RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 LRP10Q7Z4F1 713 aa29.87■■■□□ 2.37
CLTA-210ENST00000540080 CHPF2Q9P2E5 772 aa29.87■■■□□ 2.37
CLTA-210ENST00000540080 BCORQ6W2J9 1755 aa29.87■■■□□ 2.37
CLTA-210ENST00000540080 ZBTB3Q9H5J0 574 aa29.86■■■□□ 2.37
CLTA-210ENST00000540080 DDX21Q9NR30 783 aaKnown RBP eCLIP29.86■■■□□ 2.37
CLTA-210ENST00000540080 MAP3K15Q6ZN16 1313 aa29.86■■■□□ 2.37
CLTA-210ENST00000540080 WWC3Q9ULE0 1092 aa29.85■■■□□ 2.37
CLTA-210ENST00000540080 A0A0G2JLW4 131 aa29.84■■■□□ 2.37
CLTA-210ENST00000540080 ERVV-1B6SEH8 477 aa29.84■■■□□ 2.37
CLTA-210ENST00000540080 TGFB2P61812 414 aa29.84■■■□□ 2.37
CLTA-210ENST00000540080 AIMP1Q12904 312 aaKnown RBP29.84■■■□□ 2.37
CLTA-210ENST00000540080 TSPYL6Q8N831 410 aa29.84■■■□□ 2.37
CLTA-210ENST00000540080 CARMIL3Q8ND23 1372 aa29.83■■■□□ 2.37
CLTA-210ENST00000540080 COPS6Q7L5N1 327 aa29.83■■■□□ 2.37
CLTA-210ENST00000540080 DBF4Q9UBU7 674 aaPredicted RBP29.83■■■□□ 2.37
CLTA-210ENST00000540080 NIP7Q9Y221 180 aaKnown RBP eCLIP29.83■■■□□ 2.37
CLTA-210ENST00000540080 RGL2O15211 777 aa29.82■■■□□ 2.36
CLTA-210ENST00000540080 XAGE3Q8WTP9 111 aa29.82■■■□□ 2.36
CLTA-210ENST00000540080 KIF13BQ9NQT8 1826 aa29.82■■■□□ 2.36
CLTA-210ENST00000540080 FANCIQ9NVI1 1328 aa29.81■■■□□ 2.36
CLTA-210ENST00000540080 AFDNP55196 1824 aaKnown RBP29.81■■■□□ 2.36
CLTA-210ENST00000540080 DPEP1P16444 411 aa29.81■■■□□ 2.36
CLTA-210ENST00000540080 SPINK5Q9NQ38 1064 aaPredicted RBP29.81■■■□□ 2.36
CLTA-210ENST00000540080 PXDNLA1KZ92 1463 aa29.8■■■□□ 2.36
CLTA-210ENST00000540080 NPHP1O15259 732 aa29.8■■■□□ 2.36
CLTA-210ENST00000540080 CCDC24Q8N4L8 307 aa29.8■■■□□ 2.36
CLTA-210ENST00000540080 YBX3P16989 372 aaKnown RBP eCLIP29.79■■■□□ 2.36
CLTA-210ENST00000540080 FAM177BA6PVY3 158 aa29.78■■■□□ 2.36
CLTA-210ENST00000540080 PRR5LQ6MZQ0 368 aa29.78■■■□□ 2.36
CLTA-210ENST00000540080 NRXN2Q9P2S2 1712 aa29.78■■■□□ 2.36
CLTA-210ENST00000540080 GOLGA2Q08379 1002 aa29.77■■■□□ 2.36
CLTA-210ENST00000540080 TWISTNBQ3B726 338 aaPredicted RBP29.77■■■□□ 2.36
CLTA-210ENST00000540080 NBPF5PQ86XG9 351 aaPredicted RBP29.77■■■□□ 2.36
CLTA-210ENST00000540080 CNBD1Q8NA66 436 aa29.77■■■□□ 2.36
CLTA-210ENST00000540080 HYPKQ9NX55 129 aa29.77■■■□□ 2.36
CLTA-210ENST00000540080 N4BP2Q86UW6 1770 aaPredicted RBP29.77■■■□□ 2.36
CLTA-210ENST00000540080 ZNF521Q96K83 1311 aa29.76■■■□□ 2.36
CLTA-210ENST00000540080 CHRNA5P30532 468 aa29.76■■■□□ 2.35
CLTA-210ENST00000540080 GIGYF2Q6Y7W6 1299 aaKnown RBP29.76■■■□□ 2.35
CLTA-210ENST00000540080 GPTP24298 496 aa29.75■■■□□ 2.35
CLTA-210ENST00000540080 CCDC30Q5VVM6 783 aa29.75■■■□□ 2.35
CLTA-210ENST00000540080 MYH16Q9H6N6 1097 aa29.75■■■□□ 2.35
CLTA-210ENST00000540080 KIAA1551Q9HCM1 1747 aa29.74■■■□□ 2.35
CLTA-210ENST00000540080 KCNA3P22001 575 aa29.74■■■□□ 2.35
CLTA-210ENST00000540080 EXOSC9Q06265 439 aaKnown RBP29.74■■■□□ 2.35
CLTA-210ENST00000540080 CHMP4AQ9BY43 222 aa29.74■■■□□ 2.35
CLTA-210ENST00000540080 TCERG1O14776 1098 aaKnown RBP29.73■■■□□ 2.35
CLTA-210ENST00000540080 ST5P78524 1137 aa29.73■■■□□ 2.35
CLTA-210ENST00000540080 TPTE2Q6XPS3 522 aa29.73■■■□□ 2.35
CLTA-210ENST00000540080 NUP98P52948 1817 aa29.73■■■□□ 2.35
CLTA-210ENST00000540080 BRIP1Q9BX63 1249 aa29.72■■■□□ 2.35
CLTA-210ENST00000540080 PHAXQ9H814 394 aaKnown RBP29.72■■■□□ 2.35
CLTA-210ENST00000540080 ATP10DQ9P241 1426 aa29.71■■■□□ 2.35
CLTA-210ENST00000540080 C2CD5Q86YS7 1000 aa29.71■■■□□ 2.35
CLTA-210ENST00000540080 ZNF34Q8IZ26 560 aa29.71■■■□□ 2.35
CLTA-210ENST00000540080 PIM2Q9P1W9 311 aa29.71■■■□□ 2.35
CLTA-210ENST00000540080 BCS1LQ9Y276 419 aa29.71■■■□□ 2.35
CLTA-210ENST00000540080 GRIN3BO60391 1043 aa29.7■■■□□ 2.35
CLTA-210ENST00000540080 ANKRD13DQ6ZTN6 518 aa29.7■■■□□ 2.35
CLTA-210ENST00000540080 UBN2Q6ZU65 1347 aa29.7■■■□□ 2.34
CLTA-210ENST00000540080 GTF2E1P29083 439 aaPredicted RBP29.69■■■□□ 2.34
CLTA-210ENST00000540080 PDE6BP35913 854 aa29.69■■■□□ 2.34
CLTA-210ENST00000540080 PLBD2Q8NHP8 589 aa29.69■■■□□ 2.34
CLTA-210ENST00000540080 H0YIN7 160 aa29.68■■■□□ 2.34
CLTA-210ENST00000540080 SUSD4Q5VX71 490 aa29.68■■■□□ 2.34
CLTA-210ENST00000540080 STK31Q9BXU1 1019 aa29.68■■■□□ 2.34
CLTA-210ENST00000540080 VAMP4O75379 141 aa29.67■■■□□ 2.34
CLTA-210ENST00000540080 TCIRG1Q13488 830 aa29.66■■■□□ 2.34
CLTA-210ENST00000540080 HSP90AB3PQ58FF7 597 aa29.66■■■□□ 2.34
CLTA-210ENST00000540080 NUTM1Q86Y26 1132 aa29.66■■■□□ 2.34
CLTA-210ENST00000540080 NYXQ9GZU5 481 aa29.66■■■□□ 2.34
CLTA-210ENST00000540080 DALRD3Q5D0E6 543 aaKnown RBP29.65■■■□□ 2.34
CLTA-210ENST00000540080 ANKRD31Q8N7Z5 1873 aa29.64■■■□□ 2.34
CLTA-210ENST00000540080 PARP10Q53GL7 1025 aa29.64■■■□□ 2.34
CLTA-210ENST00000540080 RIC3Q7Z5B4 369 aa29.64■■■□□ 2.34
CLTA-210ENST00000540080 E9PSI1 815 aa29.63■■■□□ 2.33
CLTA-210ENST00000540080 SLC4A2P04920 1241 aa29.63■■■□□ 2.33
CLTA-210ENST00000540080 ERFEQ4G0M1 354 aa29.63■■■□□ 2.33
CLTA-210ENST00000540080 PPP1R42Q7Z4L9 355 aa29.63■■■□□ 2.33
CLTA-210ENST00000540080 ZNF622Q969S3 477 aaKnown RBP eCLIP29.63■■■□□ 2.333e-9■□□□□ 8.1
CLTA-210ENST00000540080 ZNF428Q96B54 188 aa29.62■■■□□ 2.33
CLTA-210ENST00000540080 CDCA7LQ96GN5 454 aa29.62■■■□□ 2.33
CLTA-210ENST00000540080 PDZRN3Q9UPQ7 1066 aa29.62■■■□□ 2.33
CLTA-210ENST00000540080 GOLGB1Q14789 3259 aaKnown RBP29.62■■■□□ 2.33
CLTA-210ENST00000540080 NTSR2O95665 410 aa29.61■■■□□ 2.33
CLTA-210ENST00000540080 SLFN5Q08AF3 891 aa29.61■■■□□ 2.33
CLTA-210ENST00000540080 NLRP10Q86W26 655 aa29.61■■■□□ 2.33
CLTA-210ENST00000540080 UTP14AQ9BVJ6 771 aaKnown RBP29.61■■■□□ 2.33
CLTA-210ENST00000540080 BRCA1P38398 1863 aaKnown RBP29.6■■■□□ 2.33
CLTA-210ENST00000540080 ATP5J2-PTCD1G3V325 749 aa29.6■■■□□ 2.33
CLTA-210ENST00000540080 G2E3Q7L622 706 aa29.6■■■□□ 2.33
CLTA-210ENST00000540080 DDX58O95786 925 aaKnown RBP29.59■■■□□ 2.33
CLTA-210ENST00000540080 YY1P25490 414 aa29.59■■■□□ 2.33
CLTA-210ENST00000540080 TTLL6Q8N841 843 aa29.59■■■□□ 2.33
CLTA-210ENST00000540080 ABCC12Q96J65 1359 aa29.59■■■□□ 2.33
CLTA-210ENST00000540080 IBTKQ9P2D0 1353 aaPredicted RBP29.59■■■□□ 2.33
CLTA-210ENST00000540080 UTRNP46939 3433 aa29.58■■■□□ 2.33
CLTA-210ENST00000540080 SRGNP10124 158 aa29.57■■■□□ 2.32
CLTA-210ENST00000540080 ARHGAP27Q6ZUM4 889 aa29.57■■■□□ 2.32
CLTA-210ENST00000540080 ISCA1Q9BUE6 129 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms