RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NDUFB5O43674 189 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 ICMTO60725 284 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 PLA2G4AP47712 749 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 EHHADHQ08426 723 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 NOM1Q5C9Z4 860 aaKnown RBP5.55□□□□□ -1.52
SNHG1-202ENST00000535689 ARSJQ5FYB0 599 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-202ENST00000535689 PRICKLE2Q7Z3G6 844 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 ALDH16A1Q8IZ83 802 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 KDF1Q8NAX2 398 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-202ENST00000535689 RNF217Q8TC41 542 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 GTF3C2Q8WUA4 911 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-202ENST00000535689 ZFP42Q96MM3 310 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 PHF24Q9UPV7 400 aa5.55□□□□□ -1.52
SNHG1-202ENST00000535689 FNDC3AQ9Y2H6 1198 aaKnown RBP5.55□□□□□ -1.52
SNHG1-202ENST00000535689 HMGXB3Q12766 1538 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 SOWAHDA6NJG2 315 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 EML1O00423 815 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 F11P03951 625 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 CTSOP43234 321 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-202ENST00000535689 C4orf17Q53FE4 359 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 IER5Q5VY09 327 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 NLRP8Q86W28 1048 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 TRIM47Q96LD4 638 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 MKNK1Q9BUB5 465 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 PHACTR1Q9C0D0 580 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 EFCC1Q9HA90 598 aa5.54□□□□□ -1.52
SNHG1-202ENST00000535689 ATAD2BQ9ULI0 1458 aa5.53□□□□□ -1.52
SNHG1-202ENST00000535689 POU4F2Q12837 409 aa5.53□□□□□ -1.52
SNHG1-202ENST00000535689 PIK3R5Q8WYR1 880 aa5.53□□□□□ -1.52
SNHG1-202ENST00000535689 NGLY1Q96IV0 654 aa5.53□□□□□ -1.52
SNHG1-202ENST00000535689 BRPF3Q9ULD4 1205 aa5.53□□□□□ -1.52
SNHG1-202ENST00000535689 HCN4Q9Y3Q4 1203 aa5.53□□□□□ -1.52
SNHG1-202ENST00000535689 THOC2Q8NI27 1593 aaKnown RBP5.53□□□□□ -1.52
SNHG1-202ENST00000535689 NESP48681 1621 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 H3BRB1 525 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 TGFBR3LH3BV60 316 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 NPR3P17342 541 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 VEGFBP49765 207 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 NEUROD1Q13562 356 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 NAA30Q147X3 362 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-202ENST00000535689 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 FOXD4L5Q5VV16 416 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-202ENST00000535689 PHLDB3Q6NSJ2 640 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 TUT1Q9H6E5 874 aaKnown RBP5.52□□□□□ -1.53
SNHG1-202ENST00000535689 DCTN4Q9UJW0 460 aa5.52□□□□□ -1.53
SNHG1-202ENST00000535689 CARNS1A5YM72 827 aa5.51□□□□□ -1.53
SNHG1-202ENST00000535689 FIGNL2A6NMB9 653 aa5.51□□□□□ -1.53
SNHG1-202ENST00000535689 MARSP56192 900 aaKnown RBP5.51□□□□□ -1.53
SNHG1-202ENST00000535689 LAMC2Q13753 1193 aa5.51□□□□□ -1.53
SNHG1-202ENST00000535689 IFT43Q96FT9 208 aa5.51□□□□□ -1.53
SNHG1-202ENST00000535689 TRERF1Q96PN7 1200 aa5.51□□□□□ -1.53
SNHG1-202ENST00000535689 CRISPLD1Q9H336 500 aa5.51□□□□□ -1.53
SNHG1-202ENST00000535689 MSX1P28360 303 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 PHKA2P46019 1235 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 SERPINB4P48594 390 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 ARSDP51689 593 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 MFAP1P55081 439 aaKnown RBP5.5□□□□□ -1.53
SNHG1-202ENST00000535689 DGKZQ13574 1117 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 COL19A1Q14993 1142 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 TBCELQ5QJ74 424 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 COX20Q5RI15 118 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 TMC1Q8TDI8 760 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 DMRTB1Q96MA1 342 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 GAS2L1Q99501 681 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-202ENST00000535689 AMOTL2Q9Y2J4 779 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 BAZ1BQ9UIG0 1483 aaKnown RBP5.5□□□□□ -1.53
SNHG1-202ENST00000535689 KIF21AQ7Z4S6 1674 aa5.5□□□□□ -1.53
SNHG1-202ENST00000535689 STAU1O95793 577 aaKnown RBP5.49□□□□□ -1.53
SNHG1-202ENST00000535689 MZF1P28698 734 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-202ENST00000535689 SAMD5Q5TGI4 173 aa5.49□□□□□ -1.53
SNHG1-202ENST00000535689 NPAS3Q8IXF0 933 aa5.49□□□□□ -1.53
SNHG1-202ENST00000535689 ZDHHC1Q8WTX9 485 aa5.49□□□□□ -1.53
SNHG1-202ENST00000535689 PMEPA1Q969W9 287 aa5.49□□□□□ -1.53
SNHG1-202ENST00000535689 SEPT3Q9UH03 358 aa5.49□□□□□ -1.53
SNHG1-202ENST00000535689 NSFL1CQ9UNZ2 370 aaKnown RBP5.49□□□□□ -1.53
SNHG1-202ENST00000535689 BAZ1AQ9NRL2 1556 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-202ENST00000535689 MAPK1P28482 360 aa5.48□□□□□ -1.53
SNHG1-202ENST00000535689 NFX1Q12986 1120 aaKnown RBP5.48□□□□□ -1.53
SNHG1-202ENST00000535689 ZNF326Q5BKZ1 582 aaKnown RBP5.48□□□□□ -1.53
SNHG1-202ENST00000535689 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-202ENST00000535689 RIPOR1Q6ZS17 1223 aa5.48□□□□□ -1.53
SNHG1-202ENST00000535689 SUSD3Q96L08 255 aa5.48□□□□□ -1.53
SNHG1-202ENST00000535689 QTRT2Q9H974 415 aaKnown RBP5.48□□□□□ -1.53
SNHG1-202ENST00000535689 SLAIN2Q9P270 581 aa5.48□□□□□ -1.53
SNHG1-202ENST00000535689 PARP3Q9Y6F1 533 aa5.48□□□□□ -1.53
SNHG1-202ENST00000535689 DNMT3AQ9Y6K1 912 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-202ENST00000535689 A0A1W2PNR3 127 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 LGR5O75473 907 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 MICAL2O94851 1124 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 RHOQP17081 205 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 ZAP70P43403 619 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 EIF1AXP47813 144 aaKnown RBP5.47□□□□□ -1.53
SNHG1-202ENST00000535689 ZNF211Q13398 564 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-202ENST00000535689 PCSK7Q16549 785 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 TREML4Q6UXN2 200 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 TREML1Q86YW5 311 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 SLC16A10Q8TF71 515 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 CEP63Q96MT8 703 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 ZIC5Q96T25 663 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 RBCK1Q9BYM8 510 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms