RNA–Protein interactions for RNA: ENST00000537062.1

NPIPA1-205, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 2

Gene NPIPA1, Length 568 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-205	ENST00000537062	OS9	Q13438	667 aa	Predicted RBP	11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	NUTM1	Q86Y26	1132 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	RNF214	Q8ND24	703 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	PIBF1	Q8WXW3	757 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	EVI5L	Q96CN4	794 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	UPF3B	Q9BZI7	483 aa	Known RBP	11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	ECHDC1	Q9NTX5	307 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	PDRG1	Q9NUG6	133 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	USP25	Q9UHP3	1055 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	PIK3C2A	O00443	1686 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	CRYBG1	Q9Y4K1	1723 aa		11.23	□□□□□ -0.61
NPIPA1-205	ENST00000537062	RGPD8	O14715	1765 aa	Predicted RBP	11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	SLIT1	O75093	1534 aa		11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	GADD45B	O75293	160 aa	Predicted RBP	11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	SYT1	P21579	422 aa		11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	AK2	P54819	239 aa		11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	RNF20	Q5VTR2	975 aa		11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	MYRIP	Q8NFW9	859 aa		11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	ZSWIM6	Q9HCJ5	1215 aa		11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	IL1RAPL2	Q9NP60	686 aa		11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
NPIPA1-205	ENST00000537062	KDM3B	Q7LBC6	1761 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	CCDC171	Q6TFL3	1326 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	SOX12	O15370	315 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	ADCY5	O95622	1261 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	CCDC192	P0DO97	292 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	EIF4A1	P60842	406 aa	Known RBP	11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	AMOT	Q4VCS5	1084 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	BEND3	Q5T5X7	828 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	TSHZ3	Q63HK5	1081 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	NOL8	Q76FK4	1167 aa	Known RBP	11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	UNC5CL	Q8IV45	518 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	HYPK	Q9NX55	129 aa		11.21	□□□□□ -0.61
NPIPA1-205	ENST00000537062	ARHGAP23	Q9P227	1491 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	OVOS2	A0A0G2JMS6	1433 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CEMIP	Q8WUJ3	1361 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CAVIN2	O95810	425 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	IFIT2	P09913	472 aa	Known RBP	11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CHAF1A	Q13111	956 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	RUFY3	Q7L099	469 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	SPTLC3	Q9NUV7	552 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	FAM13B	Q9NYF5	915 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	DBF4	Q9UBU7	674 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CNPY2	Q9Y2B0	182 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	NWD1	Q149M9	1564 aa		11.2	□□□□□ -0.62
NPIPA1-205	ENST00000537062	NCAPD2	Q15021	1401 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	ELP1	O95163	1332 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	NUTM2F	A1L443	756 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	DDX58	O95786	925 aa	Known RBP	11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CAST	P20810	708 aa	Known RBP	11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	LTK	P29376	864 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	AKAP4	Q5JQC9	854 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CWC27	Q6UX04	472 aa	Known RBP	11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	KCNH5	Q8NCM2	988 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	IP6K1	Q92551	441 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CHMP4C	Q96CF2	233 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	SNRK	Q9NRH2	765 aa		11.19	□□□□□ -0.62
NPIPA1-205	ENST00000537062	LMO7	Q8WWI1	1683 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	GJB2	P29033	226 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	KRT85	P78386	507 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	TEF	Q10587	303 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	MKRN4P	Q13434	485 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	KRT32	Q14532	448 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	TICAM2	Q86XR7	235 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	ABTB2	Q8N961	1025 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	NECTIN2	Q92692	538 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	JAKMIP1	Q96N16	626 aa	Known RBP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	ZMYND15	Q9H091	742 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	PHAX	Q9H814	394 aa	Known RBP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	HMG20B	Q9P0W2	317 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	MTMR6	Q9Y217	621 aa		11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	MED1	Q15648	1581 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	MARF1	Q9Y4F3	1742 aa	Known RBP	11.18	□□□□□ -0.62
NPIPA1-205	ENST00000537062	PI4KAP2	A4QPH2	592 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	KCNJ4	P48050	445 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	RBM10	P98175	930 aa	Known RBP	11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	NECTIN1	Q15223	517 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	LARP1B	Q659C4	914 aa	Known RBP	11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	KSR2	Q6VAB6	950 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	RASEF	Q8IZ41	740 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	PI4KAP1	Q8N8J0	262 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	SLC26A8	Q96RN1	970 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	FUCA2	Q9BTY2	467 aa		11.17	□□□□□ -0.62
NPIPA1-205	ENST00000537062	LTN1	O94822	1766 aa		11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	GOLGA6L4	A6NEF3	574 aa		11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	BTBD11	A6QL63	1104 aa		11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	HCLS1	P14317	486 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	EIF2S2	P20042	333 aa	Known RBP	11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	MAP3K11	Q16584	847 aa		11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	MAP4K1	Q92918	833 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms