RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 MYBBP1AQ9BQG0 1328 aaKnown RBP24.35■■□□□ 1.49
HIF3A-216ENST00000533789 RGL2O15211 777 aa24.34■■□□□ 1.49
HIF3A-216ENST00000533789 RASSF7Q02833 373 aa24.34■■□□□ 1.49
HIF3A-216ENST00000533789 THUMPD2Q9BTF0 503 aaKnown RBP24.34■■□□□ 1.49
HIF3A-216ENST00000533789 NPHP1O15259 732 aa24.33■■□□□ 1.49
HIF3A-216ENST00000533789 ST5P78524 1137 aa24.33■■□□□ 1.49
HIF3A-216ENST00000533789 CCDC24Q8N4L8 307 aa24.33■■□□□ 1.49
HIF3A-216ENST00000533789 EIF4A1P60842 406 aaKnown RBP24.32■■□□□ 1.48
HIF3A-216ENST00000533789 NMRK2Q9NPI5 230 aa24.32■■□□□ 1.48
HIF3A-216ENST00000533789 ZC3H4Q9UPT8 1303 aaKnown RBP24.32■■□□□ 1.48
HIF3A-216ENST00000533789 WDR90Q96KV7 1748 aa24.31■■□□□ 1.48
HIF3A-216ENST00000533789 HSPA6P17066 643 aa24.3■■□□□ 1.48
HIF3A-216ENST00000533789 ZNF622Q969S3 477 aaKnown RBP eCLIP24.3■■□□□ 1.48
HIF3A-216ENST00000533789 KDM2BQ8NHM5 1336 aa24.3■■□□□ 1.48
HIF3A-216ENST00000533789 LMNB1P20700 586 aa24.29■■□□□ 1.48
HIF3A-216ENST00000533789 NBPF5PQ86XG9 351 aaPredicted RBP24.29■■□□□ 1.48
HIF3A-216ENST00000533789 TOMM70O94826 608 aa24.28■■□□□ 1.48
HIF3A-216ENST00000533789 NFKBIEO00221 500 aa24.27■■□□□ 1.48
HIF3A-216ENST00000533789 PRELPP51888 382 aa24.27■■□□□ 1.48
HIF3A-216ENST00000533789 RIPK4P57078 832 aa24.27■■□□□ 1.48
HIF3A-216ENST00000533789 STYK1Q6J9G0 422 aa24.27■■□□□ 1.48
HIF3A-216ENST00000533789 NIP7Q9Y221 180 aaKnown RBP eCLIP24.27■■□□□ 1.48
HIF3A-216ENST00000533789 SRGNP10124 158 aa24.26■■□□□ 1.47
HIF3A-216ENST00000533789 TMPOP42166 694 aaKnown RBP24.25■■□□□ 1.47
HIF3A-216ENST00000533789 LMOD3Q0VAK6 560 aa24.25■■□□□ 1.47
HIF3A-216ENST00000533789 CNKSR1Q969H4 720 aa24.25■■□□□ 1.47
HIF3A-216ENST00000533789 MASTLQ96GX5 879 aa24.25■■□□□ 1.47
HIF3A-216ENST00000533789 TSPYL4Q9UJ04 414 aa24.25■■□□□ 1.47
HIF3A-216ENST00000533789 LAMB2P55268 1798 aa24.24■■□□□ 1.47
HIF3A-216ENST00000533789 C21orf2O43822 256 aa24.24■■□□□ 1.47
HIF3A-216ENST00000533789 HLFQ16534 295 aa24.24■■□□□ 1.47
HIF3A-216ENST00000533789 ERBB4Q15303 1308 aa24.24■■□□□ 1.47
HIF3A-216ENST00000533789 PRPF40BQ6NWY9 871 aaKnown RBP24.23■■□□□ 1.47
HIF3A-216ENST00000533789 TPTE2Q6XPS3 522 aa24.23■■□□□ 1.47
HIF3A-216ENST00000533789 MAP3K15Q6ZN16 1313 aa24.23■■□□□ 1.47
HIF3A-216ENST00000533789 LTBP3Q9NS15 1303 aa24.22■■□□□ 1.47
HIF3A-216ENST00000533789 ERVV-1B6SEH8 477 aa24.22■■□□□ 1.47
HIF3A-216ENST00000533789 BABAM1Q9NWV8 329 aa24.22■■□□□ 1.47
HIF3A-216ENST00000533789 ZNF219Q9P2Y4 722 aaPredicted RBP24.22■■□□□ 1.47
HIF3A-216ENST00000533789 RRP7AQ9Y3A4 280 aaKnown RBP24.22■■□□□ 1.47
HIF3A-216ENST00000533789 KIF6Q6ZMV9 814 aa24.21■■□□□ 1.47
HIF3A-216ENST00000533789 C16orf71Q8IYS4 520 aaPredicted RBP24.21■■□□□ 1.47
HIF3A-216ENST00000533789 NGEFQ8N5V2 710 aa24.21■■□□□ 1.47
HIF3A-216ENST00000533789 RBM46Q8TBY0 533 aaKnown RBP24.21■■□□□ 1.47
HIF3A-216ENST00000533789 IBTKQ9P2D0 1353 aaPredicted RBP24.2■■□□□ 1.46
HIF3A-216ENST00000533789 KLRG2A4D1S0 409 aaPredicted RBP24.2■■□□□ 1.46
HIF3A-216ENST00000533789 MYL6BP14649 208 aa24.2■■□□□ 1.46
HIF3A-216ENST00000533789 WDR43Q15061 677 aaKnown RBP eCLIP24.2■■□□□ 1.46
HIF3A-216ENST00000533789 CCDC146Q8IYE0 955 aa24.2■■□□□ 1.46
HIF3A-216ENST00000533789 RIC1Q4ADV7 1423 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 FAM177BA6PVY3 158 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 NPR1P16066 1061 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 SOGA3Q5TF21 947 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 TTLL7Q6ZT98 887 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 TAOK3Q9H2K8 898 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 RRAGCQ9HB90 399 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 SCN4AP35499 1836 aa24.19■■□□□ 1.46
HIF3A-216ENST00000533789 GLTPD2A6NH11 291 aa24.18■■□□□ 1.46
HIF3A-216ENST00000533789 RUNDC1Q96C34 613 aa24.18■■□□□ 1.46
HIF3A-216ENST00000533789 ABCC12Q96J65 1359 aa24.17■■□□□ 1.46
HIF3A-216ENST00000533789 NYXQ9GZU5 481 aa24.17■■□□□ 1.46
HIF3A-216ENST00000533789 PRKRIP1Q9H875 184 aaPredicted RBP24.17■■□□□ 1.46
HIF3A-216ENST00000533789 APLP1P51693 650 aa24.16■■□□□ 1.46
HIF3A-216ENST00000533789 NEUROD2Q15784 382 aa24.16■■□□□ 1.46
HIF3A-216ENST00000533789 ZBTB3Q9H5J0 574 aa24.16■■□□□ 1.46
HIF3A-216ENST00000533789 UBN2Q6ZU65 1347 aa24.15■■□□□ 1.46
HIF3A-216ENST00000533789 GTF2E1P29083 439 aaPredicted RBP24.15■■□□□ 1.46
HIF3A-216ENST00000533789 FSTL1Q12841 308 aa24.14■■□□□ 1.45
HIF3A-216ENST00000533789 ERFEQ4G0M1 354 aa24.14■■□□□ 1.45
HIF3A-216ENST00000533789 LRP10Q7Z4F1 713 aa24.14■■□□□ 1.45
HIF3A-216ENST00000533789 C7orf43Q8WVR3 580 aa24.14■■□□□ 1.45
HIF3A-216ENST00000533789 EIF2S2P20042 333 aaKnown RBP24.13■■□□□ 1.45
HIF3A-216ENST00000533789 PDIA6Q15084 440 aa24.13■■□□□ 1.45
HIF3A-216ENST00000533789 CCDC93Q567U6 631 aa24.13■■□□□ 1.45
HIF3A-216ENST00000533789 GIGYF2Q6Y7W6 1299 aaKnown RBP24.13■■□□□ 1.45
HIF3A-216ENST00000533789 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
HIF3A-216ENST00000533789 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
HIF3A-216ENST00000533789 GPTP24298 496 aa24.12■■□□□ 1.45
HIF3A-216ENST00000533789 CRY2Q49AN0 593 aa24.12■■□□□ 1.45
HIF3A-216ENST00000533789 NUTM1Q86Y26 1132 aa24.12■■□□□ 1.45
HIF3A-216ENST00000533789 DDX60Q8IY21 1712 aaKnown RBP24.11■■□□□ 1.45
HIF3A-216ENST00000533789 CHL1O00533 1208 aa24.11■■□□□ 1.45
HIF3A-216ENST00000533789 VEGFAP15692 232 aaPredicted RBP24.11■■□□□ 1.45
HIF3A-216ENST00000533789 DPY19L2Q6NUT2 758 aa24.11■■□□□ 1.45
HIF3A-216ENST00000533789 ZNF34Q8IZ26 560 aa24.11■■□□□ 1.45
HIF3A-216ENST00000533789 ALDH1B1P30837 517 aa24.1■■□□□ 1.45
HIF3A-216ENST00000533789 PROSER3Q2NL68 480 aa24.1■■□□□ 1.45
HIF3A-216ENST00000533789 TAF1P21675 1872 aa24.1■■□□□ 1.45
HIF3A-216ENST00000533789 SNED1Q8TER0 1413 aa24.1■■□□□ 1.45
HIF3A-216ENST00000533789 NTSR2O95665 410 aa24.09■■□□□ 1.45
HIF3A-216ENST00000533789 SUSD4Q5VX71 490 aa24.09■■□□□ 1.45
HIF3A-216ENST00000533789 SMC1BQ8NDV3 1235 aa24.09■■□□□ 1.45
HIF3A-216ENST00000533789 ANXA1P04083 346 aa24.08■■□□□ 1.45
HIF3A-216ENST00000533789 PARP10Q53GL7 1025 aa24.08■■□□□ 1.45
HIF3A-216ENST00000533789 FKBP4Q02790 459 aaKnown RBP eCLIP24.07■■□□□ 1.44
HIF3A-216ENST00000533789 LAS1LQ9Y4W2 734 aaKnown RBP24.07■■□□□ 1.44
HIF3A-216ENST00000533789 KRT24Q2M2I5 525 aa24.06■■□□□ 1.44
HIF3A-216ENST00000533789 OLFM4Q6UX06 510 aa24.06■■□□□ 1.44
HIF3A-216ENST00000533789 PPP1R42Q7Z4L9 355 aa24.06■■□□□ 1.44
HIF3A-216ENST00000533789 RTKN2Q8IZC4 609 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms