RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DNM1Q05193 864 aaKnown RBP24.38■■□□□ 1.49
TMEM260-203ENST00000539559 CHMP3Q9Y3E7 222 aa24.38■■□□□ 1.49
TMEM260-203ENST00000539559 ADCK5Q3MIX3 580 aa24.38■■□□□ 1.49
TMEM260-203ENST00000539559 MAP7D2Q96T17 732 aa24.38■■□□□ 1.49
TMEM260-203ENST00000539559 USP54Q70EL1 1684 aa24.37■■□□□ 1.49
TMEM260-203ENST00000539559 F13A1P00488 732 aa24.37■■□□□ 1.49
TMEM260-203ENST00000539559 IL17RAQ96F46 866 aa24.37■■□□□ 1.49
TMEM260-203ENST00000539559 LIMCH1Q9UPQ0 1083 aa24.37■■□□□ 1.49
TMEM260-203ENST00000539559 KDRP35968 1356 aa24.37■■□□□ 1.49
TMEM260-203ENST00000539559 PTH1RQ03431 593 aa24.36■■□□□ 1.49
TMEM260-203ENST00000539559 PIBF1Q8WXW3 757 aa24.36■■□□□ 1.49
TMEM260-203ENST00000539559 UBE2HP62256 183 aa24.36■■□□□ 1.49
TMEM260-203ENST00000539559 TMEM87AQ8NBN3 555 aa24.36■■□□□ 1.49
TMEM260-203ENST00000539559 FAM208AQ9UK61 1670 aaKnown RBP24.36■■□□□ 1.49
TMEM260-203ENST00000539559 GJB2P29033 226 aa24.35■■□□□ 1.49
TMEM260-203ENST00000539559 FAM184AQ8NB25 1140 aa24.35■■□□□ 1.49
TMEM260-203ENST00000539559 COL9A3Q14050 684 aaPredicted RBP24.35■■□□□ 1.49
TMEM260-203ENST00000539559 SPC24Q8NBT2 197 aa24.35■■□□□ 1.49
TMEM260-203ENST00000539559 HOXC9P31274 260 aa24.34■■□□□ 1.49
TMEM260-203ENST00000539559 NECAB1Q8N987 351 aa24.34■■□□□ 1.49
TMEM260-203ENST00000539559 MYRIPQ8NFW9 859 aa24.34■■□□□ 1.49
TMEM260-203ENST00000539559 MARF1Q9Y4F3 1742 aaKnown RBP24.34■■□□□ 1.49
TMEM260-203ENST00000539559 UVSSAQ2YD98 709 aa24.34■■□□□ 1.49
TMEM260-203ENST00000539559 CNTROBQ8N137 903 aa24.34■■□□□ 1.49
TMEM260-203ENST00000539559 AOX1Q06278 1338 aa24.34■■□□□ 1.49
TMEM260-203ENST00000539559 VPS37CA5D8V6 355 aaPredicted RBP24.33■■□□□ 1.49
TMEM260-203ENST00000539559 TAF7Q15545 349 aaPredicted RBP24.33■■□□□ 1.49
TMEM260-203ENST00000539559 PRPF40BQ6NWY9 871 aaKnown RBP24.33■■□□□ 1.49
TMEM260-203ENST00000539559 JAKMIP1Q96N16 626 aaKnown RBP24.33■■□□□ 1.49
TMEM260-203ENST00000539559 KDM4AO75164 1064 aa24.33■■□□□ 1.48
TMEM260-203ENST00000539559 OS9Q13438 667 aaPredicted RBP24.33■■□□□ 1.48
TMEM260-203ENST00000539559 POLA2Q14181 598 aa24.33■■□□□ 1.48
TMEM260-203ENST00000539559 FAM173BQ6P4H8 233 aa24.32■■□□□ 1.48
TMEM260-203ENST00000539559 ORAI2Q96SN7 254 aa24.32■■□□□ 1.48
TMEM260-203ENST00000539559 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.32■■□□□ 1.48
TMEM260-203ENST00000539559 ZNF710Q8N1W2 664 aa24.32■■□□□ 1.48
TMEM260-203ENST00000539559 KIF1BPQ96EK5 621 aa24.32■■□□□ 1.48
TMEM260-203ENST00000539559 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
TMEM260-203ENST00000539559 C19orf44Q9H6X5 657 aa24.31■■□□□ 1.48
TMEM260-203ENST00000539559 RAB11FIP3O75154 756 aa24.31■■□□□ 1.48
TMEM260-203ENST00000539559 CHPF2Q9P2E5 772 aa24.31■■□□□ 1.48
TMEM260-203ENST00000539559 PI4KAP2A4QPH2 592 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 KCNQ3O43525 872 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 ST3GAL1Q11201 340 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 FERMT3Q86UX7 667 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 PI4KAP1Q8N8J0 262 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 MTMR6Q9Y217 621 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 FUCA2Q9BTY2 467 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 DIAPH3Q9NSV4 1193 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 PYCARDQ9ULZ3 195 aa24.3■■□□□ 1.48
TMEM260-203ENST00000539559 TCEANC2Q96MN5 208 aa24.29■■□□□ 1.48
TMEM260-203ENST00000539559 PDRG1Q9NUG6 133 aa24.29■■□□□ 1.48
TMEM260-203ENST00000539559 PA2G4Q9UQ80 394 aaKnown RBP24.29■■□□□ 1.48
TMEM260-203ENST00000539559 MAP3K5Q99683 1374 aa24.29■■□□□ 1.48
TMEM260-203ENST00000539559 CAMK4Q16566 473 aa24.28■■□□□ 1.48
TMEM260-203ENST00000539559 KCNH5Q8NCM2 988 aa24.28■■□□□ 1.48
TMEM260-203ENST00000539559 KCNF1Q9H3M0 494 aa24.28■■□□□ 1.48
TMEM260-203ENST00000539559 PRDM4Q9UKN5 801 aa24.28■■□□□ 1.48
TMEM260-203ENST00000539559 LGR6Q9HBX8 967 aa24.28■■□□□ 1.48
TMEM260-203ENST00000539559 ME3Q16798 604 aa24.27■■□□□ 1.48
TMEM260-203ENST00000539559 HTATSF1O43719 755 aaKnown RBP24.26■■□□□ 1.47
TMEM260-203ENST00000539559 LETM1O95202 739 aaPredicted RBP24.25■■□□□ 1.47
TMEM260-203ENST00000539559 BEND3Q5T5X7 828 aa24.25■■□□□ 1.47
TMEM260-203ENST00000539559 DNAAF4Q8WXU2 420 aa24.24■■□□□ 1.47
TMEM260-203ENST00000539559 IP6K1Q92551 441 aa24.24■■□□□ 1.47
TMEM260-203ENST00000539559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.24■■□□□ 1.47
TMEM260-203ENST00000539559 MTERF4Q7Z6M4 381 aaKnown RBP24.24■■□□□ 1.47
TMEM260-203ENST00000539559 ATP6V1DQ9Y5K8 247 aa24.24■■□□□ 1.47
TMEM260-203ENST00000539559 C1orf167Q5SNV9 1468 aa24.23■■□□□ 1.47
TMEM260-203ENST00000539559 EPB41L2O43491 1005 aaKnown RBP24.23■■□□□ 1.47
TMEM260-203ENST00000539559 PRIMPOLQ96LW4 560 aa24.23■■□□□ 1.47
TMEM260-203ENST00000539559 FAM227BQ96M60 508 aa24.23■■□□□ 1.47
TMEM260-203ENST00000539559 TPCN1Q9ULQ1 816 aa24.23■■□□□ 1.47
TMEM260-203ENST00000539559 NFAT5O94916 1531 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 LIG1P18858 919 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 CDC37L1Q7L3B6 337 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 TTC6Q86TZ1 520 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 CYP46A1Q9Y6A2 500 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 GLRX3O76003 335 aaKnown RBP24.22■■□□□ 1.47
TMEM260-203ENST00000539559 ATF3P18847 181 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 CKAP2LQ8IYA6 745 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 CCDC94Q9BW85 323 aaPredicted RBP24.22■■□□□ 1.47
TMEM260-203ENST00000539559 SPTLC3Q9NUV7 552 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 TAF6LQ9Y6J9 622 aa24.22■■□□□ 1.47
TMEM260-203ENST00000539559 KCNJ4P48050 445 aa24.21■■□□□ 1.47
TMEM260-203ENST00000539559 CBX1P83916 185 aa24.21■■□□□ 1.47
TMEM260-203ENST00000539559 LRRC37A3O60309 1634 aa24.21■■□□□ 1.47
TMEM260-203ENST00000539559 TMEM94Q12767 1356 aa24.21■■□□□ 1.47
TMEM260-203ENST00000539559 LUZP1Q86V48 1076 aa24.21■■□□□ 1.47
TMEM260-203ENST00000539559 HSPA2P54652 639 aa24.2■■□□□ 1.47
TMEM260-203ENST00000539559 KRT28Q7Z3Y7 464 aa24.2■■□□□ 1.47
TMEM260-203ENST00000539559 CLASRPQ8N2M8 674 aaKnown RBP24.2■■□□□ 1.47
TMEM260-203ENST00000539559 TFIP11Q9UBB9 837 aaKnown RBP24.2■■□□□ 1.47
TMEM260-203ENST00000539559 PXDNLA1KZ92 1463 aa24.2■■□□□ 1.46
TMEM260-203ENST00000539559 LTN1O94822 1766 aa24.2■■□□□ 1.46
TMEM260-203ENST00000539559 EIF4A1P60842 406 aaKnown RBP24.2■■□□□ 1.46
TMEM260-203ENST00000539559 HMGN5P82970 282 aaKnown RBP24.2■■□□□ 1.46
TMEM260-203ENST00000539559 VPS53Q5VIR6 699 aa24.2■■□□□ 1.46
TMEM260-203ENST00000539559 LARP1BQ659C4 914 aaKnown RBP24.2■■□□□ 1.46
TMEM260-203ENST00000539559 KIAA1524Q8TCG1 905 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms