RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 GJB2P29033 226 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 MAP3K11Q16584 847 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 CCDC144BQ3MJ40 725 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 VPS53Q5VIR6 699 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 ZNF771Q7L3S4 317 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-215ENST00000536145 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 KRT222Q8N1A0 295 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 RILPL2Q969X0 211 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 KIF1BPQ96EK5 621 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 NUP62CLQ9H1M0 184 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 CLSTN2Q9H4D0 955 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 ZSWIM6Q9HCJ5 1215 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 SH2B1Q9NRF2 756 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-215ENST00000536145 NRBP1Q9UHY1 535 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 SOS1Q07889 1333 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-215ENST00000536145 MAP3K5Q99683 1374 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 TRIM6-TRIM34B2RNG4 842 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 GIGYF1O75420 1035 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-215ENST00000536145 IRX5P78411 483 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-215ENST00000536145 IQCB1Q15051 598 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 KMT5BQ4FZB7 885 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 MCM10Q7L590 875 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 LUZP1Q86V48 1076 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 CCDC112Q8NEF3 446 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 SIRT1Q96EB6 747 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 ERO1AQ96HE7 468 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 ALDH8A1Q9H2A2 487 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-215ENST00000536145 SNRKQ9NRH2 765 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 DDX19AQ9NUU7 478 aaKnown RBP8.24□□□□□ -1.09
CPSF7-215ENST00000536145 NRXN3Q9Y4C0 1643 aa8.24□□□□□ -1.09
CPSF7-215ENST00000536145 USP31Q70CQ4 1352 aa8.23□□□□□ -1.09
CPSF7-215ENST00000536145 WASLO00401 505 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-215ENST00000536145 NEMFO60524 1076 aa8.23□□□□□ -1.09
CPSF7-215ENST00000536145 H2AFXP16104 143 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-215ENST00000536145 RRS1Q15050 365 aaKnown RBP8.23□□□□□ -1.09
CPSF7-215ENST00000536145 CCDC83Q8IWF9 413 aa8.23□□□□□ -1.09
CPSF7-215ENST00000536145 NEO1Q92859 1461 aa8.23□□□□□ -1.09
CPSF7-215ENST00000536145 ADCY9O60503 1353 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 TECPR2O15040 1411 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 CCDC66A2RUB6 948 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 CPA1P15085 419 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 KRT85P78386 507 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 CCZ1BP86790 482 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 CCZ1P86791 482 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-215ENST00000536145 PTH1RQ03431 593 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 NECTIN1Q15223 517 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 ME3Q16798 604 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 ANO6Q4KMQ2 910 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 CEP135Q66GS9 1140 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 SULT6B1Q6IMI4 303 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 RHPN1Q8TCX5 695 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 IPO4Q8TEX9 1081 aaKnown RBP8.22□□□□□ -1.09
CPSF7-215ENST00000536145 MRFAP1L1Q96HT8 127 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 COG3Q96JB2 828 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 PGBD1Q96JS3 809 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 C16orf45Q96MC5 204 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-215ENST00000536145 USP44Q9H0E7 712 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 L2HGDHQ9H9P8 463 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 PDRG1Q9NUG6 133 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 ZNF446Q9NWS9 450 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 ZNF215Q9UL58 517 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-215ENST00000536145 KDRP35968 1356 aa8.22□□□□□ -1.09
CPSF7-215ENST00000536145 TOPAZ1Q8N9V7 1692 aa8.21□□□□□ -1.09
CPSF7-215ENST00000536145 A2ML1A8K2U0 1454 aa8.21□□□□□ -1.09
CPSF7-215ENST00000536145 USP27XA6NNY8 438 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 CAVIN2O95810 425 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 CAPN2P17655 700 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 CYP2C19P33261 490 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 PLCB2Q00722 1185 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 FLIIQ13045 1269 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 RESTQ13127 1097 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 ADCK5Q3MIX3 580 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 CCDC93Q567U6 631 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 FBXO38Q6PIJ6 1188 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 SLC4A10Q6U841 1118 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 WAPLQ7Z5K2 1190 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 NUTM1Q86Y26 1132 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 LRRC8AQ8IWT6 810 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 LEO1Q8WVC0 666 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-215ENST00000536145 LARP6Q9BRS8 491 aaKnown RBP8.21□□□□□ -1.1
CPSF7-215ENST00000536145 UBXN6Q9BZV1 441 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 LRRFIP2Q9Y608 721 aaKnown RBP8.21□□□□□ -1.1
CPSF7-215ENST00000536145 NPHP3Q7Z494 1330 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 JCADQ9P266 1359 aa8.21□□□□□ -1.1
CPSF7-215ENST00000536145 RICTORQ6R327 1708 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 DIP2BQ9P265 1576 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 ZBTB22O15209 634 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 HTATSF1O43719 755 aaKnown RBP8.2□□□□□ -1.1
CPSF7-215ENST00000536145 TPD52L1Q16890 204 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-215ENST00000536145 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 CNTROBQ8N137 903 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 NUDT16Q96DE0 195 aaKnown RBP8.2□□□□□ -1.1
CPSF7-215ENST00000536145 TIGD1Q96MW7 591 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 TNMDQ9H2S6 317 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 IL1RAPL2Q9NP60 686 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 DACT1Q9NYF0 836 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms