RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MYBBP1AQ9BQG0 1328 aaKnown RBP14.28□□□□□ -0.12
CCDC60-202ENST00000535685 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
CCDC60-202ENST00000535685 C1QTNF8P60827 252 aa14.27□□□□□ -0.13
CCDC60-202ENST00000535685 DALRD3Q5D0E6 543 aaKnown RBP14.27□□□□□ -0.13
CCDC60-202ENST00000535685 CLEC4GQ6UXB4 293 aa14.27□□□□□ -0.13
CCDC60-202ENST00000535685 WWC3Q9ULE0 1092 aa14.27□□□□□ -0.13
CCDC60-202ENST00000535685 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
CCDC60-202ENST00000535685 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
CCDC60-202ENST00000535685 TBC1D9BQ66K14 1250 aa14.26□□□□□ -0.13
CCDC60-202ENST00000535685 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
CCDC60-202ENST00000535685 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
CCDC60-202ENST00000535685 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
CCDC60-202ENST00000535685 TBC1D2BQ9UPU7 963 aa14.26□□□□□ -0.13
CCDC60-202ENST00000535685 CARMIL3Q8ND23 1372 aa14.25□□□□□ -0.13
CCDC60-202ENST00000535685 PRAMEF22A3QJZ6 481 aa14.25□□□□□ -0.13
CCDC60-202ENST00000535685 CHRNA5P30532 468 aa14.25□□□□□ -0.13
CCDC60-202ENST00000535685 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
CCDC60-202ENST00000535685 NBPF26B4DH59 902 aa14.24□□□□□ -0.13
CCDC60-202ENST00000535685 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
CCDC60-202ENST00000535685 EIF4A1P60842 406 aaKnown RBP14.24□□□□□ -0.13
CCDC60-202ENST00000535685 NBPF10Q6P3W6 841 aaKnown RBP14.24□□□□□ -0.13
CCDC60-202ENST00000535685 ARHGAP27Q6ZUM4 889 aa14.24□□□□□ -0.13
CCDC60-202ENST00000535685 NBPF15Q8N660 670 aa14.24□□□□□ -0.13
CCDC60-202ENST00000535685 BRIP1Q9BX63 1249 aa14.24□□□□□ -0.13
CCDC60-202ENST00000535685 NUP98P52948 1817 aa14.24□□□□□ -0.13
CCDC60-202ENST00000535685 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
CCDC60-202ENST00000535685 GSE1Q14687 1217 aa14.23□□□□□ -0.13
CCDC60-202ENST00000535685 SETDB2Q96T68 719 aa14.23□□□□□ -0.13
CCDC60-202ENST00000535685 GPBP1L1Q9HC44 474 aaPredicted RBP14.23□□□□□ -0.13
CCDC60-202ENST00000535685 H0YIN7 160 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 PDE6BP35913 854 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
CCDC60-202ENST00000535685 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 PRR5LQ6MZQ0 368 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 TTLL6Q8N841 843 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
CCDC60-202ENST00000535685 MIS18AQ9NYP9 233 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 ZNF652Q9Y2D9 606 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 ZNF330Q9Y3S2 320 aaPredicted RBP14.22□□□□□ -0.13
CCDC60-202ENST00000535685 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
CCDC60-202ENST00000535685 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
CCDC60-202ENST00000535685 NUBP1P53384 320 aa14.21□□□□□ -0.13
CCDC60-202ENST00000535685 RIPK4P57078 832 aa14.21□□□□□ -0.13
CCDC60-202ENST00000535685 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
CCDC60-202ENST00000535685 COL11A2P13942 1736 aaPredicted RBP14.21□□□□□ -0.14
CCDC60-202ENST00000535685 FER1L6Q2WGJ9 1857 aa14.21□□□□□ -0.14
CCDC60-202ENST00000535685 PAXIP1Q6ZW49 1069 aaPredicted RBP14.2□□□□□ -0.14
CCDC60-202ENST00000535685 C2CD5Q86YS7 1000 aa14.2□□□□□ -0.14
CCDC60-202ENST00000535685 THUMPD2Q9BTF0 503 aaKnown RBP14.2□□□□□ -0.14
CCDC60-202ENST00000535685 ZC3H4Q9UPT8 1303 aaKnown RBP14.19□□□□□ -0.14
CCDC60-202ENST00000535685 ERVV-1B6SEH8 477 aa14.19□□□□□ -0.14
CCDC60-202ENST00000535685 ZEB1P37275 1124 aaPredicted RBP14.19□□□□□ -0.14
CCDC60-202ENST00000535685 PIP4K2AP48426 406 aaPredicted RBP14.19□□□□□ -0.14
CCDC60-202ENST00000535685 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
CCDC60-202ENST00000535685 CNBD1Q8NA66 436 aa14.19□□□□□ -0.14
CCDC60-202ENST00000535685 RUNDC1Q96C34 613 aa14.19□□□□□ -0.14
CCDC60-202ENST00000535685 CREBZFQ9NS37 354 aa14.19□□□□□ -0.14
CCDC60-202ENST00000535685 SLX4Q8IY92 1834 aa14.18□□□□□ -0.14
CCDC60-202ENST00000535685 KLRG2A4D1S0 409 aaPredicted RBP14.18□□□□□ -0.14
CCDC60-202ENST00000535685 KIF3CO14782 793 aa14.18□□□□□ -0.14
CCDC60-202ENST00000535685 ST5P78524 1137 aa14.18□□□□□ -0.14
CCDC60-202ENST00000535685 SRGNP10124 158 aa14.17□□□□□ -0.14
CCDC60-202ENST00000535685 WDR43Q15061 677 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC60-202ENST00000535685 STYK1Q6J9G0 422 aa14.17□□□□□ -0.14
CCDC60-202ENST00000535685 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
CCDC60-202ENST00000535685 TSPYL4Q9UJ04 414 aa14.17□□□□□ -0.14
CCDC60-202ENST00000535685 ADAMTS8Q9UP79 889 aa14.17□□□□□ -0.14
CCDC60-202ENST00000535685 CACNA1SQ13698 1873 aa14.16□□□□□ -0.14
CCDC60-202ENST00000535685 CHL1O00533 1208 aa14.16□□□□□ -0.14
CCDC60-202ENST00000535685 TPTE2Q6XPS3 522 aa14.16□□□□□ -0.14
CCDC60-202ENST00000535685 NBPF5PQ86XG9 351 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-202ENST00000535685 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
CCDC60-202ENST00000535685 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
CCDC60-202ENST00000535685 NIP7Q9Y221 180 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCDC60-202ENST00000535685 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
CCDC60-202ENST00000535685 IBTKQ9P2D0 1353 aaPredicted RBP14.15□□□□□ -0.14
CCDC60-202ENST00000535685 LMNB1P20700 586 aa14.15□□□□□ -0.14
CCDC60-202ENST00000535685 HLFQ16534 295 aa14.15□□□□□ -0.14
CCDC60-202ENST00000535685 LRP10Q7Z4F1 713 aa14.15□□□□□ -0.14
CCDC60-202ENST00000535685 MASTLQ96GX5 879 aa14.15□□□□□ -0.14
CCDC60-202ENST00000535685 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
CCDC60-202ENST00000535685 LTBP3Q9NS15 1303 aa14.15□□□□□ -0.15
CCDC60-202ENST00000535685 TNRC6CQ9HCJ0 1690 aaKnown RBP14.14□□□□□ -0.15
CCDC60-202ENST00000535685 PDIA6Q15084 440 aa14.14□□□□□ -0.15
CCDC60-202ENST00000535685 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
CCDC60-202ENST00000535685 ZNF526Q8TF50 670 aaPredicted RBP14.14□□□□□ -0.15
CCDC60-202ENST00000535685 ZNF622Q969S3 477 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC60-202ENST00000535685 RIC1Q4ADV7 1423 aa14.14□□□□□ -0.15
CCDC60-202ENST00000535685 SENP3-EIF4A1A0A087X0R7 540 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 NFKBIEO00221 500 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 NPHP1O15259 732 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 SOGA3Q5TF21 947 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 TTLL7Q6ZT98 887 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 CCDC146Q8IYE0 955 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 NYXQ9GZU5 481 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 RRP7AQ9Y3A4 280 aaKnown RBP14.13□□□□□ -0.15
CCDC60-202ENST00000535685 KDM2BQ8NHM5 1336 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
CCDC60-202ENST00000535685 TOMM70O94826 608 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms