RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 POLA2Q14181 598 aa23.21■■□□□ 1.31
CAPN1-226ENST00000533820 NECAB1Q8N987 351 aa23.21■■□□□ 1.31
CAPN1-226ENST00000533820 VPS37CA5D8V6 355 aaPredicted RBP23.21■■□□□ 1.31
CAPN1-226ENST00000533820 ZSCAN22P10073 491 aaPredicted RBP23.21■■□□□ 1.31
CAPN1-226ENST00000533820 EIF4A1P60842 406 aaKnown RBP23.21■■□□□ 1.31
CAPN1-226ENST00000533820 DMTNQ08495 405 aa23.21■■□□□ 1.31
CAPN1-226ENST00000533820 TEFQ10587 303 aa23.21■■□□□ 1.31
CAPN1-226ENST00000533820 MAPK8IP2Q13387 824 aaPredicted RBP23.21■■□□□ 1.31
CAPN1-226ENST00000533820 C9orf78Q9NZ63 289 aaPredicted RBP23.21■■□□□ 1.31
CAPN1-226ENST00000533820 LIMCH1Q9UPQ0 1083 aa23.21■■□□□ 1.31
CAPN1-226ENST00000533820 CWF19L2Q2TBE0 894 aaKnown RBP23.2■■□□□ 1.3
CAPN1-226ENST00000533820 BEND3Q5T5X7 828 aa23.2■■□□□ 1.3
CAPN1-226ENST00000533820 TCEANC2Q96MN5 208 aa23.2■■□□□ 1.3
CAPN1-226ENST00000533820 NALCNQ8IZF0 1738 aa23.2■■□□□ 1.3
CAPN1-226ENST00000533820 PRAMEF22A3QJZ6 481 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 KCNJ4P48050 445 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 GIMAP6Q6P9H5 292 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 JARID2Q92833 1246 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-226ENST00000533820 UBR1Q8IWV7 1749 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 TTC14Q96N46 770 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 TTC12Q9H892 705 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-226ENST00000533820 TMEM51Q9NW97 253 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 PHF14O94880 888 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 DNM1Q05193 864 aaKnown RBP23.19■■□□□ 1.3
CAPN1-226ENST00000533820 COL9A3Q14050 684 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-226ENST00000533820 PROSER3Q2NL68 480 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
CAPN1-226ENST00000533820 BTBD11A6QL63 1104 aa23.18■■□□□ 1.3
CAPN1-226ENST00000533820 AIMP1Q12904 312 aaKnown RBP23.18■■□□□ 1.3
CAPN1-226ENST00000533820 LMOD2Q6P5Q4 547 aa23.18■■□□□ 1.3
CAPN1-226ENST00000533820 XRN1Q8IZH2 1706 aaKnown RBP23.18■■□□□ 1.3
CAPN1-226ENST00000533820 GJB2P29033 226 aa23.18■■□□□ 1.3
CAPN1-226ENST00000533820 FERMT3Q86UX7 667 aa23.18■■□□□ 1.3
CAPN1-226ENST00000533820 CLASRPQ8N2M8 674 aaKnown RBP23.18■■□□□ 1.3
CAPN1-226ENST00000533820 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
CAPN1-226ENST00000533820 SIL1Q9H173 461 aa23.17■■□□□ 1.3
CAPN1-226ENST00000533820 AOX1Q06278 1338 aa23.17■■□□□ 1.3
CAPN1-226ENST00000533820 FAM173BQ6P4H8 233 aa23.17■■□□□ 1.3
CAPN1-226ENST00000533820 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
CAPN1-226ENST00000533820 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
CAPN1-226ENST00000533820 PDRG1Q9NUG6 133 aa23.16■■□□□ 1.3
CAPN1-226ENST00000533820 FAM208AQ9UK61 1670 aaKnown RBP23.16■■□□□ 1.3
CAPN1-226ENST00000533820 ADCY5O95622 1261 aa23.16■■□□□ 1.3
CAPN1-226ENST00000533820 F13A1P00488 732 aa23.16■■□□□ 1.3
CAPN1-226ENST00000533820 AACSQ86V21 672 aa23.16■■□□□ 1.3
CAPN1-226ENST00000533820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-226ENST00000533820 CCDC183Q5T5S1 534 aa23.15■■□□□ 1.3
CAPN1-226ENST00000533820 TSC1Q92574 1164 aa23.15■■□□□ 1.3
CAPN1-226ENST00000533820 CCDC8Q9H0W5 538 aaPredicted RBP23.15■■□□□ 1.3
CAPN1-226ENST00000533820 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.15■■□□□ 1.3
CAPN1-226ENST00000533820 GLRX3O76003 335 aaKnown RBP23.14■■□□□ 1.3
CAPN1-226ENST00000533820 ZSCAN20P17040 1043 aaPredicted RBP23.14■■□□□ 1.3
CAPN1-226ENST00000533820 FAM227BQ96M60 508 aa23.14■■□□□ 1.3
CAPN1-226ENST00000533820 TBX22Q9Y458 520 aa23.14■■□□□ 1.3
CAPN1-226ENST00000533820 PIK3C2AO00443 1686 aa23.14■■□□□ 1.3
CAPN1-226ENST00000533820 HYPKQ9NX55 129 aa23.14■■□□□ 1.29
CAPN1-226ENST00000533820 KIAA2012Q0VF49 1180 aa23.14■■□□□ 1.29
CAPN1-226ENST00000533820 ZBTB22O15209 634 aa23.13■■□□□ 1.29
CAPN1-226ENST00000533820 TUBGCP6Q96RT7 1819 aa23.13■■□□□ 1.29
CAPN1-226ENST00000533820 KLHL34Q8N239 644 aa23.13■■□□□ 1.29
CAPN1-226ENST00000533820 KLHDC4Q8TBB5 520 aa23.13■■□□□ 1.29
CAPN1-226ENST00000533820 CSPP1Q1MSJ5 1256 aa23.12■■□□□ 1.29
CAPN1-226ENST00000533820 DIP2AQ14689 1571 aa23.12■■□□□ 1.29
CAPN1-226ENST00000533820 ECHDC1Q9NTX5 307 aa23.12■■□□□ 1.29
CAPN1-226ENST00000533820 UBE2HP62256 183 aa23.12■■□□□ 1.29
CAPN1-226ENST00000533820 ADCY9O60503 1353 aa23.11■■□□□ 1.29
CAPN1-226ENST00000533820 CYP46A1Q9Y6A2 500 aa23.11■■□□□ 1.29
CAPN1-226ENST00000533820 FAM177BA6PVY3 158 aa23.11■■□□□ 1.29
CAPN1-226ENST00000533820 ME3Q16798 604 aa23.11■■□□□ 1.29
CAPN1-226ENST00000533820 UTP14CQ5TAP6 766 aaKnown RBP23.11■■□□□ 1.29
CAPN1-226ENST00000533820 HSP90AB4PQ58FF6 505 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 MCM5P33992 734 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 CAMK4Q16566 473 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 SPC24Q8NBT2 197 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 RUFY2Q8WXA3 655 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 BOLA2Q9H3K6 86 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 STK3Q13188 491 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 TLR7Q9NYK1 1049 aaKnown RBP23.1■■□□□ 1.29
CAPN1-226ENST00000533820 PHF8Q9UPP1 1060 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 MTMR6Q9Y217 621 aa23.1■■□□□ 1.29
CAPN1-226ENST00000533820 NWD1Q149M9 1564 aa23.09■■□□□ 1.29
CAPN1-226ENST00000533820 RBM8AQ9Y5S9 174 aaKnown RBP23.09■■□□□ 1.29
CAPN1-226ENST00000533820 TAF6LQ9Y6J9 622 aa23.09■■□□□ 1.29
CAPN1-226ENST00000533820 PSME1Q06323 249 aa23.08■■□□□ 1.29
CAPN1-226ENST00000533820 ESCO1Q5FWF5 840 aa23.08■■□□□ 1.29
CAPN1-226ENST00000533820 CBX1P83916 185 aa23.08■■□□□ 1.29
CAPN1-226ENST00000533820 ST3GAL1Q11201 340 aa23.08■■□□□ 1.29
CAPN1-226ENST00000533820 IL17RAQ96F46 866 aa23.08■■□□□ 1.29
CAPN1-226ENST00000533820 CCDC9Q9Y3X0 531 aaKnown RBP23.08■■□□□ 1.29
CAPN1-226ENST00000533820 NMIQ13287 307 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-226ENST00000533820 IP6K1Q92551 441 aa23.07■■□□□ 1.28
CAPN1-226ENST00000533820 EDC3Q96F86 508 aaKnown RBP23.07■■□□□ 1.28
CAPN1-226ENST00000533820 DBF4Q9UBU7 674 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-226ENST00000533820 TPCN1Q9ULQ1 816 aa23.07■■□□□ 1.28
CAPN1-226ENST00000533820 ZKSCAN1P17029 563 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-226ENST00000533820 LARP1BQ659C4 914 aaKnown RBP23.07■■□□□ 1.28
CAPN1-226ENST00000533820 SASS6Q6UVJ0 657 aa23.07■■□□□ 1.28
CAPN1-226ENST00000533820 BABAM1Q9NWV8 329 aa23.07■■□□□ 1.28
CAPN1-226ENST00000533820 ATP6V1DQ9Y5K8 247 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms