RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CNBD1Q8NA66 436 aa19.69■□□□□ 0.74
RAB40B-202ENST00000538809 NPHP1O15259 732 aa19.68■□□□□ 0.74
RAB40B-202ENST00000538809 NGEFQ8N5V2 710 aa19.68■□□□□ 0.74
RAB40B-202ENST00000538809 ZNF652Q9Y2D9 606 aa19.68■□□□□ 0.74
RAB40B-202ENST00000538809 H0YIN7 160 aa19.67■□□□□ 0.74
RAB40B-202ENST00000538809 LMOD3Q0VAK6 560 aa19.67■□□□□ 0.74
RAB40B-202ENST00000538809 RUNDC1Q96C34 613 aa19.67■□□□□ 0.74
RAB40B-202ENST00000538809 ZNF316A6NFI3 1004 aaPredicted RBP19.66■□□□□ 0.74
RAB40B-202ENST00000538809 RASSF7Q02833 373 aa19.66■□□□□ 0.74
RAB40B-202ENST00000538809 C9orf131Q5VYM1 1079 aa19.66■□□□□ 0.74
RAB40B-202ENST00000538809 TTLL6Q8N841 843 aa19.66■□□□□ 0.74
RAB40B-202ENST00000538809 BRIP1Q9BX63 1249 aa19.66■□□□□ 0.74
RAB40B-202ENST00000538809 ADAMTS8Q9UP79 889 aa19.66■□□□□ 0.74
RAB40B-202ENST00000538809 MYL6BP14649 208 aa19.65■□□□□ 0.74
RAB40B-202ENST00000538809 PDE6BP35913 854 aa19.65■□□□□ 0.74
RAB40B-202ENST00000538809 ST5P78524 1137 aa19.65■□□□□ 0.74
RAB40B-202ENST00000538809 HLFQ16534 295 aa19.65■□□□□ 0.74
RAB40B-202ENST00000538809 CLEC4GQ6UXB4 293 aa19.65■□□□□ 0.74
RAB40B-202ENST00000538809 ZNF622Q969S3 477 aaKnown RBP eCLIP19.65■□□□□ 0.74
RAB40B-202ENST00000538809 SENP3-EIF4A1A0A087X0R7 540 aa19.64■□□□□ 0.73
RAB40B-202ENST00000538809 FAM177BA6PVY3 158 aa19.64■□□□□ 0.73
RAB40B-202ENST00000538809 NBPF5PQ86XG9 351 aaPredicted RBP19.64■□□□□ 0.73
RAB40B-202ENST00000538809 RNF181Q9P0P0 153 aa19.64■□□□□ 0.73
RAB40B-202ENST00000538809 NIP7Q9Y221 180 aaKnown RBP eCLIP19.64■□□□□ 0.73
RAB40B-202ENST00000538809 TTLL7Q6ZT98 887 aa19.63■□□□□ 0.73
RAB40B-202ENST00000538809 ZNF219Q9P2Y4 722 aaPredicted RBP19.63■□□□□ 0.73
RAB40B-202ENST00000538809 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
RAB40B-202ENST00000538809 LAS1LQ9Y4W2 734 aaKnown RBP19.62■□□□□ 0.73
RAB40B-202ENST00000538809 MAP3K15Q6ZN16 1313 aa19.61■□□□□ 0.73
RAB40B-202ENST00000538809 EIF2S2P20042 333 aaKnown RBP19.61■□□□□ 0.73
RAB40B-202ENST00000538809 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
RAB40B-202ENST00000538809 ZBTB3Q9H5J0 574 aa19.61■□□□□ 0.73
RAB40B-202ENST00000538809 LAMB2P55268 1798 aa19.6■□□□□ 0.73
RAB40B-202ENST00000538809 KIF3CO14782 793 aa19.6■□□□□ 0.73
RAB40B-202ENST00000538809 RGL2O15211 777 aa19.6■□□□□ 0.73
RAB40B-202ENST00000538809 KRT24Q2M2I5 525 aa19.6■□□□□ 0.73
RAB40B-202ENST00000538809 BABAM1Q9NWV8 329 aa19.6■□□□□ 0.73
RAB40B-202ENST00000538809 PDZRN3Q9UPQ7 1066 aa19.6■□□□□ 0.73
RAB40B-202ENST00000538809 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
RAB40B-202ENST00000538809 ANXA1P04083 346 aa19.59■□□□□ 0.73
RAB40B-202ENST00000538809 PRELPP51888 382 aa19.59■□□□□ 0.73
RAB40B-202ENST00000538809 CCDC184Q52MB2 194 aa19.59■□□□□ 0.73
RAB40B-202ENST00000538809 NECTIN2Q92692 538 aa19.59■□□□□ 0.73
RAB40B-202ENST00000538809 ABCC12Q96J65 1359 aa19.58■□□□□ 0.73
RAB40B-202ENST00000538809 NFKBIEO00221 500 aa19.58■□□□□ 0.72
RAB40B-202ENST00000538809 C21orf2O43822 256 aa19.58■□□□□ 0.72
RAB40B-202ENST00000538809 SRGNP10124 158 aa19.58■□□□□ 0.72
RAB40B-202ENST00000538809 PROSER3Q2NL68 480 aa19.58■□□□□ 0.72
RAB40B-202ENST00000538809 NMRK2Q9NPI5 230 aa19.58■□□□□ 0.72
RAB40B-202ENST00000538809 ERVV-1B6SEH8 477 aa19.57■□□□□ 0.72
RAB40B-202ENST00000538809 GPTP24298 496 aa19.57■□□□□ 0.72
RAB40B-202ENST00000538809 STYK1Q6J9G0 422 aa19.57■□□□□ 0.72
RAB40B-202ENST00000538809 TPTE2Q6XPS3 522 aa19.57■□□□□ 0.72
RAB40B-202ENST00000538809 UBN2Q6ZU65 1347 aa19.56■□□□□ 0.72
RAB40B-202ENST00000538809 CHL1O00533 1208 aa19.56■□□□□ 0.72
RAB40B-202ENST00000538809 PDIA6Q15084 440 aa19.56■□□□□ 0.72
RAB40B-202ENST00000538809 PRPF40BQ6NWY9 871 aaKnown RBP19.56■□□□□ 0.72
RAB40B-202ENST00000538809 LRP10Q7Z4F1 713 aa19.56■□□□□ 0.72
RAB40B-202ENST00000538809 CNKSR1Q969H4 720 aa19.56■□□□□ 0.72
RAB40B-202ENST00000538809 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
RAB40B-202ENST00000538809 APAF1O14727 1248 aa19.55■□□□□ 0.72
RAB40B-202ENST00000538809 LMNB1P20700 586 aa19.55■□□□□ 0.72
RAB40B-202ENST00000538809 NUTM1Q86Y26 1132 aa19.55■□□□□ 0.72
RAB40B-202ENST00000538809 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
RAB40B-202ENST00000538809 ERFEQ4G0M1 354 aa19.53■□□□□ 0.72
RAB40B-202ENST00000538809 GIGYF2Q6Y7W6 1299 aaKnown RBP19.53■□□□□ 0.72
RAB40B-202ENST00000538809 NYXQ9GZU5 481 aa19.53■□□□□ 0.72
RAB40B-202ENST00000538809 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
RAB40B-202ENST00000538809 TAF1P21675 1872 aa19.52■□□□□ 0.72
RAB40B-202ENST00000538809 NPR1P16066 1061 aa19.52■□□□□ 0.72
RAB40B-202ENST00000538809 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
RAB40B-202ENST00000538809 DDX60Q8IY21 1712 aaKnown RBP19.51■□□□□ 0.71
RAB40B-202ENST00000538809 AIMP1Q12904 312 aaKnown RBP19.51■□□□□ 0.71
RAB40B-202ENST00000538809 SUSD4Q5VX71 490 aa19.51■□□□□ 0.71
RAB40B-202ENST00000538809 ZNF34Q8IZ26 560 aa19.51■□□□□ 0.71
RAB40B-202ENST00000538809 MBIPQ9NS73 344 aa19.51■□□□□ 0.71
RAB40B-202ENST00000538809 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
RAB40B-202ENST00000538809 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
RAB40B-202ENST00000538809 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
RAB40B-202ENST00000538809 KLRG2A4D1S0 409 aaPredicted RBP19.5■□□□□ 0.71
RAB40B-202ENST00000538809 XAGE3Q8WTP9 111 aa19.5■□□□□ 0.71
RAB40B-202ENST00000538809 CFAP44Q96MT7 982 aa19.5■□□□□ 0.71
RAB40B-202ENST00000538809 TAOK3Q9H2K8 898 aa19.5■□□□□ 0.71
RAB40B-202ENST00000538809 CHPF2Q9P2E5 772 aa19.5■□□□□ 0.71
RAB40B-202ENST00000538809 NTSR2O95665 410 aa19.49■□□□□ 0.71
RAB40B-202ENST00000538809 HDGFL1Q5TGJ6 251 aa19.49■□□□□ 0.71
RAB40B-202ENST00000538809 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
RAB40B-202ENST00000538809 COPS6Q7L5N1 327 aa19.49■□□□□ 0.71
RAB40B-202ENST00000538809 DDX21Q9NR30 783 aaKnown RBP eCLIP19.49■□□□□ 0.71
RAB40B-202ENST00000538809 LTBP3Q9NS15 1303 aa19.49■□□□□ 0.71
RAB40B-202ENST00000538809 ANP32CO43423 234 aa19.48■□□□□ 0.71
RAB40B-202ENST00000538809 ZNF853P0CG23 659 aa19.48■□□□□ 0.71
RAB40B-202ENST00000538809 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
RAB40B-202ENST00000538809 RRAGCQ9HB90 399 aa19.48■□□□□ 0.71
RAB40B-202ENST00000538809 TOMM70O94826 608 aa19.47■□□□□ 0.71
RAB40B-202ENST00000538809 HSPA6P17066 643 aa19.47■□□□□ 0.71
RAB40B-202ENST00000538809 CCDC93Q567U6 631 aa19.47■□□□□ 0.71
RAB40B-202ENST00000538809 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
RAB40B-202ENST00000538809 C7orf43Q8WVR3 580 aa19.47■□□□□ 0.71
RAB40B-202ENST00000538809 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms