RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 OSBPL3Q9H4L5 887 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 A0A1W2PRU2 124 aa8.15□□□□□ -1.1
ATM-224ENST00000534625 KIF3BO15066 747 aa8.15□□□□□ -1.1
ATM-224ENST00000534625 TRAK2O60296 914 aa8.15□□□□□ -1.1
ATM-224ENST00000534625 MAP3K10Q02779 954 aa8.15□□□□□ -1.1
ATM-224ENST00000534625 XP32Q5T750 250 aa8.15□□□□□ -1.1
ATM-224ENST00000534625 CUEDC1Q9NWM3 386 aaPredicted RBP8.15□□□□□ -1.1
ATM-224ENST00000534625 TSPY4P0CV99 314 aa8.14□□□□□ -1.11
ATM-224ENST00000534625 TSPY10P0CW01 314 aa8.14□□□□□ -1.11
ATM-224ENST00000534625 GAS6Q14393 721 aa8.14□□□□□ -1.11
ATM-224ENST00000534625 LYSMD3Q7Z3D4 306 aa8.14□□□□□ -1.11
ATM-224ENST00000534625 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
ATM-224ENST00000534625 CDCA7Q9BWT1 371 aaPredicted RBP8.14□□□□□ -1.11
ATM-224ENST00000534625 CAMSAP1Q5T5Y3 1602 aa8.14□□□□□ -1.11
ATM-224ENST00000534625 ARHGEF5Q12774 1597 aa8.14□□□□□ -1.11
ATM-224ENST00000534625 MAP3K1Q13233 1512 aa8.13□□□□□ -1.11
ATM-224ENST00000534625 CNTNAP5Q8WYK1 1306 aa8.13□□□□□ -1.11
ATM-224ENST00000534625 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
ATM-224ENST00000534625 PRICKLE2Q7Z3G6 844 aa8.13□□□□□ -1.11
ATM-224ENST00000534625 PHTF2Q8N3S3 785 aa8.13□□□□□ -1.11
ATM-224ENST00000534625 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
ATM-224ENST00000534625 GDPD2Q9HCC8 539 aa8.13□□□□□ -1.11
ATM-224ENST00000534625 LTBP4Q8N2S1 1624 aa8.12□□□□□ -1.11
ATM-224ENST00000534625 MSTNO14793 375 aa8.12□□□□□ -1.11
ATM-224ENST00000534625 GPC1P35052 558 aa8.12□□□□□ -1.11
ATM-224ENST00000534625 MCM6Q14566 821 aa8.12□□□□□ -1.11
ATM-224ENST00000534625 PLA2G4EQ3MJ16 856 aa8.12□□□□□ -1.11
ATM-224ENST00000534625 MYO3AQ8NEV4 1616 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 WASHC2CQ9Y4E1 1318 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 MEN1O00255 615 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 ADAM23O75077 832 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 ITGB2P05107 769 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 RHOQP17081 205 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 VAC14Q08AM6 782 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 ENAMQ9NRM1 1142 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 PLA2R1Q13018 1463 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 ZNF142P52746 1687 aaPredicted RBP8.11□□□□□ -1.11
ATM-224ENST00000534625 MYOM3Q5VTT5 1437 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 MIA2Q96PC5 1412 aa8.11□□□□□ -1.11
ATM-224ENST00000534625 TNRQ92752 1358 aa8.1□□□□□ -1.11
ATM-224ENST00000534625 CEP170BQ9Y4F5 1589 aaPredicted RBP8.1□□□□□ -1.11
ATM-224ENST00000534625 CLN3Q13286 438 aa8.1□□□□□ -1.11
ATM-224ENST00000534625 DCAF5Q96JK2 942 aa8.1□□□□□ -1.11
ATM-224ENST00000534625 SPOCK3Q9BQ16 436 aa8.1□□□□□ -1.11
ATM-224ENST00000534625 GRIP2Q9C0E4 1043 aa8.1□□□□□ -1.11
ATM-224ENST00000534625 A2ML1A8K2U0 1454 aa8.1□□□□□ -1.11
ATM-224ENST00000534625 PZPP20742 1482 aa8.1□□□□□ -1.11
ATM-224ENST00000534625 TCOF1Q13428 1488 aaKnown RBP8.1□□□□□ -1.11
ATM-224ENST00000534625 KDM5DQ9BY66 1539 aa8.09□□□□□ -1.11
ATM-224ENST00000534625 FAM135AQ9P2D6 1515 aa8.09□□□□□ -1.11
ATM-224ENST00000534625 ZNF335Q9H4Z2 1342 aaPredicted RBP8.09□□□□□ -1.11
ATM-224ENST00000534625 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATM-224ENST00000534625 ARHGEF10LQ9HCE6 1279 aa8.09□□□□□ -1.11
ATM-224ENST00000534625 PRM3Q9NNZ6 103 aa8.09□□□□□ -1.11
ATM-224ENST00000534625 CHIC2Q9UKJ5 165 aa8.09□□□□□ -1.11
ATM-224ENST00000534625 MAST1Q9Y2H9 1570 aa8.09□□□□□ -1.11
ATM-224ENST00000534625 DNMT1P26358 1616 aaKnown RBP8.08□□□□□ -1.12
ATM-224ENST00000534625 IL2RAP01589 272 aa8.08□□□□□ -1.12
ATM-224ENST00000534625 ABL2P42684 1182 aa8.08□□□□□ -1.12
ATM-224ENST00000534625 POU4F2Q12837 409 aa8.08□□□□□ -1.12
ATM-224ENST00000534625 RAB6BQ9NRW1 208 aa8.08□□□□□ -1.12
ATM-224ENST00000534625 HRH3Q9Y5N1 445 aa8.08□□□□□ -1.12
ATM-224ENST00000534625 ABCC5O15440 1437 aa8.07□□□□□ -1.12
ATM-224ENST00000534625 PHF20L1A8MW92 1017 aa8.07□□□□□ -1.12
ATM-224ENST00000534625 GPR25O00155 361 aa8.07□□□□□ -1.12
ATM-224ENST00000534625 GNRH1P01148 92 aa8.07□□□□□ -1.12
ATM-224ENST00000534625 BEND7Q8N7W2 519 aaPredicted RBP8.07□□□□□ -1.12
ATM-224ENST00000534625 NLRP3Q96P20 1036 aa8.07□□□□□ -1.12
ATM-224ENST00000534625 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
ATM-224ENST00000534625 RNF17Q9BXT8 1623 aaKnown RBP8.07□□□□□ -1.12
ATM-224ENST00000534625 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
ATM-224ENST00000534625 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
ATM-224ENST00000534625 NEDD1Q8NHV4 660 aa8.06□□□□□ -1.12
ATM-224ENST00000534625 ESYT1Q9BSJ8 1104 aa8.06□□□□□ -1.12
ATM-224ENST00000534625 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
ATM-224ENST00000534625 ABCC3O15438 1527 aa8.06□□□□□ -1.12
ATM-224ENST00000534625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATM-224ENST00000534625 NLRP1Q9C000 1473 aa8.06□□□□□ -1.12
ATM-224ENST00000534625 CFAP65Q6ZU64 1925 aaKnown RBP8.05□□□□□ -1.12
ATM-224ENST00000534625 STAU1O95793 577 aaKnown RBP8.05□□□□□ -1.12
ATM-224ENST00000534625 PROCP04070 461 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 DBN1Q16643 649 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 SLC27A3Q5K4L6 730 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 NBPF10Q6P3W6 841 aaKnown RBP8.05□□□□□ -1.12
ATM-224ENST00000534625 ANKLE2Q86XL3 938 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 THEMISQ8N1K5 641 aaPredicted RBP8.05□□□□□ -1.12
ATM-224ENST00000534625 NBPF15Q8N660 670 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 CNKSR1Q969H4 720 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 ZNF837Q96EG3 531 aaPredicted RBP8.05□□□□□ -1.12
ATM-224ENST00000534625 XAGE2Q96GT9 111 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 RRP7BPQ9NSQ0 103 aa8.05□□□□□ -1.12
ATM-224ENST00000534625 DUOX2Q9NRD8 1548 aa8.04□□□□□ -1.12
ATM-224ENST00000534625 MROH1Q8NDA8 1641 aa8.04□□□□□ -1.12
ATM-224ENST00000534625 PTPN23Q9H3S7 1636 aa8.04□□□□□ -1.12
ATM-224ENST00000534625 EIF2AK4Q9P2K8 1649 aaKnown RBP8.04□□□□□ -1.12
ATM-224ENST00000534625 MYCP01106 439 aaPredicted RBP8.04□□□□□ -1.12
ATM-224ENST00000534625 BCRP11274 1271 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms