RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 ELL2O00472 640 aaPredicted RBP12.81□□□□□ -0.36
LDLRAD3-206ENST00000534091 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
LDLRAD3-206ENST00000534091 GYS1P13807 737 aa12.81□□□□□ -0.36
LDLRAD3-206ENST00000534091 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
LDLRAD3-206ENST00000534091 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
LDLRAD3-206ENST00000534091 PTPRCP08575 1304 aa12.81□□□□□ -0.36
LDLRAD3-206ENST00000534091 COL15A1P39059 1388 aa12.81□□□□□ -0.36
LDLRAD3-206ENST00000534091 ZPR1O75312 459 aa12.8□□□□□ -0.36
LDLRAD3-206ENST00000534091 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-206ENST00000534091 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
LDLRAD3-206ENST00000534091 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
LDLRAD3-206ENST00000534091 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-206ENST00000534091 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
LDLRAD3-206ENST00000534091 ABCC4O15439 1325 aa12.8□□□□□ -0.36
LDLRAD3-206ENST00000534091 MMP10P09238 476 aa12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 RLBP1P12271 317 aa12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 MVPQ14764 893 aaKnown RBP12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 PARP3Q9Y6F1 533 aa12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 CHD4Q14839 1912 aa12.79□□□□□ -0.36
LDLRAD3-206ENST00000534091 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
LDLRAD3-206ENST00000534091 TGFB2P61812 414 aa12.78□□□□□ -0.36
LDLRAD3-206ENST00000534091 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
LDLRAD3-206ENST00000534091 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
LDLRAD3-206ENST00000534091 DDX19BQ9UMR2 479 aa12.78□□□□□ -0.36
LDLRAD3-206ENST00000534091 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
LDLRAD3-206ENST00000534091 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
LDLRAD3-206ENST00000534091 KCNQ3O43525 872 aa12.77□□□□□ -0.37
LDLRAD3-206ENST00000534091 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.37
LDLRAD3-206ENST00000534091 TNNQ9UQP3 1299 aa12.77□□□□□ -0.37
LDLRAD3-206ENST00000534091 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
LDLRAD3-206ENST00000534091 TM4SF1P30408 202 aa12.76□□□□□ -0.37
LDLRAD3-206ENST00000534091 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
LDLRAD3-206ENST00000534091 CLUAP1Q96AJ1 413 aa12.76□□□□□ -0.37
LDLRAD3-206ENST00000534091 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-206ENST00000534091 ERBB4Q15303 1308 aa12.76□□□□□ -0.37
LDLRAD3-206ENST00000534091 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
LDLRAD3-206ENST00000534091 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 GPR162Q16538 588 aa12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 CLEC4GQ6UXB4 293 aa12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 SMIM5Q71RC9 77 aa12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
LDLRAD3-206ENST00000534091 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
LDLRAD3-206ENST00000534091 SCN7AQ01118 1682 aa12.74□□□□□ -0.37
LDLRAD3-206ENST00000534091 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
LDLRAD3-206ENST00000534091 NLGN2Q8NFZ4 835 aa12.74□□□□□ -0.37
LDLRAD3-206ENST00000534091 SRP68Q9UHB9 627 aaKnown RBP12.74□□□□□ -0.37
LDLRAD3-206ENST00000534091 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
LDLRAD3-206ENST00000534091 POLRMTO00411 1230 aaKnown RBP12.73□□□□□ -0.37
LDLRAD3-206ENST00000534091 TCERG1O14776 1098 aaKnown RBP12.73□□□□□ -0.37
LDLRAD3-206ENST00000534091 A1BGP04217 495 aa12.73□□□□□ -0.37
LDLRAD3-206ENST00000534091 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
LDLRAD3-206ENST00000534091 ZNF652Q9Y2D9 606 aa12.73□□□□□ -0.37
LDLRAD3-206ENST00000534091 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
LDLRAD3-206ENST00000534091 KDM2BQ8NHM5 1336 aa12.72□□□□□ -0.37
LDLRAD3-206ENST00000534091 FLIIQ13045 1269 aa12.72□□□□□ -0.37
LDLRAD3-206ENST00000534091 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
LDLRAD3-206ENST00000534091 BCL2L12Q9HB09 334 aa12.72□□□□□ -0.37
LDLRAD3-206ENST00000534091 DBF4Q9UBU7 674 aaPredicted RBP12.72□□□□□ -0.37
LDLRAD3-206ENST00000534091 YY1P25490 414 aa12.71□□□□□ -0.37
LDLRAD3-206ENST00000534091 NFIXQ14938 502 aa12.71□□□□□ -0.37
LDLRAD3-206ENST00000534091 G2E3Q7L622 706 aa12.71□□□□□ -0.37
LDLRAD3-206ENST00000534091 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
LDLRAD3-206ENST00000534091 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.37
LDLRAD3-206ENST00000534091 AFDNP55196 1824 aaKnown RBP12.71□□□□□ -0.38
LDLRAD3-206ENST00000534091 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.38
LDLRAD3-206ENST00000534091 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 BRCA1P38398 1863 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 ERVV-1B6SEH8 477 aa12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 CAMTA2O94983 1202 aa12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 DDR1Q08345 913 aa12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 DDX21Q9NR30 783 aaKnown RBP eCLIP12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
LDLRAD3-206ENST00000534091 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-206ENST00000534091 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-206ENST00000534091 SERPINB2P05120 415 aa12.69□□□□□ -0.38
LDLRAD3-206ENST00000534091 EIF2S2P20042 333 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-206ENST00000534091 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-206ENST00000534091 HYPKQ9NX55 129 aa12.69□□□□□ -0.38
LDLRAD3-206ENST00000534091 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
LDLRAD3-206ENST00000534091 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 SETDB2Q96T68 719 aa12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 ARFGEF2Q9Y6D5 1785 aa12.68□□□□□ -0.38
LDLRAD3-206ENST00000534091 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
LDLRAD3-206ENST00000534091 YBX3P16989 372 aaKnown RBP eCLIP12.67□□□□□ -0.38
LDLRAD3-206ENST00000534091 HDAC1Q13547 482 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-206ENST00000534091 PDIA6Q15084 440 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms