RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
CACNB1-206ENST00000539338 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 PI4KAP2A4QPH2 592 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 MINDY4BA8MYZ0 360 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 C8orf34Q49A92 452 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 LEKR1Q6ZMV7 388 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 PI4KAP1Q8N8J0 262 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 ITSN2Q9NZM3 1697 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 HYPKQ9NX55 129 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 TRAPPC8Q9Y2L5 1435 aa16.95■□□□□ 0.3
CACNB1-206ENST00000539338 STX6O43752 255 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 SDSP20132 328 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
CACNB1-206ENST00000539338 EVI5LQ96CN4 794 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 ATP10BO94823 1461 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 RRP9O43818 475 aaKnown RBP16.94■□□□□ 0.3
CACNB1-206ENST00000539338 ANO10Q9NW15 660 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 SFPQP23246 707 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNB1-206ENST00000539338 SLF2Q8IX21 1173 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 PDCL2Q8N4E4 241 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 ANKIB1Q9P2G1 1089 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 ACEP12821 1306 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
CACNB1-206ENST00000539338 KDM6BO15054 1643 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 IL2RBP14784 551 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 SYCP1Q15431 976 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 NAPBQ9H115 298 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 PTPN14Q15678 1187 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 KLHL10Q6JEL2 608 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 DPY19L2Q6NUT2 758 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
CACNB1-206ENST00000539338 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
CACNB1-206ENST00000539338 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
CACNB1-206ENST00000539338 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
CACNB1-206ENST00000539338 MYO6Q9UM54 1294 aa16.92■□□□□ 0.3
CACNB1-206ENST00000539338 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
CACNB1-206ENST00000539338 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
CACNB1-206ENST00000539338 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
CACNB1-206ENST00000539338 EPB41L2O43491 1005 aaKnown RBP16.92■□□□□ 0.3
CACNB1-206ENST00000539338 ERLIN1O75477 346 aa16.92■□□□□ 0.3
CACNB1-206ENST00000539338 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
CACNB1-206ENST00000539338 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
CACNB1-206ENST00000539338 ACSBG1Q96GR2 724 aa16.92■□□□□ 0.3
CACNB1-206ENST00000539338 GOLIM4O00461 696 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 RLBP1P12271 317 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 UBXN4Q92575 508 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 ARHGAP45Q92619 1136 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 TMX3Q96JJ7 454 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 CEP131Q9UPN4 1083 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 C6orf229H3BNL8 230 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 ZNF213O14771 459 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
CACNB1-206ENST00000539338 ARHGAP29Q52LW3 1261 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 KLHL40Q2TBA0 621 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 LUC7LQ9NQ29 371 aaKnown RBP16.91■□□□□ 0.3
CACNB1-206ENST00000539338 GOLGA8BA8MQT2 603 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 TSPYL1Q9H0U9 437 aa16.91■□□□□ 0.3
CACNB1-206ENST00000539338 FAM193AP78312 1265 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 SNRKQ9NRH2 765 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 PIK3R4Q99570 1358 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 USP5P45974 858 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 ARHGEF6Q15052 776 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 FSIP1Q8NA03 581 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 TMEM87AQ8NBN3 555 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 NBPF6Q5VWK0 638 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
CACNB1-206ENST00000539338 NBPF4Q96M43 638 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
CACNB1-206ENST00000539338 ADCY5O95622 1261 aa16.89■□□□□ 0.3
CACNB1-206ENST00000539338 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.3
CACNB1-206ENST00000539338 UBE3BQ7Z3V4 1068 aa16.89■□□□□ 0.3
CACNB1-206ENST00000539338 MRPL50Q8N5N7 158 aaKnown RBP16.89■□□□□ 0.3
CACNB1-206ENST00000539338 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.3
CACNB1-206ENST00000539338 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 OGFOD1Q8N543 542 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 TESK2Q96S53 571 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 SETDB2Q96T68 719 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
CACNB1-206ENST00000539338 CFAP74Q9C0B2 1584 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 FAM98CQ17RN3 349 aaKnown RBP16.89■□□□□ 0.29
CACNB1-206ENST00000539338 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
CACNB1-206ENST00000539338 BIN1O00499 593 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 GPTP24298 496 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 RAB11FIP4Q86YS3 637 aa16.89■□□□□ 0.29
CACNB1-206ENST00000539338 BMP2KQ9NSY1 1161 aaPredicted RBP16.89■□□□□ 0.29
CACNB1-206ENST00000539338 PDE1AP54750 535 aa16.88■□□□□ 0.29
CACNB1-206ENST00000539338 HAND2P61296 217 aa16.88■□□□□ 0.29
CACNB1-206ENST00000539338 KIAA1328Q86T90 577 aa16.88■□□□□ 0.29
CACNB1-206ENST00000539338 C16orf45Q96MC5 204 aaPredicted RBP16.88■□□□□ 0.29
CACNB1-206ENST00000539338 DDX19AQ9NUU7 478 aaKnown RBP16.88■□□□□ 0.29
CACNB1-206ENST00000539338 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms