RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 CETN2P41208 172 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 MPRIPQ6WCQ1 1025 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 YEATS4O95619 227 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 TRMT1LQ7Z2T5 733 aaKnown RBP16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 NME9Q86XW9 330 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 ANKIB1Q9P2G1 1089 aa16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 SCLT1Q96NL6 688 aa16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 PLB1Q6P1J6 1458 aa16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 USO1O60763 962 aaKnown RBP16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 TNIP1Q15025 636 aa16.4■□□□□ 0.22
PLXNB3-209ENST00000538966 EMILIN1Q9Y6C2 1016 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 CCDC196A0A1B0GTZ2 297 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 TRIM27P14373 513 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 PAFAH1B1P43034 410 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 CTAGE5O15320 804 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 STX6O43752 255 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 STX1AQ16623 288 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 MAP3K12Q12852 859 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 ZNF444Q8N0Y2 327 aaPredicted RBP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 ZNF830Q96NB3 372 aaPredicted RBP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 HAND2P61296 217 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 TMOD3Q9NYL9 352 aa16.39■□□□□ 0.21
PLXNB3-209ENST00000538966 ZHX1Q9UKY1 873 aaPredicted RBP16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 TMCO5BA8MYB1 307 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 MCM3P25205 808 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 ZNF287Q9HBT7 754 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 CD109Q6YHK3 1445 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 DNAAF4Q8WXU2 420 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 PHAXQ9H814 394 aaKnown RBP16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 CCDC194A0A1B0GVG4 234 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 TMEM87AQ8NBN3 555 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 GOLIM4O00461 696 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 TMOD2Q9NZR1 351 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
PLXNB3-209ENST00000538966 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 TMEM266Q2M3C6 531 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 DDX19AQ9NUU7 478 aaKnown RBP16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 BAG4O95429 457 aaKnown RBP16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 PRPF4BQ13523 1007 aaKnown RBP16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 ANKLE2Q86XL3 938 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 IGHDP01880 384 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 CTR9Q6PD62 1173 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 IQCA1Q86XH1 822 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 SPECC1Q5M775 1068 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 SNRKQ9NRH2 765 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
PLXNB3-209ENST00000538966 VAT1LQ9HCJ6 419 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 SLC5A1P13866 664 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 ZSCAN23Q3MJ62 389 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 TRMT112Q9UI30 125 aaKnown RBP16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 ABCC5O15440 1437 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 CEP135Q66GS9 1140 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 GCOM1H8Y6P7 765 aaPredicted RBP16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 MYZAPP0CAP1 466 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
PLXNB3-209ENST00000538966 GPTP24298 496 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 TCERG1LQ5VWI1 586 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 MAATS1Q7Z4T9 603 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 EVI5LQ96CN4 794 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 MAP3K2Q9Y2U5 619 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 LMAN1P49257 510 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 ZPR1O75312 459 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 GSDMDP57764 484 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 CCDC40Q4G0X9 1142 aa16.35■□□□□ 0.21
PLXNB3-209ENST00000538966 A0A087WZG4 1122 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 IDEP14735 1019 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 HSP90AA4PQ58FG1 418 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 NOP2P46087 812 aaKnown RBP16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 ZNF165P49910 485 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 PPP4R3AQ6IN85 833 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 RAB34Q9BZG1 259 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 FAM107BQ9H098 131 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 NECAB1Q8N987 351 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms