RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
KNTC1-208ENST00000535410 N4BP2Q86UW6 1770 aaPredicted RBP15.5■□□□□ 0.07
KNTC1-208ENST00000535410 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
KNTC1-208ENST00000535410 SOGA3Q5TF21 947 aa15.5■□□□□ 0.07
KNTC1-208ENST00000535410 STYK1Q6J9G0 422 aa15.5■□□□□ 0.07
KNTC1-208ENST00000535410 NGEFQ8N5V2 710 aa15.5■□□□□ 0.07
KNTC1-208ENST00000535410 MAP3K15Q6ZN16 1313 aa15.49■□□□□ 0.07
KNTC1-208ENST00000535410 CHL1O00533 1208 aa15.49■□□□□ 0.07
KNTC1-208ENST00000535410 MYL6BP14649 208 aa15.49■□□□□ 0.07
KNTC1-208ENST00000535410 C9orf131Q5VYM1 1079 aa15.49■□□□□ 0.07
KNTC1-208ENST00000535410 ZNF526Q8TF50 670 aaPredicted RBP15.49■□□□□ 0.07
KNTC1-208ENST00000535410 MASTLQ96GX5 879 aa15.49■□□□□ 0.07
KNTC1-208ENST00000535410 CHMP4AQ9BY43 222 aa15.49■□□□□ 0.07
KNTC1-208ENST00000535410 LAS1LQ9Y4W2 734 aaKnown RBP15.49■□□□□ 0.07
KNTC1-208ENST00000535410 EIF2S2P20042 333 aaKnown RBP15.48■□□□□ 0.07
KNTC1-208ENST00000535410 RNF181Q9P0P0 153 aa15.48■□□□□ 0.07
KNTC1-208ENST00000535410 NRXN2Q9P2S2 1712 aa15.48■□□□□ 0.07
KNTC1-208ENST00000535410 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
KNTC1-208ENST00000535410 ZC3H4Q9UPT8 1303 aaKnown RBP15.47■□□□□ 0.07
KNTC1-208ENST00000535410 ANP32CO43423 234 aa15.47■□□□□ 0.07
KNTC1-208ENST00000535410 SRGNP10124 158 aa15.47■□□□□ 0.07
KNTC1-208ENST00000535410 KIAA1551Q9HCM1 1747 aa15.47■□□□□ 0.07
KNTC1-208ENST00000535410 TRIM35Q9UPQ4 493 aa15.47■□□□□ 0.07
KNTC1-208ENST00000535410 SCN7AQ01118 1682 aa15.47■□□□□ 0.07
KNTC1-208ENST00000535410 DLG5Q8TDM6 1919 aa15.47■□□□□ 0.07
KNTC1-208ENST00000535410 HOXB7P09629 217 aa15.46■□□□□ 0.07
KNTC1-208ENST00000535410 NPR1P16066 1061 aa15.46■□□□□ 0.07
KNTC1-208ENST00000535410 LMNB1P20700 586 aa15.46■□□□□ 0.07
KNTC1-208ENST00000535410 HLFQ16534 295 aa15.46■□□□□ 0.07
KNTC1-208ENST00000535410 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
KNTC1-208ENST00000535410 PARP10Q53GL7 1025 aa15.45■□□□□ 0.06
KNTC1-208ENST00000535410 HSP90AB3PQ58FF7 597 aa15.45■□□□□ 0.06
KNTC1-208ENST00000535410 GIGYF2Q6Y7W6 1299 aaKnown RBP15.45■□□□□ 0.06
KNTC1-208ENST00000535410 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
KNTC1-208ENST00000535410 CCDC24Q8N4L8 307 aa15.45■□□□□ 0.06
KNTC1-208ENST00000535410 KDM3BQ7LBC6 1761 aa15.44■□□□□ 0.06
KNTC1-208ENST00000535410 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
KNTC1-208ENST00000535410 APAF1O14727 1248 aa15.44■□□□□ 0.06
KNTC1-208ENST00000535410 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
KNTC1-208ENST00000535410 C16orf71Q8IYS4 520 aaPredicted RBP15.44■□□□□ 0.06
KNTC1-208ENST00000535410 ZBTB3Q9H5J0 574 aa15.44■□□□□ 0.06
KNTC1-208ENST00000535410 AFDNP55196 1824 aaKnown RBP15.44■□□□□ 0.06
KNTC1-208ENST00000535410 ARFGEF1Q9Y6D6 1849 aa15.44■□□□□ 0.06
KNTC1-208ENST00000535410 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
KNTC1-208ENST00000535410 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
KNTC1-208ENST00000535410 C21orf2O43822 256 aa15.43■□□□□ 0.06
KNTC1-208ENST00000535410 GNAI1P63096 354 aa15.43■□□□□ 0.06
KNTC1-208ENST00000535410 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
KNTC1-208ENST00000535410 DDX21Q9NR30 783 aaKnown RBP eCLIP15.43■□□□□ 0.06
KNTC1-208ENST00000535410 BRCA1P38398 1863 aaKnown RBP15.43■□□□□ 0.06
KNTC1-208ENST00000535410 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
KNTC1-208ENST00000535410 PRPF40BQ6NWY9 871 aaKnown RBP15.42■□□□□ 0.06
KNTC1-208ENST00000535410 IFT57Q9NWB7 429 aa15.42■□□□□ 0.06
KNTC1-208ENST00000535410 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
KNTC1-208ENST00000535410 IBTKQ9P2D0 1353 aaPredicted RBP15.41■□□□□ 0.06
KNTC1-208ENST00000535410 PDIA6Q15084 440 aa15.41■□□□□ 0.06
KNTC1-208ENST00000535410 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
KNTC1-208ENST00000535410 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
KNTC1-208ENST00000535410 TAOK3Q9H2K8 898 aa15.41■□□□□ 0.06
KNTC1-208ENST00000535410 LAMB4A4D0S4 1761 aa15.41■□□□□ 0.06
KNTC1-208ENST00000535410 LTBP3Q9NS15 1303 aa15.41■□□□□ 0.06
KNTC1-208ENST00000535410 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 TOMM70O94826 608 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 GPTP24298 496 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 GRIPAP1Q4V328 841 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 COPS6Q7L5N1 327 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 RTKN2Q8IZC4 609 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 UTP14AQ9BVJ6 771 aaKnown RBP15.4■□□□□ 0.06
KNTC1-208ENST00000535410 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
KNTC1-208ENST00000535410 HYPKQ9NX55 129 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
KNTC1-208ENST00000535410 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
KNTC1-208ENST00000535410 KIF3CO14782 793 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 RASSF7Q02833 373 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 AIMP1Q12904 312 aaKnown RBP15.39■□□□□ 0.05
KNTC1-208ENST00000535410 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
KNTC1-208ENST00000535410 CCDC93Q567U6 631 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 SUSD4Q5VX71 490 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 DUSP27Q5VZP5 1158 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 CC2D2BQ6DHV5 1058 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 NECTIN2Q92692 538 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 RPGRQ92834 1020 aaKnown RBP15.39■□□□□ 0.05
KNTC1-208ENST00000535410 NLRP3Q96P20 1036 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
KNTC1-208ENST00000535410 GLTPD2A6NH11 291 aa15.38■□□□□ 0.05
KNTC1-208ENST00000535410 NFKBIEO00221 500 aa15.38■□□□□ 0.05
KNTC1-208ENST00000535410 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
KNTC1-208ENST00000535410 ERFEQ4G0M1 354 aa15.38■□□□□ 0.05
KNTC1-208ENST00000535410 LRP10Q7Z4F1 713 aa15.38■□□□□ 0.05
KNTC1-208ENST00000535410 XAGE3Q8WTP9 111 aa15.38■□□□□ 0.05
KNTC1-208ENST00000535410 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
KNTC1-208ENST00000535410 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
KNTC1-208ENST00000535410 CCDC27Q2M243 656 aa15.37■□□□□ 0.05
KNTC1-208ENST00000535410 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
KNTC1-208ENST00000535410 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
KNTC1-208ENST00000535410 NUTM1Q86Y26 1132 aa15.37■□□□□ 0.05
KNTC1-208ENST00000535410 PLBD2Q8NHP8 589 aa15.37■□□□□ 0.05
KNTC1-208ENST00000535410 NMRK2Q9NPI5 230 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms