RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 PDRG1Q9NUG6 133 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 F13A1P00488 732 aa16.68■□□□□ 0.26
LPCAT3-203ENST00000535479 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
LPCAT3-203ENST00000535479 CCDC129Q6ZRS4 1044 aa16.68■□□□□ 0.26
LPCAT3-203ENST00000535479 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
LPCAT3-203ENST00000535479 NOLC1Q14978 699 aaKnown RBP eCLIP16.68■□□□□ 0.26
LPCAT3-203ENST00000535479 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
LPCAT3-203ENST00000535479 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
LPCAT3-203ENST00000535479 LIMCH1Q9UPQ0 1083 aa16.67■□□□□ 0.26
LPCAT3-203ENST00000535479 RAD50Q92878 1312 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 OVOS2A0A0J9YW53 1432 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 OVOS2Q6IE36 1432 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 JAK2O60674 1132 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 PTGS1P23219 599 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 CCDC183Q5T5S1 534 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 TTC14Q96N46 770 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 SEC62Q99442 399 aaKnown RBP16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 KCNF1Q9H3M0 494 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 HYPKQ9NX55 129 aa16.66■□□□□ 0.26
LPCAT3-203ENST00000535479 KCNA6P17658 529 aa16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 NMIQ13287 307 aaPredicted RBP16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 ZNF710Q8N1W2 664 aa16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 FLT4P35916 1363 aa16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 MTMR6Q9Y217 621 aa16.65■□□□□ 0.26
LPCAT3-203ENST00000535479 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 TEFQ10587 303 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 ZNF530Q6P9A1 599 aaPredicted RBP16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 TTC6Q86TZ1 520 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 ZNF589Q86UQ0 364 aaPredicted RBP16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 RAB11FIP4Q86YS3 637 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 STAP2Q9UGK3 403 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 RBM8AQ9Y5S9 174 aaKnown RBP16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 GUCY1B3Q02153 619 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 BEND3Q5T5X7 828 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 ZBTB9Q96C00 473 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 KIF1BPQ96EK5 621 aa16.64■□□□□ 0.25
LPCAT3-203ENST00000535479 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 CHST3Q7LGC8 479 aa16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 MCM2P49736 904 aa16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 ARID5BQ14865 1188 aa16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 ZNF592Q92610 1267 aa16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 EAF2Q96CJ1 260 aaPredicted RBP16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 INTS4Q96HW7 963 aaKnown RBP16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 C16orf45Q96MC5 204 aaPredicted RBP16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
LPCAT3-203ENST00000535479 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
LPCAT3-203ENST00000535479 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
LPCAT3-203ENST00000535479 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
LPCAT3-203ENST00000535479 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
LPCAT3-203ENST00000535479 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
LPCAT3-203ENST00000535479 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
LPCAT3-203ENST00000535479 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
LPCAT3-203ENST00000535479 MAP3K5Q99683 1374 aa16.61■□□□□ 0.25
LPCAT3-203ENST00000535479 NPHP1O15259 732 aa16.61■□□□□ 0.25
LPCAT3-203ENST00000535479 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
LPCAT3-203ENST00000535479 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
LPCAT3-203ENST00000535479 ATP2B3Q16720 1220 aa16.61■□□□□ 0.25
LPCAT3-203ENST00000535479 CYP46A1Q9Y6A2 500 aa16.61■□□□□ 0.25
LPCAT3-203ENST00000535479 ANAPC15P60006 121 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 UBE2HP62256 183 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 SBNO1A3KN83 1393 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 TNRQ92752 1358 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 CREB3L3Q68CJ9 461 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 C3P01024 1663 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
LPCAT3-203ENST00000535479 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 ATP5J2-PTCD1G3V325 749 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 PTCD1O75127 700 aaKnown RBP16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 EPHA10Q5JZY3 1008 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 RIOK3O14730 519 aaKnown RBP16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 SASH1O94885 1247 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 POLA2Q14181 598 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 PTPN21Q16825 1174 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
LPCAT3-203ENST00000535479 ARHGEF10O15013 1369 aa16.58■□□□□ 0.25
LPCAT3-203ENST00000535479 ADAMTS13Q76LX8 1427 aa16.58■□□□□ 0.25
LPCAT3-203ENST00000535479 PHF14O94880 888 aa16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 U2AF2P26368 475 aaKnown RBP eCLIP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms