RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 GDPD2Q9HCC8 539 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 ECHDC1Q9NTX5 307 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 CYP46A1Q9Y6A2 500 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 CCDC171Q6TFL3 1326 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 RASEFQ8IZ41 740 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 MYRIPQ8NFW9 859 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 CNPY2Q9Y2B0 182 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 ADCY5O95622 1261 aa15.86■□□□□ 0.13
UBE3B-209ENST00000539584 NBPF7P0C2Y1 421 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-209ENST00000539584 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
UBE3B-209ENST00000539584 PDCP20941 246 aa15.86■□□□□ 0.13
UBE3B-209ENST00000539584 PSMA5P28066 241 aa15.86■□□□□ 0.13
UBE3B-209ENST00000539584 CWC27Q6UX04 472 aaKnown RBP15.86■□□□□ 0.13
UBE3B-209ENST00000539584 SNRKQ9NRH2 765 aa15.86■□□□□ 0.13
UBE3B-209ENST00000539584 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
UBE3B-209ENST00000539584 USP25Q9UHP3 1055 aa15.86■□□□□ 0.13
UBE3B-209ENST00000539584 OVOS2A0A0G2JMS6 1433 aa15.86■□□□□ 0.13
UBE3B-209ENST00000539584 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.13
UBE3B-209ENST00000539584 ANKRD1Q15327 319 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 IP6K1Q92551 441 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 FUCA2Q9BTY2 467 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 ALDH8A1Q9H2A2 487 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-209ENST00000539584 SPTLC3Q9NUV7 552 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 FAM13BQ9NYF5 915 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 DBF4Q9UBU7 674 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-209ENST00000539584 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 OS9Q13438 667 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-209ENST00000539584 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.13
UBE3B-209ENST00000539584 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 ABTB2Q8N961 1025 aa15.85■□□□□ 0.13
UBE3B-209ENST00000539584 ELP1O95163 1332 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 KDM3BQ7LBC6 1761 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 GOLGA6L6A8MZA4 724 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 GJB2P29033 226 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 NCAPD2Q15021 1401 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 NECTIN1Q15223 517 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 THEMISQ8N1K5 641 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-209ENST00000539584 ZMYND15Q9H091 742 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 MTMR6Q9Y217 621 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 MARF1Q9Y4F3 1742 aaKnown RBP15.84■□□□□ 0.13
UBE3B-209ENST00000539584 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
UBE3B-209ENST00000539584 IFIT2P09913 472 aaKnown RBP15.83■□□□□ 0.12
UBE3B-209ENST00000539584 CCDC192P0DO97 292 aa15.83■□□□□ 0.12
UBE3B-209ENST00000539584 AMOTQ4VCS5 1084 aa15.83■□□□□ 0.12
UBE3B-209ENST00000539584 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.12
UBE3B-209ENST00000539584 CHPF2Q9P2E5 772 aa15.83■□□□□ 0.12
UBE3B-209ENST00000539584 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-209ENST00000539584 HCLS1P14317 486 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-209ENST00000539584 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
UBE3B-209ENST00000539584 FOXD4L6Q3SYB3 417 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-209ENST00000539584 RNF20Q5VTR2 975 aa15.82■□□□□ 0.12
UBE3B-209ENST00000539584 FOXD4L3Q6VB84 417 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-209ENST00000539584 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
UBE3B-209ENST00000539584 KRT85P78386 507 aa15.82■□□□□ 0.12
UBE3B-209ENST00000539584 RBM10P98175 930 aaKnown RBP15.82■□□□□ 0.12
UBE3B-209ENST00000539584 TEFQ10587 303 aa15.82■□□□□ 0.12
UBE3B-209ENST00000539584 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
UBE3B-209ENST00000539584 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
UBE3B-209ENST00000539584 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
UBE3B-209ENST00000539584 RGPD8O14715 1765 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-209ENST00000539584 ADCY9O60503 1353 aa15.81■□□□□ 0.12
UBE3B-209ENST00000539584 FIBPO43427 364 aa15.81■□□□□ 0.12
UBE3B-209ENST00000539584 PLEKHO1Q53GL0 409 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-209ENST00000539584 KSR2Q6VAB6 950 aa15.81■□□□□ 0.12
UBE3B-209ENST00000539584 MAP4K1Q92918 833 aa15.81■□□□□ 0.12
UBE3B-209ENST00000539584 C9orf78Q9NZ63 289 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-209ENST00000539584 UTYO14607 1347 aa15.81■□□□□ 0.12
UBE3B-209ENST00000539584 CCDC83Q8IWF9 413 aa15.8■□□□□ 0.12
UBE3B-209ENST00000539584 LMTK3Q96Q04 1460 aa15.8■□□□□ 0.12
UBE3B-209ENST00000539584 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
UBE3B-209ENST00000539584 PRPF40BQ6NWY9 871 aaKnown RBP15.8■□□□□ 0.12
UBE3B-209ENST00000539584 SCAND2PQ9GZW5 306 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-209ENST00000539584 HMG20BQ9P0W2 317 aa15.8■□□□□ 0.12
UBE3B-209ENST00000539584 LMO7Q8WWI1 1683 aa15.8■□□□□ 0.12
UBE3B-209ENST00000539584 PHRF1Q9P1Y6 1649 aaKnown RBP15.79■□□□□ 0.12
UBE3B-209ENST00000539584 DNM1Q05193 864 aaKnown RBP15.79■□□□□ 0.12
UBE3B-209ENST00000539584 TSGA10IPQ3SY00 556 aa15.79■□□□□ 0.12
UBE3B-209ENST00000539584 TCHHQ07283 1943 aa15.79■□□□□ 0.12
UBE3B-209ENST00000539584 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
UBE3B-209ENST00000539584 CAVIN2O95810 425 aa15.78■□□□□ 0.12
UBE3B-209ENST00000539584 PTH1RQ03431 593 aa15.78■□□□□ 0.12
UBE3B-209ENST00000539584 CREB3L3Q68CJ9 461 aa15.78■□□□□ 0.12
UBE3B-209ENST00000539584 FAM200AQ8TCP9 573 aa15.78■□□□□ 0.12
UBE3B-209ENST00000539584 DDX58O95786 925 aaKnown RBP15.78■□□□□ 0.12
UBE3B-209ENST00000539584 LARP1BQ659C4 914 aaKnown RBP15.78■□□□□ 0.12
UBE3B-209ENST00000539584 LINS1Q8NG48 757 aa15.78■□□□□ 0.12
UBE3B-209ENST00000539584 LTV1Q96GA3 475 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-209ENST00000539584 CHAF1AQ13111 956 aaPredicted RBP15.77■□□□□ 0.12
UBE3B-209ENST00000539584 ME3Q16798 604 aa15.77■□□□□ 0.12
UBE3B-209ENST00000539584 ADCK5Q3MIX3 580 aa15.77■□□□□ 0.12
UBE3B-209ENST00000539584 PKNOX2Q96KN3 472 aa15.77■□□□□ 0.12
UBE3B-209ENST00000539584 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
UBE3B-209ENST00000539584 NFAT5O94916 1531 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 LARGE1O95461 756 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 KCNJ4P48050 445 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.11
UBE3B-209ENST00000539584 KRT32Q14532 448 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 MAP3K11Q16584 847 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 GIMAP6Q6P9H5 292 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 449.4 ms