RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 HOXB7P09629 217 aa21.98■■□□□ 1.11
CD9-209ENST00000540891 DPEP1P16444 411 aa21.98■■□□□ 1.11
CD9-209ENST00000540891 CARMIL3Q8ND23 1372 aa21.98■■□□□ 1.11
CD9-209ENST00000540891 KCNA3P22001 575 aa21.97■■□□□ 1.11
CD9-209ENST00000540891 DUSP27Q5VZP5 1158 aa21.97■■□□□ 1.11
CD9-209ENST00000540891 SALL2Q9Y467 1007 aaPredicted RBP21.97■■□□□ 1.11
CD9-209ENST00000540891 ZNF652Q9Y2D9 606 aa21.96■■□□□ 1.11
CD9-209ENST00000540891 MAP3K15Q6ZN16 1313 aa21.96■■□□□ 1.11
CD9-209ENST00000540891 ERVV-1B6SEH8 477 aa21.95■■□□□ 1.1
CD9-209ENST00000540891 CCER2I3L3R5 266 aa21.95■■□□□ 1.1
CD9-209ENST00000540891 HDGFL1Q5TGJ6 251 aa21.95■■□□□ 1.1
CD9-209ENST00000540891 PRR5LQ6MZQ0 368 aa21.95■■□□□ 1.1
CD9-209ENST00000540891 C8orf58Q8NAV2 365 aa21.95■■□□□ 1.1
CD9-209ENST00000540891 TSR2Q969E8 191 aaKnown RBP21.95■■□□□ 1.1
CD9-209ENST00000540891 SETDB2Q96T68 719 aa21.95■■□□□ 1.1
CD9-209ENST00000540891 DDX21Q9NR30 783 aaKnown RBP eCLIP21.94■■□□□ 1.1
CD9-209ENST00000540891 CHPF2Q9P2E5 772 aa21.94■■□□□ 1.1
CD9-209ENST00000540891 IL16Q14005 1332 aa21.94■■□□□ 1.1
CD9-209ENST00000540891 CHRNA5P30532 468 aa21.93■■□□□ 1.1
CD9-209ENST00000540891 BRCA1P38398 1863 aaKnown RBP21.93■■□□□ 1.1
CD9-209ENST00000540891 KIF6Q6ZMV9 814 aa21.93■■□□□ 1.1
CD9-209ENST00000540891 ZBTB3Q9H5J0 574 aa21.93■■□□□ 1.1
CD9-209ENST00000540891 ELL2O00472 640 aaPredicted RBP21.92■■□□□ 1.1
CD9-209ENST00000540891 CCDC24Q8N4L8 307 aa21.92■■□□□ 1.1
CD9-209ENST00000540891 NIP7Q9Y221 180 aaKnown RBP eCLIP21.92■■□□□ 1.1
CD9-209ENST00000540891 ATP10DQ9P241 1426 aa21.91■■□□□ 1.1
CD9-209ENST00000540891 GRIN3BO60391 1043 aa21.91■■□□□ 1.1
CD9-209ENST00000540891 COPS6Q7L5N1 327 aa21.91■■□□□ 1.1
CD9-209ENST00000540891 WDR63Q8IWG1 891 aa21.91■■□□□ 1.1
CD9-209ENST00000540891 TSPYL6Q8N831 410 aa21.91■■□□□ 1.1
CD9-209ENST00000540891 ANKRD31Q8N7Z5 1873 aa21.91■■□□□ 1.1
CD9-209ENST00000540891 NUP98P52948 1817 aa21.9■■□□□ 1.1
CD9-209ENST00000540891 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
CD9-209ENST00000540891 CNBD1Q8NA66 436 aa21.9■■□□□ 1.1
CD9-209ENST00000540891 XAGE3Q8WTP9 111 aa21.9■■□□□ 1.1
CD9-209ENST00000540891 GIGYF2Q6Y7W6 1299 aaKnown RBP21.89■■□□□ 1.09
CD9-209ENST00000540891 SPINK5Q9NQ38 1064 aaPredicted RBP21.89■■□□□ 1.09
CD9-209ENST00000540891 DBF4Q9UBU7 674 aaPredicted RBP21.89■■□□□ 1.09
CD9-209ENST00000540891 UBN2Q6ZU65 1347 aa21.88■■□□□ 1.09
CD9-209ENST00000540891 ZNF521Q96K83 1311 aa21.88■■□□□ 1.09
CD9-209ENST00000540891 FANCIQ9NVI1 1328 aa21.88■■□□□ 1.09
CD9-209ENST00000540891 AIMP1Q12904 312 aaKnown RBP21.88■■□□□ 1.09
CD9-209ENST00000540891 NBPF5PQ86XG9 351 aaPredicted RBP21.88■■□□□ 1.09
CD9-209ENST00000540891 BRIP1Q9BX63 1249 aa21.88■■□□□ 1.09
CD9-209ENST00000540891 BCS1LQ9Y276 419 aa21.88■■□□□ 1.09
CD9-209ENST00000540891 YY1P25490 414 aa21.87■■□□□ 1.09
CD9-209ENST00000540891 ZNF34Q8IZ26 560 aa21.87■■□□□ 1.09
CD9-209ENST00000540891 PIM2Q9P1W9 311 aa21.87■■□□□ 1.09
CD9-209ENST00000540891 DLEC1Q9Y238 1755 aa21.87■■□□□ 1.09
CD9-209ENST00000540891 FAM177BA6PVY3 158 aa21.86■■□□□ 1.09
CD9-209ENST00000540891 GPTP24298 496 aa21.86■■□□□ 1.09
CD9-209ENST00000540891 C2CD5Q86YS7 1000 aa21.86■■□□□ 1.09
CD9-209ENST00000540891 ST5P78524 1137 aa21.85■■□□□ 1.09
CD9-209ENST00000540891 MIER1Q8N108 512 aa21.85■■□□□ 1.09
CD9-209ENST00000540891 HYPKQ9NX55 129 aa21.85■■□□□ 1.09
CD9-209ENST00000540891 COL11A2P13942 1736 aaPredicted RBP21.85■■□□□ 1.09
CD9-209ENST00000540891 CHD4Q14839 1912 aa21.84■■□□□ 1.09
CD9-209ENST00000540891 PDE6BP35913 854 aa21.84■■□□□ 1.09
CD9-209ENST00000540891 SUSD4Q5VX71 490 aa21.84■■□□□ 1.09
CD9-209ENST00000540891 TPTE2Q6XPS3 522 aa21.84■■□□□ 1.09
CD9-209ENST00000540891 H0YIN7 160 aa21.83■■□□□ 1.09
CD9-209ENST00000540891 NPHP1O15259 732 aa21.83■■□□□ 1.09
CD9-209ENST00000540891 TWISTNBQ3B726 338 aaPredicted RBP21.83■■□□□ 1.09
CD9-209ENST00000540891 DALRD3Q5D0E6 543 aaKnown RBP21.83■■□□□ 1.09
CD9-209ENST00000540891 ABCC12Q96J65 1359 aa21.83■■□□□ 1.08
CD9-209ENST00000540891 IBTKQ9P2D0 1353 aaPredicted RBP21.83■■□□□ 1.08
CD9-209ENST00000540891 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
CD9-209ENST00000540891 PHAXQ9H814 394 aaKnown RBP21.82■■□□□ 1.08
CD9-209ENST00000540891 ARFGEF1Q9Y6D6 1849 aa21.82■■□□□ 1.08
CD9-209ENST00000540891 NTSR2O95665 410 aa21.81■■□□□ 1.08
CD9-209ENST00000540891 TCIRG1Q13488 830 aa21.81■■□□□ 1.08
CD9-209ENST00000540891 ANKRD13DQ6ZTN6 518 aa21.81■■□□□ 1.08
CD9-209ENST00000540891 NUTM1Q86Y26 1132 aa21.81■■□□□ 1.08
CD9-209ENST00000540891 PLBD2Q8NHP8 589 aa21.81■■□□□ 1.08
CD9-209ENST00000540891 PDZRN3Q9UPQ7 1066 aa21.81■■□□□ 1.08
CD9-209ENST00000540891 ANKRD36CQ5JPF3 1778 aa21.81■■□□□ 1.08
CD9-209ENST00000540891 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
CD9-209ENST00000540891 KLRG2A4D1S0 409 aaPredicted RBP21.8■■□□□ 1.08
CD9-209ENST00000540891 SRGNP10124 158 aa21.8■■□□□ 1.08
CD9-209ENST00000540891 EXOSC9Q06265 439 aaKnown RBP21.8■■□□□ 1.08
CD9-209ENST00000540891 ERFEQ4G0M1 354 aa21.8■■□□□ 1.08
CD9-209ENST00000540891 NYXQ9GZU5 481 aa21.8■■□□□ 1.08
CD9-209ENST00000540891 TCERG1O14776 1098 aaKnown RBP21.79■■□□□ 1.08
CD9-209ENST00000540891 GOLGA2Q08379 1002 aa21.79■■□□□ 1.08
CD9-209ENST00000540891 PARP10Q53GL7 1025 aa21.79■■□□□ 1.08
CD9-209ENST00000540891 HSP90AB3PQ58FF7 597 aa21.79■■□□□ 1.08
CD9-209ENST00000540891 TTLL6Q8N841 843 aa21.79■■□□□ 1.08
CD9-209ENST00000540891 VAMP4O75379 141 aa21.78■■□□□ 1.08
CD9-209ENST00000540891 NLRP10Q86W26 655 aa21.78■■□□□ 1.08
CD9-209ENST00000540891 ZNF622Q969S3 477 aaKnown RBP eCLIP21.78■■□□□ 1.08
CD9-209ENST00000540891 GTF2E1P29083 439 aaPredicted RBP21.77■■□□□ 1.08
CD9-209ENST00000540891 CHMP4AQ9BY43 222 aa21.77■■□□□ 1.08
CD9-209ENST00000540891 MYH16Q9H6N6 1097 aa21.77■■□□□ 1.08
CD9-209ENST00000540891 RIC1Q4ADV7 1423 aa21.77■■□□□ 1.08
CD9-209ENST00000540891 ARFGEF2Q9Y6D5 1785 aa21.76■■□□□ 1.07
CD9-209ENST00000540891 STYK1Q6J9G0 422 aa21.76■■□□□ 1.07
CD9-209ENST00000540891 ARHGAP27Q6ZUM4 889 aa21.76■■□□□ 1.07
CD9-209ENST00000540891 PPP1R42Q7Z4L9 355 aa21.76■■□□□ 1.07
CD9-209ENST00000540891 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
CD9-209ENST00000540891 ISCA1Q9BUE6 129 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms