RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
CD4-204ENST00000535707 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
CD4-204ENST00000535707 ITPK1Q13572 414 aa11.35□□□□□ -0.59
CD4-204ENST00000535707 ZMYND15Q9H091 742 aa11.35□□□□□ -0.59
CD4-204ENST00000535707 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
CD4-204ENST00000535707 DBF4Q9UBU7 674 aaPredicted RBP11.35□□□□□ -0.59
CD4-204ENST00000535707 CACNA1FO60840 1977 aa11.35□□□□□ -0.59
CD4-204ENST00000535707 KAT6BQ8WYB5 2073 aa11.35□□□□□ -0.59
CD4-204ENST00000535707 QSER1Q2KHR3 1735 aa11.35□□□□□ -0.59
CD4-204ENST00000535707 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
CD4-204ENST00000535707 PSEN1P49768 467 aa11.34□□□□□ -0.59
CD4-204ENST00000535707 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
CD4-204ENST00000535707 DNAJC10Q8IXB1 793 aa11.34□□□□□ -0.59
CD4-204ENST00000535707 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
CD4-204ENST00000535707 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
CD4-204ENST00000535707 IL6STP40189 918 aaPredicted RBP11.33□□□□□ -0.6
CD4-204ENST00000535707 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
CD4-204ENST00000535707 TSPYL6Q8N831 410 aa11.33□□□□□ -0.6
CD4-204ENST00000535707 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
CD4-204ENST00000535707 CCDC87Q9NVE4 849 aa11.33□□□□□ -0.6
CD4-204ENST00000535707 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
CD4-204ENST00000535707 RPS6KA4O75676 772 aa11.32□□□□□ -0.6
CD4-204ENST00000535707 CRKLP46109 303 aaKnown RBP11.32□□□□□ -0.6
CD4-204ENST00000535707 EZH2Q15910 746 aaKnown RBP11.32□□□□□ -0.6
CD4-204ENST00000535707 KRT24Q2M2I5 525 aa11.32□□□□□ -0.6
CD4-204ENST00000535707 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
CD4-204ENST00000535707 LINC00116Q8NCU8 138 aa11.32□□□□□ -0.6
CD4-204ENST00000535707 FLAD1Q8NFF5 587 aa11.32□□□□□ -0.6
CD4-204ENST00000535707 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
CD4-204ENST00000535707 A0A087WZG4 1122 aa11.31□□□□□ -0.6
CD4-204ENST00000535707 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
CD4-204ENST00000535707 SSFA2P28290 1259 aa11.31□□□□□ -0.6
CD4-204ENST00000535707 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
CD4-204ENST00000535707 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
CD4-204ENST00000535707 AK7Q96M32 723 aa11.31□□□□□ -0.6
CD4-204ENST00000535707 UBR3Q6ZT12 1888 aa11.3□□□□□ -0.6
CD4-204ENST00000535707 ELL2O00472 640 aaPredicted RBP11.3□□□□□ -0.6
CD4-204ENST00000535707 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
CD4-204ENST00000535707 PDIA6Q15084 440 aa11.3□□□□□ -0.6
CD4-204ENST00000535707 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
CD4-204ENST00000535707 DEFB132Q7Z7B7 95 aa11.3□□□□□ -0.6
CD4-204ENST00000535707 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
CD4-204ENST00000535707 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
CD4-204ENST00000535707 ARHGAP45Q92619 1136 aa11.3□□□□□ -0.6
CD4-204ENST00000535707 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
CD4-204ENST00000535707 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
CD4-204ENST00000535707 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
CD4-204ENST00000535707 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
CD4-204ENST00000535707 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
CD4-204ENST00000535707 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
CD4-204ENST00000535707 STK32BQ9NY57 414 aa11.29□□□□□ -0.6
CD4-204ENST00000535707 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
CD4-204ENST00000535707 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
CD4-204ENST00000535707 RTCBQ9Y3I0 505 aaKnown RBP11.29□□□□□ -0.6
CD4-204ENST00000535707 PTPRCP08575 1304 aa11.29□□□□□ -0.6
CD4-204ENST00000535707 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
CD4-204ENST00000535707 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
CD4-204ENST00000535707 MYH14Q7Z406 1995 aaKnown RBP11.28□□□□□ -0.6
CD4-204ENST00000535707 SOCS7O14512 581 aa11.28□□□□□ -0.6
CD4-204ENST00000535707 A1BGP04217 495 aa11.28□□□□□ -0.6
CD4-204ENST00000535707 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
CD4-204ENST00000535707 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
CD4-204ENST00000535707 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
CD4-204ENST00000535707 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
CD4-204ENST00000535707 COL15A1P39059 1388 aa11.28□□□□□ -0.6
CD4-204ENST00000535707 ERVV-1B6SEH8 477 aa11.27□□□□□ -0.61
CD4-204ENST00000535707 GNPATO15228 680 aa11.27□□□□□ -0.61
CD4-204ENST00000535707 IPO8O15397 1037 aaKnown RBP11.27□□□□□ -0.61
CD4-204ENST00000535707 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.61
CD4-204ENST00000535707 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
CD4-204ENST00000535707 KRI1Q8N9T8 703 aaKnown RBP11.27□□□□□ -0.61
CD4-204ENST00000535707 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
CD4-204ENST00000535707 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
CD4-204ENST00000535707 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
CD4-204ENST00000535707 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
CD4-204ENST00000535707 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
CD4-204ENST00000535707 CENPBP07199 599 aaPredicted RBP11.26□□□□□ -0.61
CD4-204ENST00000535707 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
CD4-204ENST00000535707 KCNQ4P56696 695 aa11.26□□□□□ -0.61
CD4-204ENST00000535707 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
CD4-204ENST00000535707 CLEC4GQ6UXB4 293 aa11.26□□□□□ -0.61
CD4-204ENST00000535707 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
CD4-204ENST00000535707 ZNF579Q8NAF0 562 aaKnown RBP11.26□□□□□ -0.61
CD4-204ENST00000535707 TFCP2L1Q9NZI6 479 aa11.26□□□□□ -0.61
CD4-204ENST00000535707 TUBGCP6Q96RT7 1819 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 MS4A1P11836 297 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 PDE4AP27815 886 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 FLIIQ13045 1269 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 ZNF827Q17R98 1081 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 KIF6Q6ZMV9 814 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.25□□□□□ -0.61
CD4-204ENST00000535707 PLBD2Q8NHP8 589 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 NARFQ9UHQ1 456 aa11.25□□□□□ -0.61
CD4-204ENST00000535707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
CD4-204ENST00000535707 MYL6BP14649 208 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 PROSER3Q2NL68 480 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 HSP90AB3PQ58FF7 597 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms