RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CLEC4GQ6UXB4 293 aa23.79■■□□□ 1.4
SNRPA1-203ENST00000540017 TSR2Q969E8 191 aaKnown RBP23.79■■□□□ 1.4
SNRPA1-203ENST00000540017 DPEP1P16444 411 aa23.78■■□□□ 1.4
SNRPA1-203ENST00000540017 DIEXFQ68CQ4 756 aaKnown RBP23.78■■□□□ 1.4
SNRPA1-203ENST00000540017 C8orf58Q8NAV2 365 aa23.78■■□□□ 1.4
SNRPA1-203ENST00000540017 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
SNRPA1-203ENST00000540017 CCER2I3L3R5 266 aa23.77■■□□□ 1.4
SNRPA1-203ENST00000540017 ELL2O00472 640 aaPredicted RBP23.77■■□□□ 1.4
SNRPA1-203ENST00000540017 HOXB7P09629 217 aa23.77■■□□□ 1.4
SNRPA1-203ENST00000540017 KCNA3P22001 575 aa23.77■■□□□ 1.4
SNRPA1-203ENST00000540017 HDGFL1Q5TGJ6 251 aa23.77■■□□□ 1.4
SNRPA1-203ENST00000540017 SETDB2Q96T68 719 aa23.77■■□□□ 1.4
SNRPA1-203ENST00000540017 MAP3K15Q6ZN16 1313 aa23.77■■□□□ 1.4
SNRPA1-203ENST00000540017 CCDC24Q8N4L8 307 aa23.76■■□□□ 1.39
SNRPA1-203ENST00000540017 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
SNRPA1-203ENST00000540017 ZNF652Q9Y2D9 606 aa23.76■■□□□ 1.39
SNRPA1-203ENST00000540017 IL16Q14005 1332 aa23.76■■□□□ 1.39
SNRPA1-203ENST00000540017 ERVV-1B6SEH8 477 aa23.75■■□□□ 1.39
SNRPA1-203ENST00000540017 RGL2O15211 777 aa23.75■■□□□ 1.39
SNRPA1-203ENST00000540017 TSPYL6Q8N831 410 aa23.75■■□□□ 1.39
SNRPA1-203ENST00000540017 ZBTB3Q9H5J0 574 aa23.75■■□□□ 1.39
SNRPA1-203ENST00000540017 DDX21Q9NR30 783 aaKnown RBP eCLIP23.75■■□□□ 1.39
SNRPA1-203ENST00000540017 CHRNA5P30532 468 aa23.74■■□□□ 1.39
SNRPA1-203ENST00000540017 PRR5LQ6MZQ0 368 aa23.74■■□□□ 1.39
SNRPA1-203ENST00000540017 KIF6Q6ZMV9 814 aa23.74■■□□□ 1.39
SNRPA1-203ENST00000540017 NUP98P52948 1817 aa23.73■■□□□ 1.39
SNRPA1-203ENST00000540017 COPS6Q7L5N1 327 aa23.73■■□□□ 1.39
SNRPA1-203ENST00000540017 WDR63Q8IWG1 891 aa23.73■■□□□ 1.39
SNRPA1-203ENST00000540017 MIER1Q8N108 512 aa23.73■■□□□ 1.39
SNRPA1-203ENST00000540017 XAGE3Q8WTP9 111 aa23.73■■□□□ 1.39
SNRPA1-203ENST00000540017 SPINK5Q9NQ38 1064 aaPredicted RBP23.73■■□□□ 1.39
SNRPA1-203ENST00000540017 NIP7Q9Y221 180 aaKnown RBP eCLIP23.73■■□□□ 1.39
SNRPA1-203ENST00000540017 AIMP1Q12904 312 aaKnown RBP23.72■■□□□ 1.39
SNRPA1-203ENST00000540017 ANKRD31Q8N7Z5 1873 aa23.71■■□□□ 1.39
SNRPA1-203ENST00000540017 BRCA1P38398 1863 aaKnown RBP23.7■■□□□ 1.39
SNRPA1-203ENST00000540017 CNBD1Q8NA66 436 aa23.7■■□□□ 1.38
SNRPA1-203ENST00000540017 DBF4Q9UBU7 674 aaPredicted RBP23.7■■□□□ 1.38
SNRPA1-203ENST00000540017 ATP10DQ9P241 1426 aa23.69■■□□□ 1.38
SNRPA1-203ENST00000540017 FANCIQ9NVI1 1328 aa23.69■■□□□ 1.38
SNRPA1-203ENST00000540017 FAM177BA6PVY3 158 aa23.69■■□□□ 1.38
SNRPA1-203ENST00000540017 GIGYF2Q6Y7W6 1299 aaKnown RBP23.69■■□□□ 1.38
SNRPA1-203ENST00000540017 NBPF5PQ86XG9 351 aaPredicted RBP23.69■■□□□ 1.38
SNRPA1-203ENST00000540017 UBN2Q6ZU65 1347 aa23.68■■□□□ 1.38
SNRPA1-203ENST00000540017 ZNF521Q96K83 1311 aa23.68■■□□□ 1.38
SNRPA1-203ENST00000540017 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
SNRPA1-203ENST00000540017 GPTP24298 496 aa23.68■■□□□ 1.38
SNRPA1-203ENST00000540017 BCS1LQ9Y276 419 aa23.68■■□□□ 1.38
SNRPA1-203ENST00000540017 ZNF34Q8IZ26 560 aa23.67■■□□□ 1.38
SNRPA1-203ENST00000540017 BRIP1Q9BX63 1249 aa23.67■■□□□ 1.38
SNRPA1-203ENST00000540017 PIM2Q9P1W9 311 aa23.67■■□□□ 1.38
SNRPA1-203ENST00000540017 NPHP1O15259 732 aa23.65■■□□□ 1.38
SNRPA1-203ENST00000540017 C2CD5Q86YS7 1000 aa23.65■■□□□ 1.38
SNRPA1-203ENST00000540017 PHAXQ9H814 394 aaKnown RBP23.65■■□□□ 1.38
SNRPA1-203ENST00000540017 HYPKQ9NX55 129 aa23.65■■□□□ 1.38
SNRPA1-203ENST00000540017 YY1P25490 414 aa23.64■■□□□ 1.37
SNRPA1-203ENST00000540017 ST5P78524 1137 aa23.64■■□□□ 1.37
SNRPA1-203ENST00000540017 TWISTNBQ3B726 338 aaPredicted RBP23.64■■□□□ 1.37
SNRPA1-203ENST00000540017 SUSD4Q5VX71 490 aa23.64■■□□□ 1.37
SNRPA1-203ENST00000540017 TPTE2Q6XPS3 522 aa23.64■■□□□ 1.37
SNRPA1-203ENST00000540017 DLEC1Q9Y238 1755 aa23.63■■□□□ 1.37
SNRPA1-203ENST00000540017 CHD4Q14839 1912 aa23.63■■□□□ 1.37
SNRPA1-203ENST00000540017 TCERG1O14776 1098 aaKnown RBP23.63■■□□□ 1.37
SNRPA1-203ENST00000540017 COL11A2P13942 1736 aaPredicted RBP23.63■■□□□ 1.37
SNRPA1-203ENST00000540017 EXOSC9Q06265 439 aaKnown RBP23.63■■□□□ 1.37
SNRPA1-203ENST00000540017 CCDC30Q5VVM6 783 aa23.63■■□□□ 1.37
SNRPA1-203ENST00000540017 H0YIN7 160 aa23.62■■□□□ 1.37
SNRPA1-203ENST00000540017 PDE6BP35913 854 aa23.62■■□□□ 1.37
SNRPA1-203ENST00000540017 DALRD3Q5D0E6 543 aaKnown RBP23.62■■□□□ 1.37
SNRPA1-203ENST00000540017 ANKRD13DQ6ZTN6 518 aa23.62■■□□□ 1.37
SNRPA1-203ENST00000540017 NUTM1Q86Y26 1132 aa23.62■■□□□ 1.37
SNRPA1-203ENST00000540017 PLBD2Q8NHP8 589 aa23.62■■□□□ 1.37
SNRPA1-203ENST00000540017 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
SNRPA1-203ENST00000540017 ABCC12Q96J65 1359 aa23.61■■□□□ 1.37
SNRPA1-203ENST00000540017 NTSR2O95665 410 aa23.6■■□□□ 1.37
SNRPA1-203ENST00000540017 TCIRG1Q13488 830 aa23.6■■□□□ 1.37
SNRPA1-203ENST00000540017 ERFEQ4G0M1 354 aa23.6■■□□□ 1.37
SNRPA1-203ENST00000540017 ANKRD36CQ5JPF3 1778 aa23.6■■□□□ 1.37
SNRPA1-203ENST00000540017 ARFGEF1Q9Y6D6 1849 aa23.59■■□□□ 1.37
SNRPA1-203ENST00000540017 VAMP4O75379 141 aa23.59■■□□□ 1.37
SNRPA1-203ENST00000540017 NYXQ9GZU5 481 aa23.59■■□□□ 1.37
SNRPA1-203ENST00000540017 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
SNRPA1-203ENST00000540017 IBTKQ9P2D0 1353 aaPredicted RBP23.58■■□□□ 1.37
SNRPA1-203ENST00000540017 KLRG2A4D1S0 409 aaPredicted RBP23.58■■□□□ 1.37
SNRPA1-203ENST00000540017 SRGNP10124 158 aa23.58■■□□□ 1.37
SNRPA1-203ENST00000540017 GTF2E1P29083 439 aaPredicted RBP23.58■■□□□ 1.37
SNRPA1-203ENST00000540017 PARP10Q53GL7 1025 aa23.58■■□□□ 1.37
SNRPA1-203ENST00000540017 NLRP10Q86W26 655 aa23.58■■□□□ 1.37
SNRPA1-203ENST00000540017 ZNF622Q969S3 477 aaKnown RBP eCLIP23.58■■□□□ 1.371e-7■□□□□ 10.2
SNRPA1-203ENST00000540017 ZNF428Q96B54 188 aa23.58■■□□□ 1.37
SNRPA1-203ENST00000540017 TNRC6CQ9HCJ0 1690 aaKnown RBP23.57■■□□□ 1.36
SNRPA1-203ENST00000540017 HSP90AB3PQ58FF7 597 aa23.57■■□□□ 1.36
SNRPA1-203ENST00000540017 TTLL6Q8N841 843 aa23.57■■□□□ 1.36
SNRPA1-203ENST00000540017 PDZRN3Q9UPQ7 1066 aa23.57■■□□□ 1.36
SNRPA1-203ENST00000540017 ARFGEF2Q9Y6D5 1785 aa23.56■■□□□ 1.36
SNRPA1-203ENST00000540017 ARHGAP27Q6ZUM4 889 aa23.56■■□□□ 1.36
SNRPA1-203ENST00000540017 G2E3Q7L622 706 aa23.56■■□□□ 1.36
SNRPA1-203ENST00000540017 CHMP4AQ9BY43 222 aa23.56■■□□□ 1.36
SNRPA1-203ENST00000540017 ATP5J2-PTCD1G3V325 749 aa23.55■■□□□ 1.36
SNRPA1-203ENST00000540017 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
SNRPA1-203ENST00000540017 SYNE4Q8N205 404 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms