RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ARHGAP45Q92619 1136 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 FRAT1Q92837 279 aaPredicted RBP19.86■□□□□ 0.77
CNN1-202ENST00000535659 PTPRCP08575 1304 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 ERVV-1B6SEH8 477 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 MSH5O43196 834 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 KSR2Q6VAB6 950 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 MAP3K15Q6ZN16 1313 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 KIF16BQ96L93 1317 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 TUBGCP6Q96RT7 1819 aa19.85■□□□□ 0.77
CNN1-202ENST00000535659 CACNA1FO60840 1977 aa19.85■□□□□ 0.77
CNN1-202ENST00000535659 PI4KAP2A4QPH2 592 aa19.85■□□□□ 0.77
CNN1-202ENST00000535659 CAMTA2O94983 1202 aa19.85■□□□□ 0.77
CNN1-202ENST00000535659 RIC3Q7Z5B4 369 aa19.85■□□□□ 0.77
CNN1-202ENST00000535659 PI4KAP1Q8N8J0 262 aa19.85■□□□□ 0.77
CNN1-202ENST00000535659 ZBTB3Q9H5J0 574 aa19.85■□□□□ 0.77
CNN1-202ENST00000535659 R3HDM1Q15032 1099 aaKnown RBP19.84■□□□□ 0.77
CNN1-202ENST00000535659 USPL1Q5W0Q7 1092 aa19.84■□□□□ 0.77
CNN1-202ENST00000535659 SRP68Q9UHB9 627 aaKnown RBP19.84■□□□□ 0.77
CNN1-202ENST00000535659 RGL2O15211 777 aa19.83■□□□□ 0.77
CNN1-202ENST00000535659 ZKSCAN2Q63HK3 967 aa19.83■□□□□ 0.77
CNN1-202ENST00000535659 MAP3K2Q9Y2U5 619 aa19.83■□□□□ 0.77
CNN1-202ENST00000535659 USP42Q9H9J4 1324 aaKnown RBP19.83■□□□□ 0.77
CNN1-202ENST00000535659 PSDA5PKW4 1024 aaPredicted RBP19.82■□□□□ 0.76
CNN1-202ENST00000535659 HLFQ16534 295 aa19.82■□□□□ 0.76
CNN1-202ENST00000535659 CLEC4GQ6UXB4 293 aa19.82■□□□□ 0.76
CNN1-202ENST00000535659 API5Q9BZZ5 524 aaKnown RBP19.82■□□□□ 0.76
CNN1-202ENST00000535659 QSER1Q2KHR3 1735 aa19.82■□□□□ 0.76
CNN1-202ENST00000535659 ATF7IPQ6VMQ6 1270 aa19.81■□□□□ 0.76
CNN1-202ENST00000535659 GIGYF2Q6Y7W6 1299 aaKnown RBP19.81■□□□□ 0.76
CNN1-202ENST00000535659 BCL2L12Q9HB09 334 aa19.81■□□□□ 0.76
CNN1-202ENST00000535659 F6X3S4 739 aa19.81■□□□□ 0.76
CNN1-202ENST00000535659 GYS1P13807 737 aa19.81■□□□□ 0.76
CNN1-202ENST00000535659 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.81■□□□□ 0.76
CNN1-202ENST00000535659 DNAAF4Q8WXU2 420 aa19.81■□□□□ 0.76
CNN1-202ENST00000535659 ZNF652Q9Y2D9 606 aa19.81■□□□□ 0.76
CNN1-202ENST00000535659 C4AP0C0L4 1744 aa19.81■□□□□ 0.76
CNN1-202ENST00000535659 ADCY9O60503 1353 aa19.8■□□□□ 0.76
CNN1-202ENST00000535659 PLIN1O60240 522 aa19.8■□□□□ 0.76
CNN1-202ENST00000535659 TCIRG1Q13488 830 aa19.8■□□□□ 0.76
CNN1-202ENST00000535659 SLC16A10Q8TF71 515 aa19.8■□□□□ 0.76
CNN1-202ENST00000535659 METTL22Q9BUU2 404 aaPredicted RBP19.8■□□□□ 0.76
CNN1-202ENST00000535659 PDGFDQ9GZP0 370 aaPredicted RBP19.8■□□□□ 0.76
CNN1-202ENST00000535659 TRIM27P14373 513 aa19.79■□□□□ 0.76
CNN1-202ENST00000535659 HSP90AB3PQ58FF7 597 aa19.79■□□□□ 0.76
CNN1-202ENST00000535659 NLGN1Q8N2Q7 840 aa19.79■□□□□ 0.76
CNN1-202ENST00000535659 SUPT16HQ9Y5B9 1047 aaKnown RBP19.79■□□□□ 0.76
CNN1-202ENST00000535659 FKBP8Q14318 412 aa19.78■□□□□ 0.76
CNN1-202ENST00000535659 SLC4A10Q6U841 1118 aa19.78■□□□□ 0.76
CNN1-202ENST00000535659 NEXNQ0ZGT2 675 aa19.77■□□□□ 0.76
CNN1-202ENST00000535659 MYD88Q99836 296 aa19.77■□□□□ 0.76
CNN1-202ENST00000535659 BCORQ6W2J9 1755 aa19.77■□□□□ 0.76
CNN1-202ENST00000535659 SCN7AQ01118 1682 aa19.77■□□□□ 0.75
CNN1-202ENST00000535659 MS4A1P11836 297 aa19.76■□□□□ 0.75
CNN1-202ENST00000535659 ZNF34Q8IZ26 560 aa19.76■□□□□ 0.75
CNN1-202ENST00000535659 CLUAP1Q96AJ1 413 aa19.76■□□□□ 0.75
CNN1-202ENST00000535659 TNNQ9UQP3 1299 aa19.76■□□□□ 0.75
CNN1-202ENST00000535659 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
CNN1-202ENST00000535659 TBC1D9BQ66K14 1250 aa19.76■□□□□ 0.75
CNN1-202ENST00000535659 DZIP1LQ8IYY4 767 aaKnown RBP19.76■□□□□ 0.75
CNN1-202ENST00000535659 ISCA1Q9BUE6 129 aa19.76■□□□□ 0.75
CNN1-202ENST00000535659 RNF123Q5XPI4 1314 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 TM4SF1P30408 202 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 TRIM28Q13263 835 aaKnown RBP19.75■□□□□ 0.75
CNN1-202ENST00000535659 BEND3Q5T5X7 828 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 BICDL1Q6ZP65 573 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 LINS1Q8NG48 757 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 SETDB2Q96T68 719 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 NIP7Q9Y221 180 aaKnown RBP eCLIP19.75■□□□□ 0.75
CNN1-202ENST00000535659 ARFGEF2Q9Y6D5 1785 aa19.75■□□□□ 0.75
CNN1-202ENST00000535659 IGKV5-2P06315 115 aa19.74■□□□□ 0.75
CNN1-202ENST00000535659 ABCC4O15439 1325 aa19.73■□□□□ 0.75
CNN1-202ENST00000535659 GPTP24298 496 aa19.73■□□□□ 0.75
CNN1-202ENST00000535659 CCT4P50991 539 aaKnown RBP19.73■□□□□ 0.75
CNN1-202ENST00000535659 PDE3AQ14432 1141 aa19.73■□□□□ 0.75
CNN1-202ENST00000535659 NFIXQ14938 502 aa19.73■□□□□ 0.75
CNN1-202ENST00000535659 FTSJ3Q8IY81 847 aaKnown RBP19.73■□□□□ 0.75
CNN1-202ENST00000535659 SRCIN1Q9C0H9 1055 aa19.73■□□□□ 0.75
CNN1-202ENST00000535659 CWF19L2Q2TBE0 894 aaKnown RBP19.72■□□□□ 0.75
CNN1-202ENST00000535659 MSL1Q68DK7 614 aa19.72■□□□□ 0.75
CNN1-202ENST00000535659 INTS3Q68E01 1043 aaKnown RBP19.72■□□□□ 0.75
CNN1-202ENST00000535659 CCDC191Q8NCU4 936 aa19.72■□□□□ 0.75
CNN1-202ENST00000535659 ATP10DQ9P241 1426 aa19.72■□□□□ 0.75
CNN1-202ENST00000535659 CASZ1Q86V15 1759 aa19.72■□□□□ 0.75
CNN1-202ENST00000535659 ALDH1L1O75891 902 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 RLBP1P12271 317 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 PARP10Q53GL7 1025 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 NLRP10Q86W26 655 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 PANK1Q8TE04 598 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 MTFR1LQ9H019 292 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 NUP98P52948 1817 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 NEURL1BA8MQ27 555 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 ZBTB7AO95365 584 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 TMEM57Q8N5G2 664 aa19.71■□□□□ 0.75
CNN1-202ENST00000535659 CWC25Q9NXE8 425 aaPredicted RBP19.71■□□□□ 0.75
CNN1-202ENST00000535659 C20orf194Q5TEA3 1177 aa19.7■□□□□ 0.74
CNN1-202ENST00000535659 SUSD4Q5VX71 490 aa19.7■□□□□ 0.74
CNN1-202ENST00000535659 ATF5Q9Y2D1 282 aaPredicted RBP19.7■□□□□ 0.74
CNN1-202ENST00000535659 UBN2Q6ZU65 1347 aa19.69■□□□□ 0.74
CNN1-202ENST00000535659 PXDNLA1KZ92 1463 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms