RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 IL6STP40189 918 aaPredicted RBP20.37■□□□□ 0.85
TRAF3-204ENST00000539721 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
TRAF3-204ENST00000539721 AFDNP55196 1824 aaKnown RBP20.36■□□□□ 0.85
TRAF3-204ENST00000539721 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
TRAF3-204ENST00000539721 KIF6Q6ZMV9 814 aa20.36■□□□□ 0.85
TRAF3-204ENST00000539721 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
TRAF3-204ENST00000539721 TNS1Q9HBL0 1735 aaKnown RBP20.35■□□□□ 0.85
TRAF3-204ENST00000539721 MEIS3Q99687 375 aa20.35■□□□□ 0.85
TRAF3-204ENST00000539721 MYD88Q99836 296 aa20.35■□□□□ 0.85
TRAF3-204ENST00000539721 ZBTB3Q9H5J0 574 aa20.35■□□□□ 0.85
TRAF3-204ENST00000539721 ALDH1L1O75891 902 aa20.34■□□□□ 0.85
TRAF3-204ENST00000539721 LINS1Q8NG48 757 aa20.34■□□□□ 0.85
TRAF3-204ENST00000539721 ARXQ96QS3 562 aa20.34■□□□□ 0.85
TRAF3-204ENST00000539721 PCDHB15Q9Y5E8 787 aa20.34■□□□□ 0.85
TRAF3-204ENST00000539721 CNTNAP4Q9C0A0 1308 aa20.34■□□□□ 0.85
TRAF3-204ENST00000539721 EP400Q96L91 3159 aa20.34■□□□□ 0.85
TRAF3-204ENST00000539721 C1orf115Q9H7X2 142 aa20.34■□□□□ 0.85
TRAF3-204ENST00000539721 C4BP0C0L5 1744 aa20.33■□□□□ 0.84
TRAF3-204ENST00000539721 EIF5P55010 431 aaKnown RBP20.33■□□□□ 0.84
TRAF3-204ENST00000539721 CWF19L2Q2TBE0 894 aaKnown RBP20.33■□□□□ 0.84
TRAF3-204ENST00000539721 GNAI3P08754 354 aa20.32■□□□□ 0.84
TRAF3-204ENST00000539721 MAP3K15Q6ZN16 1313 aa20.31■□□□□ 0.84
TRAF3-204ENST00000539721 APBA3O96018 575 aa20.31■□□□□ 0.84
TRAF3-204ENST00000539721 SLC27A3Q5K4L6 730 aa20.31■□□□□ 0.84
TRAF3-204ENST00000539721 RC3H1Q5TC82 1133 aaKnown RBP20.31■□□□□ 0.84
TRAF3-204ENST00000539721 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
TRAF3-204ENST00000539721 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
TRAF3-204ENST00000539721 USP44Q9H0E7 712 aa20.31■□□□□ 0.84
TRAF3-204ENST00000539721 COL15A1P39059 1388 aa20.3■□□□□ 0.84
TRAF3-204ENST00000539721 NEURL1BA8MQ27 555 aa20.3■□□□□ 0.84
TRAF3-204ENST00000539721 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
TRAF3-204ENST00000539721 NUP98P52948 1817 aa20.29■□□□□ 0.84
TRAF3-204ENST00000539721 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
TRAF3-204ENST00000539721 UBTFL1P0CB47 393 aaPredicted RBP20.29■□□□□ 0.84
TRAF3-204ENST00000539721 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
TRAF3-204ENST00000539721 ATP5J2-PTCD1G3V325 749 aa20.29■□□□□ 0.84
TRAF3-204ENST00000539721 PLSCR1O15162 318 aa20.29■□□□□ 0.84
TRAF3-204ENST00000539721 GNAI2P04899 355 aa20.29■□□□□ 0.84
TRAF3-204ENST00000539721 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
TRAF3-204ENST00000539721 TXNRD1Q16881 649 aa20.28■□□□□ 0.84
TRAF3-204ENST00000539721 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
TRAF3-204ENST00000539721 RGPD3A6NKT7 1758 aaPredicted RBP20.28■□□□□ 0.84
TRAF3-204ENST00000539721 RGPD4Q7Z3J3 1758 aa20.28■□□□□ 0.84
TRAF3-204ENST00000539721 IBTKQ9P2D0 1353 aaPredicted RBP20.28■□□□□ 0.84
TRAF3-204ENST00000539721 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
TRAF3-204ENST00000539721 A0A087WZG4 1122 aa20.27■□□□□ 0.84
TRAF3-204ENST00000539721 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
TRAF3-204ENST00000539721 GNPATO15228 680 aa20.27■□□□□ 0.84
TRAF3-204ENST00000539721 RPS6KA4O75676 772 aa20.27■□□□□ 0.84
TRAF3-204ENST00000539721 IGHDP01880 384 aa20.27■□□□□ 0.84
TRAF3-204ENST00000539721 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.84
TRAF3-204ENST00000539721 CENPQQ7L2Z9 268 aaPredicted RBP20.27■□□□□ 0.84
TRAF3-204ENST00000539721 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.83
TRAF3-204ENST00000539721 NBPF7P0C2Y1 421 aaPredicted RBP20.26■□□□□ 0.83
TRAF3-204ENST00000539721 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
TRAF3-204ENST00000539721 GCKRQ14397 625 aa20.26■□□□□ 0.83
TRAF3-204ENST00000539721 HLFQ16534 295 aa20.26■□□□□ 0.83
TRAF3-204ENST00000539721 AK7Q96M32 723 aa20.26■□□□□ 0.83
TRAF3-204ENST00000539721 GRM8O00222 908 aa20.26■□□□□ 0.83
TRAF3-204ENST00000539721 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
TRAF3-204ENST00000539721 RTCBQ9Y3I0 505 aaKnown RBP20.26■□□□□ 0.83
TRAF3-204ENST00000539721 HMGB2P26583 209 aaKnown RBP20.25■□□□□ 0.83
TRAF3-204ENST00000539721 HDAC1Q13547 482 aaPredicted RBP20.25■□□□□ 0.83
TRAF3-204ENST00000539721 LRRFIP2Q9Y608 721 aaKnown RBP20.25■□□□□ 0.83
TRAF3-204ENST00000539721 RPAP2Q8IXW5 612 aaPredicted RBP20.24■□□□□ 0.83
TRAF3-204ENST00000539721 PROM2Q8N271 834 aa20.24■□□□□ 0.83
TRAF3-204ENST00000539721 ISCA1Q9BUE6 129 aa20.24■□□□□ 0.83
TRAF3-204ENST00000539721 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
TRAF3-204ENST00000539721 UTYO14607 1347 aa20.24■□□□□ 0.83
TRAF3-204ENST00000539721 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
TRAF3-204ENST00000539721 SCN7AQ01118 1682 aa20.24■□□□□ 0.83
TRAF3-204ENST00000539721 CAMTA2O94983 1202 aa20.23■□□□□ 0.83
TRAF3-204ENST00000539721 CEP85Q6P2H3 762 aa20.23■□□□□ 0.83
TRAF3-204ENST00000539721 ANKRD44Q8N8A2 993 aa20.23■□□□□ 0.83
TRAF3-204ENST00000539721 CCDC191Q8NCU4 936 aa20.23■□□□□ 0.83
TRAF3-204ENST00000539721 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
TRAF3-204ENST00000539721 C4AP0C0L4 1744 aa20.22■□□□□ 0.83
TRAF3-204ENST00000539721 TRIM28Q13263 835 aaKnown RBP20.21■□□□□ 0.83
TRAF3-204ENST00000539721 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
TRAF3-204ENST00000539721 SIRT2Q8IXJ6 389 aa20.21■□□□□ 0.83
TRAF3-204ENST00000539721 GPTP24298 496 aa20.21■□□□□ 0.83
TRAF3-204ENST00000539721 ZNF652Q9Y2D9 606 aa20.21■□□□□ 0.83
TRAF3-204ENST00000539721 PHF14O94880 888 aa20.2■□□□□ 0.82
TRAF3-204ENST00000539721 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
TRAF3-204ENST00000539721 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
TRAF3-204ENST00000539721 AMIGO3Q86WK7 504 aa20.19■□□□□ 0.82
TRAF3-204ENST00000539721 JARID2Q92833 1246 aaPredicted RBP20.19■□□□□ 0.82
TRAF3-204ENST00000539721 SUCLG2Q96I99 432 aa20.19■□□□□ 0.82
TRAF3-204ENST00000539721 NARFQ9UHQ1 456 aa20.19■□□□□ 0.82
TRAF3-204ENST00000539721 HMMRO75330 724 aa20.18■□□□□ 0.82
TRAF3-204ENST00000539721 ATP8B2P98198 1209 aa20.18■□□□□ 0.82
TRAF3-204ENST00000539721 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
TRAF3-204ENST00000539721 NLRP10Q86W26 655 aa20.18■□□□□ 0.82
TRAF3-204ENST00000539721 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
TRAF3-204ENST00000539721 H7C1W4 665 aa20.18■□□□□ 0.82
TRAF3-204ENST00000539721 ZPR1O75312 459 aa20.18■□□□□ 0.82
TRAF3-204ENST00000539721 ZNF34Q8IZ26 560 aa20.18■□□□□ 0.82
TRAF3-204ENST00000539721 ADRA2BP18089 450 aa20.17■□□□□ 0.82
TRAF3-204ENST00000539721 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
TRAF3-204ENST00000539721 RGL2O15211 777 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms