RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 RGS22Q8NE09 1264 aa13.6□□□□□ -0.23
SEMA4D-221ENST00000537934 CHMP4AQ9BY43 222 aa13.6□□□□□ -0.23
SEMA4D-221ENST00000537934 TRIM34Q9BYJ4 488 aa13.6□□□□□ -0.23
SEMA4D-221ENST00000537934 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-221ENST00000537934 PAXBP1Q9Y5B6 917 aa13.59□□□□□ -0.23
SEMA4D-221ENST00000537934 RGPD5Q99666 1765 aa13.59□□□□□ -0.23
SEMA4D-221ENST00000537934 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
SEMA4D-221ENST00000537934 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
SEMA4D-221ENST00000537934 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
SEMA4D-221ENST00000537934 MX1P20591 662 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 CHRNA2Q15822 529 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 USP48Q86UV5 1035 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 IL16Q14005 1332 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 MCM2P49736 904 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 MCM10Q7L590 875 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 ANKRD24Q8TF21 1146 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
SEMA4D-221ENST00000537934 ERICH4A6NGS2 130 aa13.57□□□□□ -0.24
SEMA4D-221ENST00000537934 CUL4AQ13619 759 aa13.57□□□□□ -0.24
SEMA4D-221ENST00000537934 ZNF397Q8NF99 534 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-221ENST00000537934 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
SEMA4D-221ENST00000537934 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
SEMA4D-221ENST00000537934 DHX37Q8IY37 1157 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-221ENST00000537934 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
SEMA4D-221ENST00000537934 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-221ENST00000537934 TMEM87AQ8NBN3 555 aa13.56□□□□□ -0.24
SEMA4D-221ENST00000537934 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-221ENST00000537934 FEZ2Q9UHY8 353 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-221ENST00000537934 KIAA0232Q92628 1395 aa13.56□□□□□ -0.24
SEMA4D-221ENST00000537934 CCDC112Q8NEF3 446 aa13.56□□□□□ -0.24
SEMA4D-221ENST00000537934 AP5Z1O43299 807 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 REC8O95072 547 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 LMOD3Q0VAK6 560 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 EFCC1Q9HA90 598 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 ERBB3P21860 1342 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 NAA30Q147X3 362 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 ROBO1Q9Y6N7 1651 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 CYP2C19P33261 490 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 C1orf115Q9H7X2 142 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
SEMA4D-221ENST00000537934 TNNT1P13805 278 aa13.54□□□□□ -0.24
SEMA4D-221ENST00000537934 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
SEMA4D-221ENST00000537934 SPC24Q8NBT2 197 aa13.54□□□□□ -0.24
SEMA4D-221ENST00000537934 YY1AP1Q9H869 796 aa13.54□□□□□ -0.24
SEMA4D-221ENST00000537934 COL18A1P39060 1754 aa13.54□□□□□ -0.24
SEMA4D-221ENST00000537934 MBIPQ9NS73 344 aa13.54□□□□□ -0.24
SEMA4D-221ENST00000537934 C16orf45Q96MC5 204 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-221ENST00000537934 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
SEMA4D-221ENST00000537934 ZNF853P0CG23 659 aa13.53□□□□□ -0.24
SEMA4D-221ENST00000537934 NEK4P51957 841 aa13.53□□□□□ -0.24
SEMA4D-221ENST00000537934 HNRNPH2P55795 449 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-221ENST00000537934 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-221ENST00000537934 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.24
SEMA4D-221ENST00000537934 ZNF428Q96B54 188 aa13.52□□□□□ -0.24
SEMA4D-221ENST00000537934 KIF1BPQ96EK5 621 aa13.52□□□□□ -0.24
SEMA4D-221ENST00000537934 WDR33Q9C0J8 1336 aaKnown RBP13.52□□□□□ -0.25
SEMA4D-221ENST00000537934 PTGS1P23219 599 aa13.52□□□□□ -0.25
SEMA4D-221ENST00000537934 GNAI1P63096 354 aa13.52□□□□□ -0.25
SEMA4D-221ENST00000537934 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.25
SEMA4D-221ENST00000537934 CPDO75976 1380 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 SDSP20132 328 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 UBE2HP62256 183 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 NLRP2Q9NX02 1062 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 ABCA3Q99758 1704 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 ELL2O00472 640 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 ERC2O15083 957 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 PRDM11Q9NQV5 511 aa13.51□□□□□ -0.25
SEMA4D-221ENST00000537934 CSB-PGBD3P0DP91 1061 aa13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 RAD51AP2Q09MP3 1159 aa13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 DCTPP1Q9H773 170 aa13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 MIS18AQ9NYP9 233 aa13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 GEMIN8Q9NWZ8 242 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 CRB1P82279 1406 aa13.5□□□□□ -0.25
SEMA4D-221ENST00000537934 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
SEMA4D-221ENST00000537934 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
SEMA4D-221ENST00000537934 KRT24Q2M2I5 525 aa13.49□□□□□ -0.25
SEMA4D-221ENST00000537934 TRERF1Q96PN7 1200 aa13.49□□□□□ -0.25
SEMA4D-221ENST00000537934 MAP3K5Q99683 1374 aa13.49□□□□□ -0.25
SEMA4D-221ENST00000537934 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
SEMA4D-221ENST00000537934 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
SEMA4D-221ENST00000537934 C8orf58Q8NAV2 365 aa13.48□□□□□ -0.25
SEMA4D-221ENST00000537934 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
SEMA4D-221ENST00000537934 TNNT3P45378 269 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-221ENST00000537934 CEP135Q66GS9 1140 aa13.48□□□□□ -0.25
SEMA4D-221ENST00000537934 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 383.7 ms