RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
PEX11B-203ENST00000537888 TM4SF1P30408 202 aa16.37■□□□□ 0.21
PEX11B-203ENST00000537888 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
PEX11B-203ENST00000537888 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
PEX11B-203ENST00000537888 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
PEX11B-203ENST00000537888 YBX3P16989 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
PEX11B-203ENST00000537888 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
PEX11B-203ENST00000537888 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
PEX11B-203ENST00000537888 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
PEX11B-203ENST00000537888 ZPR1O75312 459 aa16.35■□□□□ 0.21
PEX11B-203ENST00000537888 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
PEX11B-203ENST00000537888 CLUAP1Q96AJ1 413 aa16.35■□□□□ 0.21
PEX11B-203ENST00000537888 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
PEX11B-203ENST00000537888 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
PEX11B-203ENST00000537888 SSH1Q8WYL5 1049 aa16.34■□□□□ 0.21
PEX11B-203ENST00000537888 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
PEX11B-203ENST00000537888 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
PEX11B-203ENST00000537888 NRXN2Q9P2S2 1712 aa16.34■□□□□ 0.21
PEX11B-203ENST00000537888 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
PEX11B-203ENST00000537888 GPR162Q16538 588 aa16.34■□□□□ 0.21
PEX11B-203ENST00000537888 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
PEX11B-203ENST00000537888 A0A087WZG4 1122 aa16.33■□□□□ 0.2
PEX11B-203ENST00000537888 NBPF26B4DH59 902 aa16.33■□□□□ 0.2
PEX11B-203ENST00000537888 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
PEX11B-203ENST00000537888 RLBP1P12271 317 aa16.33■□□□□ 0.2
PEX11B-203ENST00000537888 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
PEX11B-203ENST00000537888 NFIXQ14938 502 aa16.33■□□□□ 0.2
PEX11B-203ENST00000537888 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.2
PEX11B-203ENST00000537888 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
PEX11B-203ENST00000537888 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
PEX11B-203ENST00000537888 BCORQ6W2J9 1755 aa16.32■□□□□ 0.2
PEX11B-203ENST00000537888 MVPQ14764 893 aaKnown RBP16.32■□□□□ 0.2
PEX11B-203ENST00000537888 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
PEX11B-203ENST00000537888 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
PEX11B-203ENST00000537888 IPO8O15397 1037 aaKnown RBP16.31■□□□□ 0.2
PEX11B-203ENST00000537888 CAMTA2O94983 1202 aa16.31■□□□□ 0.2
PEX11B-203ENST00000537888 ATF7IPQ6VMQ6 1270 aa16.31■□□□□ 0.2
PEX11B-203ENST00000537888 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
PEX11B-203ENST00000537888 VAMP4O75379 141 aa16.3■□□□□ 0.2
PEX11B-203ENST00000537888 YY1P25490 414 aa16.3■□□□□ 0.2
PEX11B-203ENST00000537888 TGFB2P61812 414 aa16.3■□□□□ 0.2
PEX11B-203ENST00000537888 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
PEX11B-203ENST00000537888 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
PEX11B-203ENST00000537888 AFDNP55196 1824 aaKnown RBP16.3■□□□□ 0.2
PEX11B-203ENST00000537888 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
PEX11B-203ENST00000537888 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
PEX11B-203ENST00000537888 CHD4Q14839 1912 aa16.29■□□□□ 0.2
PEX11B-203ENST00000537888 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
PEX11B-203ENST00000537888 TRIM27P14373 513 aa16.29■□□□□ 0.2
PEX11B-203ENST00000537888 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
PEX11B-203ENST00000537888 ARHGAP45Q92619 1136 aa16.29■□□□□ 0.2
PEX11B-203ENST00000537888 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
PEX11B-203ENST00000537888 CHL1O00533 1208 aa16.28■□□□□ 0.2
PEX11B-203ENST00000537888 KCNA3P22001 575 aa16.28■□□□□ 0.2
PEX11B-203ENST00000537888 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
PEX11B-203ENST00000537888 FTSJ3Q8IY81 847 aaKnown RBP16.28■□□□□ 0.2
PEX11B-203ENST00000537888 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
PEX11B-203ENST00000537888 LAS1LQ9Y4W2 734 aaKnown RBP16.28■□□□□ 0.2
PEX11B-203ENST00000537888 CARMIL3Q8ND23 1372 aa16.28■□□□□ 0.2
PEX11B-203ENST00000537888 A0A0G2JLW4 131 aa16.27■□□□□ 0.2
PEX11B-203ENST00000537888 GRIN3BO60391 1043 aa16.27■□□□□ 0.2
PEX11B-203ENST00000537888 DPEP1P16444 411 aa16.27■□□□□ 0.2
PEX11B-203ENST00000537888 IGHDP01880 384 aa16.27■□□□□ 0.19
PEX11B-203ENST00000537888 SERPINB2P05120 415 aa16.27■□□□□ 0.19
PEX11B-203ENST00000537888 MRPL50Q8N5N7 158 aaKnown RBP16.27■□□□□ 0.19
PEX11B-203ENST00000537888 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.19
PEX11B-203ENST00000537888 RGL2O15211 777 aa16.26■□□□□ 0.19
PEX11B-203ENST00000537888 BACH2Q9BYV9 841 aa16.26■□□□□ 0.19
PEX11B-203ENST00000537888 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
PEX11B-203ENST00000537888 PDE4AP27815 886 aa16.25■□□□□ 0.19
PEX11B-203ENST00000537888 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
PEX11B-203ENST00000537888 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
PEX11B-203ENST00000537888 TWISTNBQ3B726 338 aaPredicted RBP16.24■□□□□ 0.19
PEX11B-203ENST00000537888 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
PEX11B-203ENST00000537888 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
PEX11B-203ENST00000537888 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
PEX11B-203ENST00000537888 TSPYL6Q8N831 410 aa16.24■□□□□ 0.19
PEX11B-203ENST00000537888 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
PEX11B-203ENST00000537888 PDIA6Q15084 440 aa16.23■□□□□ 0.19
PEX11B-203ENST00000537888 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
PEX11B-203ENST00000537888 CHRNA5P30532 468 aa16.23■□□□□ 0.19
PEX11B-203ENST00000537888 PRR5LQ6MZQ0 368 aa16.23■□□□□ 0.19
PEX11B-203ENST00000537888 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
PEX11B-203ENST00000537888 RWDD1Q9H446 243 aaPredicted RBP16.23■□□□□ 0.19
PEX11B-203ENST00000537888 ANKRD31Q8N7Z5 1873 aa16.22■□□□□ 0.19
PEX11B-203ENST00000537888 DLEC1Q9Y238 1755 aa16.22■□□□□ 0.19
PEX11B-203ENST00000537888 HLFQ16534 295 aa16.21■□□□□ 0.19
PEX11B-203ENST00000537888 TTLL7Q6ZT98 887 aa16.21■□□□□ 0.19
PEX11B-203ENST00000537888 TMEM57Q8N5G2 664 aa16.21■□□□□ 0.19
PEX11B-203ENST00000537888 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
PEX11B-203ENST00000537888 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
PEX11B-203ENST00000537888 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
PEX11B-203ENST00000537888 ZNF652Q9Y2D9 606 aa16.21■□□□□ 0.19
PEX11B-203ENST00000537888 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
PEX11B-203ENST00000537888 MAP3K15Q6ZN16 1313 aa16.2■□□□□ 0.18
PEX11B-203ENST00000537888 HDAC1Q13547 482 aaPredicted RBP16.2■□□□□ 0.18
PEX11B-203ENST00000537888 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
PEX11B-203ENST00000537888 ZNF784Q8NCA9 323 aaPredicted RBP16.2■□□□□ 0.18
PEX11B-203ENST00000537888 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
PEX11B-203ENST00000537888 PIM2Q9P1W9 311 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms