RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CBX8Q9HC52 389 aa22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 CNTROBQ8N137 903 aa22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 TRIM5Q9C035 493 aa22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 CCDC171Q6TFL3 1326 aa22.08■■□□□ 1.13
SFSWAP-207ENST00000538548 METP08581 1390 aa22.08■■□□□ 1.13
SFSWAP-207ENST00000538548 RAB11FIP3O75154 756 aa22.08■■□□□ 1.13
SFSWAP-207ENST00000538548 MAP4K4O95819 1239 aaPredicted RBP22.08■■□□□ 1.13
SFSWAP-207ENST00000538548 NRBP1Q9UHY1 535 aa22.08■■□□□ 1.13
SFSWAP-207ENST00000538548 C3P01024 1663 aa22.08■■□□□ 1.13
SFSWAP-207ENST00000538548 XRN1Q8IZH2 1706 aaKnown RBP22.08■■□□□ 1.13
SFSWAP-207ENST00000538548 ANO6Q4KMQ2 910 aa22.08■■□□□ 1.12
SFSWAP-207ENST00000538548 LIG1P18858 919 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 CAMK4Q16566 473 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 TDRD7Q8NHU6 1098 aaKnown RBP22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 SSH3Q8TE77 659 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 TNMDQ9H2S6 317 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 NUTM2FA1L443 756 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 CPA1P15085 419 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 GTF2E1P29083 439 aaPredicted RBP22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 TPD52L1Q16890 204 aaPredicted RBP22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 PDRG1Q9NUG6 133 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 NCKAP5LQ9HCH0 1330 aa22.07■■□□□ 1.12
SFSWAP-207ENST00000538548 NAA30Q147X3 362 aaPredicted RBP22.06■■□□□ 1.12
SFSWAP-207ENST00000538548 RBM43Q6ZSC3 357 aaKnown RBP22.06■■□□□ 1.12
SFSWAP-207ENST00000538548 KRT222Q8N1A0 295 aa22.06■■□□□ 1.12
SFSWAP-207ENST00000538548 TM6SF1Q9BZW5 370 aa22.06■■□□□ 1.12
SFSWAP-207ENST00000538548 TERF2Q15554 542 aa22.05■■□□□ 1.12
SFSWAP-207ENST00000538548 DDX19AQ9NUU7 478 aaKnown RBP22.05■■□□□ 1.12
SFSWAP-207ENST00000538548 CEP135Q66GS9 1140 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 CWC27Q6UX04 472 aaKnown RBP22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 CKAP2LQ8IYA6 745 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 ZNF397Q8NF99 534 aaPredicted RBP22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 NUDT16Q96DE0 195 aaKnown RBP22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 ZSWIM6Q9HCJ5 1215 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 TMEM51Q9NW97 253 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 DACT1Q9NYF0 836 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 CHMP3Q9Y3E7 222 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 CYP46A1Q9Y6A2 500 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 TTC21AQ8NDW8 1320 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 UBTFL1P0CB47 393 aaPredicted RBP22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 ST3GAL1Q11201 340 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 CACTINQ8WUQ7 758 aaKnown RBP22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 JAKMIP1Q96N16 626 aaKnown RBP22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 CCDC61Q9Y6R9 512 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 RGPD1P0DJD0 1748 aa22.04■■□□□ 1.12
SFSWAP-207ENST00000538548 CCDC66A2RUB6 948 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 CCDC30Q5VVM6 783 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 RHPN1Q8TCX5 695 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 USP44Q9H0E7 712 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 CLIP2Q9UDT6 1046 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 CDC25BP30305 580 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 LARP1BQ659C4 914 aaKnown RBP22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 SCAND2PQ9GZW5 306 aaPredicted RBP22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 AKAP12Q02952 1782 aa22.03■■□□□ 1.12
SFSWAP-207ENST00000538548 FAM208AQ9UK61 1670 aaKnown RBP22.02■■□□□ 1.12
SFSWAP-207ENST00000538548 NPHP3Q7Z494 1330 aa22.02■■□□□ 1.12
SFSWAP-207ENST00000538548 SURF6O75683 361 aaKnown RBP22.02■■□□□ 1.12
SFSWAP-207ENST00000538548 CRYBG1Q9Y4K1 1723 aa22.02■■□□□ 1.12
SFSWAP-207ENST00000538548 ITSN1Q15811 1721 aa22.02■■□□□ 1.12
SFSWAP-207ENST00000538548 ME3Q16798 604 aa22.02■■□□□ 1.12
SFSWAP-207ENST00000538548 CLSTN2Q9H4D0 955 aa22.02■■□□□ 1.12
SFSWAP-207ENST00000538548 GOLGA6L4A6NEF3 574 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 PDCP20941 246 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 KCNB2Q92953 911 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 KIF1BPQ96EK5 621 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 CAVIN2O95810 425 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 ZNF165P49910 485 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 POLA2Q14181 598 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 ADCK5Q3MIX3 580 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 RUFY2Q8WXA3 655 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 CACNA1FO60840 1977 aa22.01■■□□□ 1.11
SFSWAP-207ENST00000538548 KMT5BQ4FZB7 885 aa22■■□□□ 1.11
SFSWAP-207ENST00000538548 CDC37L1Q7L3B6 337 aa22■■□□□ 1.11
SFSWAP-207ENST00000538548 MAP3K5Q99683 1374 aa22■■□□□ 1.11
SFSWAP-207ENST00000538548 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
SFSWAP-207ENST00000538548 NEMFO60524 1076 aa22■■□□□ 1.11
SFSWAP-207ENST00000538548 FAM53CQ9NYF3 392 aa22■■□□□ 1.11
SFSWAP-207ENST00000538548 FOXO3O43524 673 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 DTNBO60941 627 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 PPP1R42Q7Z4L9 355 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 FERMT3Q86UX7 667 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 RBM6P78332 1123 aaKnown RBP21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 MTHFSDQ2M296 383 aaKnown RBP21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 CCDC144BQ3MJ40 725 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 PRPF40BQ6NWY9 871 aaKnown RBP21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 CCDC144CPQ8IYA2 1237 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 ZNF592Q92610 1267 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 TTC21BQ7Z4L5 1316 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 ADGRL3Q9HAR2 1447 aa21.99■■□□□ 1.11
SFSWAP-207ENST00000538548 TMEM2Q9UHN6 1383 aa21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 FAM193AP78312 1265 aa21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 NECAB1Q8N987 351 aa21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 SPATA32Q96LK8 384 aa21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 NYAP1Q6ZVC0 841 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms