RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 CNBD1Q8NA66 436 aa16.6■□□□□ 0.25
SCUBE2-213ENST00000534295 CNKSR1Q969H4 720 aa16.6■□□□□ 0.25
SCUBE2-213ENST00000534295 CREBZFQ9NS37 354 aa16.6■□□□□ 0.25
SCUBE2-213ENST00000534295 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
SCUBE2-213ENST00000534295 SRGNP10124 158 aa16.59■□□□□ 0.25
SCUBE2-213ENST00000534295 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
SCUBE2-213ENST00000534295 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
SCUBE2-213ENST00000534295 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
SCUBE2-213ENST00000534295 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
SCUBE2-213ENST00000534295 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.24
SCUBE2-213ENST00000534295 C7orf43Q8WVR3 580 aa16.58■□□□□ 0.24
SCUBE2-213ENST00000534295 TAOK3Q9H2K8 898 aa16.58■□□□□ 0.24
SCUBE2-213ENST00000534295 NUDCQ9Y266 331 aa16.58■□□□□ 0.24
SCUBE2-213ENST00000534295 FER1L6Q2WGJ9 1857 aa16.58■□□□□ 0.24
SCUBE2-213ENST00000534295 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
SCUBE2-213ENST00000534295 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
SCUBE2-213ENST00000534295 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
SCUBE2-213ENST00000534295 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
SCUBE2-213ENST00000534295 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
SCUBE2-213ENST00000534295 CACNA1SQ13698 1873 aa16.56■□□□□ 0.24
SCUBE2-213ENST00000534295 RGL2O15211 777 aa16.56■□□□□ 0.24
SCUBE2-213ENST00000534295 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
SCUBE2-213ENST00000534295 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
SCUBE2-213ENST00000534295 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
SCUBE2-213ENST00000534295 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
SCUBE2-213ENST00000534295 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
SCUBE2-213ENST00000534295 PASKQ96RG2 1323 aa16.55■□□□□ 0.24
SCUBE2-213ENST00000534295 PCNTO95613 3336 aa16.55■□□□□ 0.24
SCUBE2-213ENST00000534295 KCNQ3O43525 872 aa16.55■□□□□ 0.24
SCUBE2-213ENST00000534295 CAPN15O75808 1086 aa16.55■□□□□ 0.24
SCUBE2-213ENST00000534295 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
SCUBE2-213ENST00000534295 COL11A2P13942 1736 aaPredicted RBP16.55■□□□□ 0.24
SCUBE2-213ENST00000534295 SLX4Q8IY92 1834 aa16.54■□□□□ 0.24
SCUBE2-213ENST00000534295 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
SCUBE2-213ENST00000534295 SNRPA1P09661 255 aaKnown RBP16.54■□□□□ 0.24
SCUBE2-213ENST00000534295 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
SCUBE2-213ENST00000534295 POTEJP0CG39 1038 aa16.54■□□□□ 0.24
SCUBE2-213ENST00000534295 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
SCUBE2-213ENST00000534295 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
SCUBE2-213ENST00000534295 IQCA1LA6NCM1 817 aa16.53■□□□□ 0.24
SCUBE2-213ENST00000534295 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
SCUBE2-213ENST00000534295 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCUBE2-213ENST00000534295 LDHDQ86WU2 507 aa16.53■□□□□ 0.24
SCUBE2-213ENST00000534295 BCORQ6W2J9 1755 aa16.53■□□□□ 0.24
SCUBE2-213ENST00000534295 CNTNAP1P78357 1384 aa16.52■□□□□ 0.24
SCUBE2-213ENST00000534295 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
SCUBE2-213ENST00000534295 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
SCUBE2-213ENST00000534295 TAF1DQ9H5J8 278 aaPredicted RBP16.52■□□□□ 0.24
SCUBE2-213ENST00000534295 NPR1P16066 1061 aa16.51■□□□□ 0.23
SCUBE2-213ENST00000534295 TPTE2Q6XPS3 522 aa16.51■□□□□ 0.23
SCUBE2-213ENST00000534295 MCM10Q7L590 875 aa16.51■□□□□ 0.23
SCUBE2-213ENST00000534295 PRDM10Q9NQV6 1147 aa16.51■□□□□ 0.23
SCUBE2-213ENST00000534295 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
SCUBE2-213ENST00000534295 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
SCUBE2-213ENST00000534295 DLG5Q8TDM6 1919 aa16.51■□□□□ 0.23
SCUBE2-213ENST00000534295 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
SCUBE2-213ENST00000534295 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCUBE2-213ENST00000534295 PRAMEF22A3QJZ6 481 aa16.49■□□□□ 0.23
SCUBE2-213ENST00000534295 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
SCUBE2-213ENST00000534295 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
SCUBE2-213ENST00000534295 FKBP4Q02790 459 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCUBE2-213ENST00000534295 FOXN1O15353 648 aa16.48■□□□□ 0.23
SCUBE2-213ENST00000534295 NEFMP07197 916 aa16.48■□□□□ 0.23
SCUBE2-213ENST00000534295 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
SCUBE2-213ENST00000534295 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
SCUBE2-213ENST00000534295 TMEM88BA6NKF7 163 aa16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 FAM177BA6PVY3 158 aa16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 FZD9O00144 591 aa16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 SCN4AP35499 1836 aa16.47■□□□□ 0.23
SCUBE2-213ENST00000534295 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
SCUBE2-213ENST00000534295 VEGFBP49765 207 aa16.46■□□□□ 0.23
SCUBE2-213ENST00000534295 WDR43Q15061 677 aaKnown RBP eCLIP16.46■□□□□ 0.23
SCUBE2-213ENST00000534295 HACL1Q9UJ83 578 aa16.46■□□□□ 0.23
SCUBE2-213ENST00000534295 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
SCUBE2-213ENST00000534295 MIER1Q8N108 512 aa16.45■□□□□ 0.22
SCUBE2-213ENST00000534295 ZNF277Q9NRM2 450 aaPredicted RBP16.45■□□□□ 0.22
SCUBE2-213ENST00000534295 WBP1LQ9NX94 342 aa16.45■□□□□ 0.22
SCUBE2-213ENST00000534295 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
SCUBE2-213ENST00000534295 RASSF10A6NK89 507 aa16.44■□□□□ 0.22
SCUBE2-213ENST00000534295 EPHX2P34913 555 aa16.44■□□□□ 0.22
SCUBE2-213ENST00000534295 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
SCUBE2-213ENST00000534295 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
SCUBE2-213ENST00000534295 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
SCUBE2-213ENST00000534295 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
SCUBE2-213ENST00000534295 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
SCUBE2-213ENST00000534295 HLFQ16534 295 aa16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 PSMD1Q99460 953 aa16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
SCUBE2-213ENST00000534295 ADAMTSL1Q8N6G6 1762 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms