX11Q96FC9 970 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 SSH2Q76I76 1423 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 AIMP1Q12904 312 aaKnown RBP12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 BEND3Q5T5X7 828 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 DNAAF4Q8WXU2 420 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 AACSQ86V21 672 aa12.4□□□□□ -0.42
CDC42SE1-207ENST00000540998 TMEM2Q9UHN6 1383 aa12.4□□□□□ -0.43
CDC42SE1-207ENST00000540998 TECPR2O15040 1411 aa12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 CEBPZQ03701 1054 aaKnown RBP12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 BOLA2Q9H3K6 86 aa12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
CDC42SE1-207ENST00000540998 PIP4K2AP48426 406 aaPredicted RBP12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 NMIQ13287 307 aaPredicted RBP12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 FMN2Q9NZ56 1722 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 A0A0D9SFI3 127 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 TNRQ92752 1358 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 EIF4A1P60842 406 aaKnown RBP12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 LARP1BQ659C4 914 aaKnown RBP12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 MAP3K2Q9Y2U5 619 aa12.38□□□□□ -0.43
CDC42SE1-207ENST00000540998 ADCY9O60503 1353 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 JAK2O60674 1132 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 SLFNL1Q499Z3 407 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 ZNF589Q86UQ0 364 aaPredicted RBP12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 FAM184AQ8NB25 1140 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 C9orf78Q9NZ63 289 aaPredicted RBP12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 CYP46A1Q9Y6A2 500 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 CREB3L3Q68CJ9 461 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 LARP1Q6PKG0 1096 aaKnown RBP12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 NALCNQ8IZF0 1738 aa12.37□□□□□ -0.43
CDC42SE1-207ENST00000540998 CLASRPQ8N2M8 674 aaKnown RBP12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 ERCC4Q92889 916 aaPredicted RBP12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 EAF2Q96CJ1 260 aaPredicted RBP12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 C16orf45Q96MC5 204 aaPredicted RBP12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.432e-6■■□□□ 11.5
CDC42SE1-207ENST00000540998 KIAA1524Q8TCG1 905 aa12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 MRVI1Q9Y6F6 885 aa12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 ARID5BQ14865 1188 aa12.36□□□□□ -0.43
CDC42SE1-207ENST00000540998 ANO6Q4KMQ2 910 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms