RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 WWC1Q8IX03 1113 aa17.15■□□□□ 0.34
PRKDC-206ENST00000536429 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
PRKDC-206ENST00000536429 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
PRKDC-206ENST00000536429 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
PRKDC-206ENST00000536429 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
PRKDC-206ENST00000536429 GNAI1P63096 354 aa17.14■□□□□ 0.33
PRKDC-206ENST00000536429 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
PRKDC-206ENST00000536429 DUSP27Q5VZP5 1158 aa17.14■□□□□ 0.33
PRKDC-206ENST00000536429 ZBTB3Q9H5J0 574 aa17.14■□□□□ 0.33
PRKDC-206ENST00000536429 MAP3K15Q6ZN16 1313 aa17.14■□□□□ 0.33
PRKDC-206ENST00000536429 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.33
PRKDC-206ENST00000536429 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
PRKDC-206ENST00000536429 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
PRKDC-206ENST00000536429 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRKDC-206ENST00000536429 ZNF652Q9Y2D9 606 aa17.13■□□□□ 0.33
PRKDC-206ENST00000536429 FAM177BA6PVY3 158 aa17.12■□□□□ 0.33
PRKDC-206ENST00000536429 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
PRKDC-206ENST00000536429 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
PRKDC-206ENST00000536429 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
PRKDC-206ENST00000536429 KIF6Q6ZMV9 814 aa17.12■□□□□ 0.33
PRKDC-206ENST00000536429 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
PRKDC-206ENST00000536429 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
PRKDC-206ENST00000536429 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
PRKDC-206ENST00000536429 RGL2O15211 777 aa17.11■□□□□ 0.33
PRKDC-206ENST00000536429 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
PRKDC-206ENST00000536429 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
PRKDC-206ENST00000536429 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
PRKDC-206ENST00000536429 PIM2Q9P1W9 311 aa17.11■□□□□ 0.33
PRKDC-206ENST00000536429 HOXB7P09629 217 aa17.1■□□□□ 0.33
PRKDC-206ENST00000536429 GPTP24298 496 aa17.1■□□□□ 0.33
PRKDC-206ENST00000536429 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
PRKDC-206ENST00000536429 DALRD3Q5D0E6 543 aaKnown RBP17.1■□□□□ 0.33
PRKDC-206ENST00000536429 COPS6Q7L5N1 327 aa17.1■□□□□ 0.33
PRKDC-206ENST00000536429 TSPYL6Q8N831 410 aa17.1■□□□□ 0.33
PRKDC-206ENST00000536429 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
PRKDC-206ENST00000536429 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRKDC-206ENST00000536429 UBN2Q6ZU65 1347 aa17.1■□□□□ 0.33
PRKDC-206ENST00000536429 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
PRKDC-206ENST00000536429 NPHP1O15259 732 aa17.08■□□□□ 0.32
PRKDC-206ENST00000536429 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
PRKDC-206ENST00000536429 GIGYF2Q6Y7W6 1299 aaKnown RBP17.08■□□□□ 0.32
PRKDC-206ENST00000536429 H0YIN7 160 aa17.07■□□□□ 0.32
PRKDC-206ENST00000536429 ST5P78524 1137 aa17.07■□□□□ 0.32
PRKDC-206ENST00000536429 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
PRKDC-206ENST00000536429 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
PRKDC-206ENST00000536429 ZNF34Q8IZ26 560 aa17.07■□□□□ 0.32
PRKDC-206ENST00000536429 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
PRKDC-206ENST00000536429 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
PRKDC-206ENST00000536429 ABCC12Q96J65 1359 aa17.06■□□□□ 0.32
PRKDC-206ENST00000536429 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
PRKDC-206ENST00000536429 ANKRD31Q8N7Z5 1873 aa17.06■□□□□ 0.32
PRKDC-206ENST00000536429 IL16Q14005 1332 aa17.06■□□□□ 0.32
PRKDC-206ENST00000536429 PDE6BP35913 854 aa17.06■□□□□ 0.32
PRKDC-206ENST00000536429 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
PRKDC-206ENST00000536429 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
PRKDC-206ENST00000536429 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
PRKDC-206ENST00000536429 ZNF622Q969S3 477 aaKnown RBP eCLIP17.05■□□□□ 0.32
PRKDC-206ENST00000536429 FANCIQ9NVI1 1328 aa17.04■□□□□ 0.32
PRKDC-206ENST00000536429 SRGNP10124 158 aa17.04■□□□□ 0.32
PRKDC-206ENST00000536429 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
PRKDC-206ENST00000536429 WDR63Q8IWG1 891 aa17.04■□□□□ 0.32
PRKDC-206ENST00000536429 TTLL6Q8N841 843 aa17.04■□□□□ 0.32
PRKDC-206ENST00000536429 ZNF428Q96B54 188 aa17.04■□□□□ 0.32
PRKDC-206ENST00000536429 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
PRKDC-206ENST00000536429 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
PRKDC-206ENST00000536429 NTSR2O95665 410 aa17.03■□□□□ 0.32
PRKDC-206ENST00000536429 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
PRKDC-206ENST00000536429 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
PRKDC-206ENST00000536429 CHD4Q14839 1912 aa17.03■□□□□ 0.32
PRKDC-206ENST00000536429 KLRG2A4D1S0 409 aaPredicted RBP17.02■□□□□ 0.32
PRKDC-206ENST00000536429 GTF2E1P29083 439 aaPredicted RBP17.02■□□□□ 0.32
PRKDC-206ENST00000536429 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
PRKDC-206ENST00000536429 NUP98P52948 1817 aa17.02■□□□□ 0.31
PRKDC-206ENST00000536429 ADCY9O60503 1353 aa17.02■□□□□ 0.31
PRKDC-206ENST00000536429 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 CCER2I3L3R5 266 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 RASSF7Q02833 373 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
PRKDC-206ENST00000536429 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
PRKDC-206ENST00000536429 IBTKQ9P2D0 1353 aaPredicted RBP17.01■□□□□ 0.31
PRKDC-206ENST00000536429 PARP10Q53GL7 1025 aa17■□□□□ 0.31
PRKDC-206ENST00000536429 STYK1Q6J9G0 422 aa17■□□□□ 0.31
PRKDC-206ENST00000536429 SYNE4Q8N205 404 aa17■□□□□ 0.31
PRKDC-206ENST00000536429 MASTLQ96GX5 879 aa17■□□□□ 0.31
PRKDC-206ENST00000536429 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
PRKDC-206ENST00000536429 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
PRKDC-206ENST00000536429 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
PRKDC-206ENST00000536429 C21orf2O43822 256 aa16.99■□□□□ 0.31
PRKDC-206ENST00000536429 PRELPP51888 382 aa16.99■□□□□ 0.31
PRKDC-206ENST00000536429 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
PRKDC-206ENST00000536429 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
PRKDC-206ENST00000536429 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
PRKDC-206ENST00000536429 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
PRKDC-206ENST00000536429 PRPF40BQ6NWY9 871 aaKnown RBP16.99■□□□□ 0.31
PRKDC-206ENST00000536429 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms