RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 ZNF652Q9Y2D9 606 aa23.36■■□□□ 1.33
CAPRIN1-217ENST00000534825 DALRD3Q5D0E6 543 aaKnown RBP23.35■■□□□ 1.33
CAPRIN1-217ENST00000534825 BRIP1Q9BX63 1249 aa23.35■■□□□ 1.33
CAPRIN1-217ENST00000534825 PROSER3Q2NL68 480 aa23.34■■□□□ 1.33
CAPRIN1-217ENST00000534825 MBIPQ9NS73 344 aa23.34■■□□□ 1.33
CAPRIN1-217ENST00000534825 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
CAPRIN1-217ENST00000534825 MAP3K15Q6ZN16 1313 aa23.33■■□□□ 1.33
CAPRIN1-217ENST00000534825 C2CD5Q86YS7 1000 aa23.33■■□□□ 1.33
CAPRIN1-217ENST00000534825 NIP7Q9Y221 180 aaKnown RBP eCLIP23.33■■□□□ 1.33
CAPRIN1-217ENST00000534825 H0YIN7 160 aa23.32■■□□□ 1.32
CAPRIN1-217ENST00000534825 ANXA1P04083 346 aa23.32■■□□□ 1.32
CAPRIN1-217ENST00000534825 CNBD1Q8NA66 436 aa23.32■■□□□ 1.32
CAPRIN1-217ENST00000534825 IFT57Q9NWB7 429 aa23.32■■□□□ 1.32
CAPRIN1-217ENST00000534825 BRCA1P38398 1863 aaKnown RBP23.31■■□□□ 1.32
CAPRIN1-217ENST00000534825 PDE6BP35913 854 aa23.31■■□□□ 1.32
CAPRIN1-217ENST00000534825 ARHGAP27Q6ZUM4 889 aa23.31■■□□□ 1.32
CAPRIN1-217ENST00000534825 NECTIN2Q92692 538 aa23.31■■□□□ 1.32
CAPRIN1-217ENST00000534825 BCORQ6W2J9 1755 aa23.31■■□□□ 1.32
CAPRIN1-217ENST00000534825 SENP3-EIF4A1A0A087X0R7 540 aa23.3■■□□□ 1.32
CAPRIN1-217ENST00000534825 GNAI1P63096 354 aa23.3■■□□□ 1.32
CAPRIN1-217ENST00000534825 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
CAPRIN1-217ENST00000534825 CCDC27Q2M243 656 aa23.3■■□□□ 1.32
CAPRIN1-217ENST00000534825 TPTE2Q6XPS3 522 aa23.3■■□□□ 1.32
CAPRIN1-217ENST00000534825 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
CAPRIN1-217ENST00000534825 NBPF5PQ86XG9 351 aaPredicted RBP23.3■■□□□ 1.32
CAPRIN1-217ENST00000534825 HOXB7P09629 217 aa23.29■■□□□ 1.32
CAPRIN1-217ENST00000534825 DUSP27Q5VZP5 1158 aa23.29■■□□□ 1.32
CAPRIN1-217ENST00000534825 ZBTB3Q9H5J0 574 aa23.29■■□□□ 1.32
CAPRIN1-217ENST00000534825 PDZRN3Q9UPQ7 1066 aa23.29■■□□□ 1.32
CAPRIN1-217ENST00000534825 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
CAPRIN1-217ENST00000534825 WWC1Q8IX03 1113 aa23.28■■□□□ 1.32
CAPRIN1-217ENST00000534825 TTLL6Q8N841 843 aa23.28■■□□□ 1.32
CAPRIN1-217ENST00000534825 DDX21Q9NR30 783 aaKnown RBP eCLIP23.28■■□□□ 1.32
CAPRIN1-217ENST00000534825 ST5P78524 1137 aa23.27■■□□□ 1.32
CAPRIN1-217ENST00000534825 GIGYF2Q6Y7W6 1299 aaKnown RBP23.27■■□□□ 1.32
CAPRIN1-217ENST00000534825 COPS6Q7L5N1 327 aa23.27■■□□□ 1.32
CAPRIN1-217ENST00000534825 ZNF34Q8IZ26 560 aa23.27■■□□□ 1.32
CAPRIN1-217ENST00000534825 KLRG2A4D1S0 409 aaPredicted RBP23.26■■□□□ 1.31
CAPRIN1-217ENST00000534825 NPHP1O15259 732 aa23.26■■□□□ 1.31
CAPRIN1-217ENST00000534825 FAM177BA6PVY3 158 aa23.25■■□□□ 1.31
CAPRIN1-217ENST00000534825 SRGNP10124 158 aa23.25■■□□□ 1.31
CAPRIN1-217ENST00000534825 HDGFL1Q5TGJ6 251 aa23.25■■□□□ 1.31
CAPRIN1-217ENST00000534825 XAGE3Q8WTP9 111 aa23.25■■□□□ 1.31
CAPRIN1-217ENST00000534825 ZNF622Q969S3 477 aaKnown RBP eCLIP23.25■■□□□ 1.316e-18■■□□□ 12.1
CAPRIN1-217ENST00000534825 CHPF2Q9P2E5 772 aa23.25■■□□□ 1.31
CAPRIN1-217ENST00000534825 ADCY9O60503 1353 aa23.25■■□□□ 1.31
CAPRIN1-217ENST00000534825 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
CAPRIN1-217ENST00000534825 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
CAPRIN1-217ENST00000534825 UBN2Q6ZU65 1347 aa23.24■■□□□ 1.31
CAPRIN1-217ENST00000534825 ATP10DQ9P241 1426 aa23.24■■□□□ 1.31
CAPRIN1-217ENST00000534825 GPTP24298 496 aa23.23■■□□□ 1.31
CAPRIN1-217ENST00000534825 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
CAPRIN1-217ENST00000534825 SUSD4Q5VX71 490 aa23.23■■□□□ 1.31
CAPRIN1-217ENST00000534825 ELL2O00472 640 aaPredicted RBP23.22■■□□□ 1.31
CAPRIN1-217ENST00000534825 STYK1Q6J9G0 422 aa23.22■■□□□ 1.31
CAPRIN1-217ENST00000534825 DBF4Q9UBU7 674 aaPredicted RBP23.22■■□□□ 1.31
CAPRIN1-217ENST00000534825 ARFGEF1Q9Y6D6 1849 aa23.22■■□□□ 1.31
CAPRIN1-217ENST00000534825 NUTM1Q86Y26 1132 aa23.21■■□□□ 1.31
CAPRIN1-217ENST00000534825 FAM9BQ8IZU0 186 aa23.21■■□□□ 1.31
CAPRIN1-217ENST00000534825 MASTLQ96GX5 879 aa23.21■■□□□ 1.31
CAPRIN1-217ENST00000534825 NUP98P52948 1817 aa23.21■■□□□ 1.31
CAPRIN1-217ENST00000534825 NYXQ9GZU5 481 aa23.2■■□□□ 1.3
CAPRIN1-217ENST00000534825 IL16Q14005 1332 aa23.19■■□□□ 1.3
CAPRIN1-217ENST00000534825 GTF2E1P29083 439 aaPredicted RBP23.19■■□□□ 1.3
CAPRIN1-217ENST00000534825 ERFEQ4G0M1 354 aa23.19■■□□□ 1.3
CAPRIN1-217ENST00000534825 TSPYL6Q8N831 410 aa23.19■■□□□ 1.3
CAPRIN1-217ENST00000534825 TSR2Q969E8 191 aaKnown RBP23.19■■□□□ 1.3
CAPRIN1-217ENST00000534825 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
CAPRIN1-217ENST00000534825 NTSR2O95665 410 aa23.18■■□□□ 1.3
CAPRIN1-217ENST00000534825 TCIRG1Q13488 830 aa23.18■■□□□ 1.3
CAPRIN1-217ENST00000534825 PARP10Q53GL7 1025 aa23.18■■□□□ 1.3
CAPRIN1-217ENST00000534825 C9orf131Q5VYM1 1079 aa23.18■■□□□ 1.3
CAPRIN1-217ENST00000534825 HYPKQ9NX55 129 aa23.18■■□□□ 1.3
CAPRIN1-217ENST00000534825 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
CAPRIN1-217ENST00000534825 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
CAPRIN1-217ENST00000534825 C21orf2O43822 256 aa23.17■■□□□ 1.3
CAPRIN1-217ENST00000534825 NPR1P16066 1061 aa23.17■■□□□ 1.3
CAPRIN1-217ENST00000534825 PRELPP51888 382 aa23.17■■□□□ 1.3
CAPRIN1-217ENST00000534825 ANKRD13DQ6ZTN6 518 aa23.17■■□□□ 1.3
CAPRIN1-217ENST00000534825 PLBD2Q8NHP8 589 aa23.17■■□□□ 1.3
CAPRIN1-217ENST00000534825 IBTKQ9P2D0 1353 aaPredicted RBP23.16■■□□□ 1.3
CAPRIN1-217ENST00000534825 CRY2Q49AN0 593 aa23.16■■□□□ 1.3
CAPRIN1-217ENST00000534825 HSP90AB3PQ58FF7 597 aa23.16■■□□□ 1.3
CAPRIN1-217ENST00000534825 PPP1R42Q7Z4L9 355 aa23.16■■□□□ 1.3
CAPRIN1-217ENST00000534825 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
CAPRIN1-217ENST00000534825 C7orf43Q8WVR3 580 aa23.16■■□□□ 1.3
CAPRIN1-217ENST00000534825 ABCC12Q96J65 1359 aa23.15■■□□□ 1.3
CAPRIN1-217ENST00000534825 NFKBIEO00221 500 aa23.15■■□□□ 1.3
CAPRIN1-217ENST00000534825 PRPF40BQ6NWY9 871 aaKnown RBP23.15■■□□□ 1.3
CAPRIN1-217ENST00000534825 NLRP10Q86W26 655 aa23.15■■□□□ 1.3
CAPRIN1-217ENST00000534825 COL11A2P13942 1736 aaPredicted RBP23.14■■□□□ 1.3
CAPRIN1-217ENST00000534825 RASSF7Q02833 373 aa23.14■■□□□ 1.29
CAPRIN1-217ENST00000534825 SLC10A5Q5PT55 438 aa23.14■■□□□ 1.29
CAPRIN1-217ENST00000534825 UTP14AQ9BVJ6 771 aaKnown RBP23.14■■□□□ 1.29
CAPRIN1-217ENST00000534825 PHAXQ9H814 394 aaKnown RBP23.14■■□□□ 1.29
CAPRIN1-217ENST00000534825 ZNF219Q9P2Y4 722 aaPredicted RBP23.14■■□□□ 1.29
CAPRIN1-217ENST00000534825 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
CAPRIN1-217ENST00000534825 GPBP1L1Q9HC44 474 aaPredicted RBP23.13■■□□□ 1.29
CAPRIN1-217ENST00000534825 RNF181Q9P0P0 153 aa23.13■■□□□ 1.29
CAPRIN1-217ENST00000534825 CCDC30Q5VVM6 783 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms