RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
CAPN1-227ENST00000533909 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-227ENST00000533909 RGL2O15211 777 aa17.31■□□□□ 0.36
CAPN1-227ENST00000533909 DPEP1P16444 411 aa17.31■□□□□ 0.36
CAPN1-227ENST00000533909 ST5P78524 1137 aa17.31■□□□□ 0.36
CAPN1-227ENST00000533909 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
CAPN1-227ENST00000533909 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
CAPN1-227ENST00000533909 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
CAPN1-227ENST00000533909 ERVV-1B6SEH8 477 aa17.3■□□□□ 0.36
CAPN1-227ENST00000533909 ANXA1P04083 346 aa17.3■□□□□ 0.36
CAPN1-227ENST00000533909 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-227ENST00000533909 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
CAPN1-227ENST00000533909 TTLL7Q6ZT98 887 aa17.3■□□□□ 0.36
CAPN1-227ENST00000533909 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
CAPN1-227ENST00000533909 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
CAPN1-227ENST00000533909 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
CAPN1-227ENST00000533909 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-227ENST00000533909 KIF13BQ9NQT8 1826 aa17.29■□□□□ 0.36
CAPN1-227ENST00000533909 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
CAPN1-227ENST00000533909 YBX3P16989 372 aaKnown RBP eCLIP17.29■□□□□ 0.363e-6■□□□□ 8.1
CAPN1-227ENST00000533909 WDR63Q8IWG1 891 aa17.29■□□□□ 0.36
CAPN1-227ENST00000533909 BCS1LQ9Y276 419 aa17.29■□□□□ 0.36
CAPN1-227ENST00000533909 YY1P25490 414 aa17.28■□□□□ 0.36
CAPN1-227ENST00000533909 PDIA6Q15084 440 aa17.28■□□□□ 0.36
CAPN1-227ENST00000533909 HLFQ16534 295 aa17.28■□□□□ 0.36
CAPN1-227ENST00000533909 PROSER3Q2NL68 480 aa17.28■□□□□ 0.36
CAPN1-227ENST00000533909 XAGE3Q8WTP9 111 aa17.28■□□□□ 0.36
CAPN1-227ENST00000533909 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
CAPN1-227ENST00000533909 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
CAPN1-227ENST00000533909 AFDNP55196 1824 aaKnown RBP17.27■□□□□ 0.36
CAPN1-227ENST00000533909 H0YIN7 160 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 CHRNA5P30532 468 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 PDE6BP35913 854 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 COPS6Q7L5N1 327 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
CAPN1-227ENST00000533909 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-227ENST00000533909 GPTP24298 496 aa17.26■□□□□ 0.35
CAPN1-227ENST00000533909 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
CAPN1-227ENST00000533909 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
CAPN1-227ENST00000533909 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
CAPN1-227ENST00000533909 C8orf58Q8NAV2 365 aa17.26■□□□□ 0.35
CAPN1-227ENST00000533909 BRIP1Q9BX63 1249 aa17.26■□□□□ 0.35
CAPN1-227ENST00000533909 PDZRN3Q9UPQ7 1066 aa17.26■□□□□ 0.35
CAPN1-227ENST00000533909 HSP90AB3PQ58FF7 597 aa17.25■□□□□ 0.35
CAPN1-227ENST00000533909 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
CAPN1-227ENST00000533909 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
CAPN1-227ENST00000533909 NYXQ9GZU5 481 aa17.25■□□□□ 0.35
CAPN1-227ENST00000533909 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
CAPN1-227ENST00000533909 ATP10DQ9P241 1426 aa17.24■□□□□ 0.35
CAPN1-227ENST00000533909 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
CAPN1-227ENST00000533909 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
CAPN1-227ENST00000533909 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
CAPN1-227ENST00000533909 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-227ENST00000533909 PARP10Q53GL7 1025 aa17.23■□□□□ 0.35
CAPN1-227ENST00000533909 LRP10Q7Z4F1 713 aa17.23■□□□□ 0.35
CAPN1-227ENST00000533909 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.35
CAPN1-227ENST00000533909 KCNA3P22001 575 aa17.22■□□□□ 0.35
CAPN1-227ENST00000533909 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
CAPN1-227ENST00000533909 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 ARHGAP27Q6ZUM4 889 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 MIER1Q8N108 512 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 TSPYL6Q8N831 410 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 PLBD2Q8NHP8 589 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 NUP98P52948 1817 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
CAPN1-227ENST00000533909 UTRNP46939 3433 aa17.21■□□□□ 0.34
CAPN1-227ENST00000533909 DDX58O95786 925 aaKnown RBP17.2■□□□□ 0.34
CAPN1-227ENST00000533909 RIC3Q7Z5B4 369 aa17.2■□□□□ 0.34
CAPN1-227ENST00000533909 ZNF34Q8IZ26 560 aa17.2■□□□□ 0.34
CAPN1-227ENST00000533909 EXOSC9Q06265 439 aaKnown RBP17.19■□□□□ 0.34
CAPN1-227ENST00000533909 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
CAPN1-227ENST00000533909 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
CAPN1-227ENST00000533909 CHD4Q14839 1912 aa17.19■□□□□ 0.34
CAPN1-227ENST00000533909 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
CAPN1-227ENST00000533909 IBTKQ9P2D0 1353 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-227ENST00000533909 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
CAPN1-227ENST00000533909 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
CAPN1-227ENST00000533909 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
CAPN1-227ENST00000533909 SUSD4Q5VX71 490 aa17.18■□□□□ 0.34
CAPN1-227ENST00000533909 STYK1Q6J9G0 422 aa17.17■□□□□ 0.34
CAPN1-227ENST00000533909 CNKSR1Q969H4 720 aa17.17■□□□□ 0.34
CAPN1-227ENST00000533909 MASTLQ96GX5 879 aa17.17■□□□□ 0.34
CAPN1-227ENST00000533909 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
CAPN1-227ENST00000533909 E9PSI1 815 aa17.16■□□□□ 0.34
CAPN1-227ENST00000533909 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
CAPN1-227ENST00000533909 SRGNP10124 158 aa17.16■□□□□ 0.34
CAPN1-227ENST00000533909 NPR1P16066 1061 aa17.16■□□□□ 0.34
CAPN1-227ENST00000533909 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
CAPN1-227ENST00000533909 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-227ENST00000533909 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-227ENST00000533909 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
CAPN1-227ENST00000533909 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
CAPN1-227ENST00000533909 ANKRD31Q8N7Z5 1873 aa17.16■□□□□ 0.34
CAPN1-227ENST00000533909 NTSR2O95665 410 aa17.15■□□□□ 0.34
CAPN1-227ENST00000533909 NLRP10Q86W26 655 aa17.15■□□□□ 0.34
CAPN1-227ENST00000533909 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms