RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
CHFR-216ENST00000538235 G2E3Q7L622 706 aa16.97■□□□□ 0.31
CHFR-216ENST00000538235 DZIP3Q86Y13 1208 aaKnown RBP16.97■□□□□ 0.31
CHFR-216ENST00000538235 SPON1Q9HCB6 807 aa16.97■□□□□ 0.31
CHFR-216ENST00000538235 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
CHFR-216ENST00000538235 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
CHFR-216ENST00000538235 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.31
CHFR-216ENST00000538235 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
CHFR-216ENST00000538235 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.31
CHFR-216ENST00000538235 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHFR-216ENST00000538235 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
CHFR-216ENST00000538235 E9PSI1 815 aa16.95■□□□□ 0.3
CHFR-216ENST00000538235 MMP10P09238 476 aa16.95■□□□□ 0.3
CHFR-216ENST00000538235 NFIXQ14938 502 aa16.95■□□□□ 0.3
CHFR-216ENST00000538235 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
CHFR-216ENST00000538235 TM4SF1P30408 202 aa16.94■□□□□ 0.3
CHFR-216ENST00000538235 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
CHFR-216ENST00000538235 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
CHFR-216ENST00000538235 MAP3K15Q6ZN16 1313 aa16.94■□□□□ 0.3
CHFR-216ENST00000538235 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
CHFR-216ENST00000538235 POLRMTO00411 1230 aaKnown RBP16.93■□□□□ 0.3
CHFR-216ENST00000538235 COPS6Q7L5N1 327 aa16.93■□□□□ 0.3
CHFR-216ENST00000538235 ATP10DQ9P241 1426 aa16.93■□□□□ 0.3
CHFR-216ENST00000538235 ADCY9O60503 1353 aa16.92■□□□□ 0.3
CHFR-216ENST00000538235 COL4A1P02462 1669 aa16.92■□□□□ 0.3
CHFR-216ENST00000538235 A0A087WZG4 1122 aa16.91■□□□□ 0.3
CHFR-216ENST00000538235 ZPR1O75312 459 aa16.91■□□□□ 0.3
CHFR-216ENST00000538235 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
CHFR-216ENST00000538235 AIMP1Q12904 312 aaKnown RBP16.91■□□□□ 0.3
CHFR-216ENST00000538235 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
CHFR-216ENST00000538235 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
CHFR-216ENST00000538235 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
CHFR-216ENST00000538235 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
CHFR-216ENST00000538235 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
CHFR-216ENST00000538235 ARXQ96QS3 562 aa16.9■□□□□ 0.3
CHFR-216ENST00000538235 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
CHFR-216ENST00000538235 TAF1P21675 1872 aa16.9■□□□□ 0.3
CHFR-216ENST00000538235 ABCC12Q96J65 1359 aa16.89■□□□□ 0.3
CHFR-216ENST00000538235 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
CHFR-216ENST00000538235 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
CHFR-216ENST00000538235 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
CHFR-216ENST00000538235 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
CHFR-216ENST00000538235 GPTP24298 496 aa16.87■□□□□ 0.29
CHFR-216ENST00000538235 GIGYF2Q6Y7W6 1299 aaKnown RBP16.87■□□□□ 0.29
CHFR-216ENST00000538235 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
CHFR-216ENST00000538235 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
CHFR-216ENST00000538235 POLD1P28340 1107 aa16.86■□□□□ 0.29
CHFR-216ENST00000538235 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
CHFR-216ENST00000538235 ZNF34Q8IZ26 560 aa16.86■□□□□ 0.29
CHFR-216ENST00000538235 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
CHFR-216ENST00000538235 HYPKQ9NX55 129 aa16.86■□□□□ 0.29
CHFR-216ENST00000538235 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
CHFR-216ENST00000538235 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
CHFR-216ENST00000538235 SERPINB2P05120 415 aa16.85■□□□□ 0.29
CHFR-216ENST00000538235 PRR5LQ6MZQ0 368 aa16.85■□□□□ 0.29
CHFR-216ENST00000538235 MYH3P11055 1940 aa16.85■□□□□ 0.29
CHFR-216ENST00000538235 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
CHFR-216ENST00000538235 FLIIQ13045 1269 aa16.84■□□□□ 0.29
CHFR-216ENST00000538235 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
CHFR-216ENST00000538235 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
CHFR-216ENST00000538235 YTHDC1Q96MU7 727 aaKnown RBP16.84■□□□□ 0.29
CHFR-216ENST00000538235 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
CHFR-216ENST00000538235 NIP7Q9Y221 180 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHFR-216ENST00000538235 FAM177BA6PVY3 158 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 RGL2O15211 777 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 NTSR2O95665 410 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 SUSD4Q5VX71 490 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 SLX4Q8IY92 1834 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 ISCA1Q9BUE6 129 aa16.83■□□□□ 0.28
CHFR-216ENST00000538235 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
CHFR-216ENST00000538235 IBTKQ9P2D0 1353 aaPredicted RBP16.82■□□□□ 0.28
CHFR-216ENST00000538235 F6X3S4 739 aa16.82■□□□□ 0.28
CHFR-216ENST00000538235 ATP5J2-PTCD1G3V325 749 aa16.82■□□□□ 0.28
CHFR-216ENST00000538235 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
CHFR-216ENST00000538235 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
CHFR-216ENST00000538235 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
CHFR-216ENST00000538235 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
CHFR-216ENST00000538235 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
CHFR-216ENST00000538235 PI4KAP2A4QPH2 592 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 TCIRG1Q13488 830 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 SLC51AQ86UW1 340 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 NUTM1Q86Y26 1132 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 PI4KAP1Q8N8J0 262 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 STK31Q9BXU1 1019 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 MAP3K2Q9Y2U5 619 aa16.81■□□□□ 0.28
CHFR-216ENST00000538235 KCNA3P22001 575 aa16.8■□□□□ 0.28
CHFR-216ENST00000538235 CHRNA5P30532 468 aa16.8■□□□□ 0.28
CHFR-216ENST00000538235 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
CHFR-216ENST00000538235 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
CHFR-216ENST00000538235 ZNF652Q9Y2D9 606 aa16.8■□□□□ 0.28
CHFR-216ENST00000538235 ERFEQ4G0M1 354 aa16.79■□□□□ 0.28
CHFR-216ENST00000538235 KSR2Q6VAB6 950 aa16.79■□□□□ 0.28
CHFR-216ENST00000538235 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
CHFR-216ENST00000538235 SETDB2Q96T68 719 aa16.79■□□□□ 0.28
CHFR-216ENST00000538235 MYD88Q99836 296 aa16.79■□□□□ 0.28
CHFR-216ENST00000538235 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms