RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 CCDC112Q8NEF3 446 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 TM6SF1Q9BZW5 370 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 TRIM5Q9C035 493 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 CBX8Q9HC52 389 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 DDX41Q9UJV9 622 aaKnown RBP20.48■□□□□ 0.87
C2CD3-213ENST00000539061 CYP46A1Q9Y6A2 500 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 C3P01024 1663 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 ZSCAN25Q6NSZ9 544 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 JAKMIP1Q96N16 626 aaKnown RBP20.47■□□□□ 0.87
C2CD3-213ENST00000539061 TNMDQ9H2S6 317 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 TTC21BQ7Z4L5 1316 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 LIG1P18858 919 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 ZNF75DP51815 510 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 RUFY2Q8WXA3 655 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 ANO6Q4KMQ2 910 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 LARP1BQ659C4 914 aaKnown RBP20.47■□□□□ 0.87
C2CD3-213ENST00000539061 PPP1R42Q7Z4L9 355 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 PLA2G4DQ86XP0 818 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 ZSWIM6Q9HCJ5 1215 aa20.47■□□□□ 0.87
C2CD3-213ENST00000539061 NRBP1Q9UHY1 535 aa20.46■□□□□ 0.87
C2CD3-213ENST00000539061 AGLP35573 1532 aa20.46■□□□□ 0.87
C2CD3-213ENST00000539061 POLA2Q14181 598 aa20.46■□□□□ 0.87
C2CD3-213ENST00000539061 CCDC171Q6TFL3 1326 aa20.45■□□□□ 0.86
C2CD3-213ENST00000539061 CKAP2LQ8IYA6 745 aa20.45■□□□□ 0.86
C2CD3-213ENST00000539061 NECTIN2Q92692 538 aa20.45■□□□□ 0.86
C2CD3-213ENST00000539061 GOLGA6L4A6NEF3 574 aa20.45■□□□□ 0.86
C2CD3-213ENST00000539061 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
C2CD3-213ENST00000539061 TDRD7Q8NHU6 1098 aaKnown RBP20.45■□□□□ 0.86
C2CD3-213ENST00000539061 DDX19AQ9NUU7 478 aaKnown RBP20.45■□□□□ 0.86
C2CD3-213ENST00000539061 MORC2Q9Y6X9 1032 aaPredicted RBP20.45■□□□□ 0.86
C2CD3-213ENST00000539061 MAP3K19Q56UN5 1328 aa20.45■□□□□ 0.86
C2CD3-213ENST00000539061 DTNBO60941 627 aa20.44■□□□□ 0.86
C2CD3-213ENST00000539061 ME3Q16798 604 aa20.44■□□□□ 0.86
C2CD3-213ENST00000539061 TPD52L1Q16890 204 aaPredicted RBP20.44■□□□□ 0.86
C2CD3-213ENST00000539061 ADCK5Q3MIX3 580 aa20.44■□□□□ 0.86
C2CD3-213ENST00000539061 DACT1Q9NYF0 836 aa20.44■□□□□ 0.86
C2CD3-213ENST00000539061 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
C2CD3-213ENST00000539061 PDCP20941 246 aa20.44■□□□□ 0.86
C2CD3-213ENST00000539061 ST3GAL1Q11201 340 aa20.44■□□□□ 0.86
C2CD3-213ENST00000539061 PRPF40BQ6NWY9 871 aaKnown RBP20.44■□□□□ 0.86
C2CD3-213ENST00000539061 KCNB2Q92953 911 aa20.43■□□□□ 0.86
C2CD3-213ENST00000539061 SCAND2PQ9GZW5 306 aaPredicted RBP20.43■□□□□ 0.86
C2CD3-213ENST00000539061 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
C2CD3-213ENST00000539061 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
C2CD3-213ENST00000539061 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
C2CD3-213ENST00000539061 GLRX3O76003 335 aaKnown RBP20.42■□□□□ 0.86
C2CD3-213ENST00000539061 PTH1RQ03431 593 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 RBM43Q6ZSC3 357 aaKnown RBP20.42■□□□□ 0.86
C2CD3-213ENST00000539061 NECAB1Q8N987 351 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 AKAP12Q02952 1782 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 CLIP2Q9UDT6 1046 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 TTC21AQ8NDW8 1320 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 RGPD1P0DJD0 1748 aa20.42■□□□□ 0.86
C2CD3-213ENST00000539061 SRGAP3O43295 1099 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 ZKSCAN1P17029 563 aaPredicted RBP20.41■□□□□ 0.86
C2CD3-213ENST00000539061 NAA30Q147X3 362 aaPredicted RBP20.41■□□□□ 0.86
C2CD3-213ENST00000539061 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 KIF18AQ8NI77 898 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 HSP90AB4PQ58FF6 505 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 CEP135Q66GS9 1140 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 CACTINQ8WUQ7 758 aaKnown RBP20.41■□□□□ 0.86
C2CD3-213ENST00000539061 CLSTN2Q9H4D0 955 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 TTC41PQ6P2S7 1318 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
C2CD3-213ENST00000539061 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
C2CD3-213ENST00000539061 SLFN14P0C7P3 912 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 ZNF165P49910 485 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 SPATA32Q96LK8 384 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 USP42Q9H9J4 1324 aaKnown RBP20.4■□□□□ 0.86
C2CD3-213ENST00000539061 SPATA31D1Q6ZQQ2 1576 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
C2CD3-213ENST00000539061 ITSN1Q15811 1721 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 PRR36Q9H6K5 1346 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 FAM173BQ6P4H8 233 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 CDC25BP30305 580 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 SIRT1Q96EB6 747 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 TPCN1Q9ULQ1 816 aa20.4■□□□□ 0.86
C2CD3-213ENST00000539061 A2ML1A8K2U0 1454 aa20.39■□□□□ 0.86
C2CD3-213ENST00000539061 CAVIN2O95810 425 aa20.39■□□□□ 0.85
C2CD3-213ENST00000539061 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
C2CD3-213ENST00000539061 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
C2CD3-213ENST00000539061 KRT222Q8N1A0 295 aa20.38■□□□□ 0.85
C2CD3-213ENST00000539061 ZNF397Q8NF99 534 aaPredicted RBP20.38■□□□□ 0.85
C2CD3-213ENST00000539061 ZNF592Q92610 1267 aa20.38■□□□□ 0.85
C2CD3-213ENST00000539061 METP08581 1390 aa20.38■□□□□ 0.85
C2CD3-213ENST00000539061 NEMFO60524 1076 aa20.38■□□□□ 0.85
C2CD3-213ENST00000539061 FGD1P98174 961 aa20.38■□□□□ 0.85
C2CD3-213ENST00000539061 FAM208AQ9UK61 1670 aaKnown RBP20.37■□□□□ 0.85
C2CD3-213ENST00000539061 LEO1Q8WVC0 666 aaPredicted RBP20.37■□□□□ 0.85
C2CD3-213ENST00000539061 DNAJC25Q9H1X3 360 aa20.37■□□□□ 0.85
C2CD3-213ENST00000539061 PEAK1Q9H792 1746 aa20.37■□□□□ 0.85
C2CD3-213ENST00000539061 CCDC144BQ3MJ40 725 aa20.37■□□□□ 0.85
C2CD3-213ENST00000539061 CCDC144CPQ8IYA2 1237 aa20.37■□□□□ 0.85
C2CD3-213ENST00000539061 TFIP11Q9UBB9 837 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms