RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
SVIP-205ENST00000533774 VSIG10Q8N0Z9 540 aa16.87■□□□□ 0.29
SVIP-205ENST00000533774 THSD7BQ9C0I4 1608 aa16.87■□□□□ 0.29
SVIP-205ENST00000533774 TRPM7Q96QT4 1865 aa16.86■□□□□ 0.29
SVIP-205ENST00000533774 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
SVIP-205ENST00000533774 EAPPQ56P03 285 aaPredicted RBP16.86■□□□□ 0.29
SVIP-205ENST00000533774 C7orf43Q8WVR3 580 aa16.86■□□□□ 0.29
SVIP-205ENST00000533774 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
SVIP-205ENST00000533774 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
SVIP-205ENST00000533774 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
SVIP-205ENST00000533774 SRGNP10124 158 aa16.85■□□□□ 0.29
SVIP-205ENST00000533774 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
SVIP-205ENST00000533774 PANK3Q9H999 370 aa16.85■□□□□ 0.29
SVIP-205ENST00000533774 TNRC18O15417 2968 aaPredicted RBP16.85■□□□□ 0.29
SVIP-205ENST00000533774 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
SVIP-205ENST00000533774 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
SVIP-205ENST00000533774 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
SVIP-205ENST00000533774 OLFM4Q6UX06 510 aa16.84■□□□□ 0.29
SVIP-205ENST00000533774 CNKSR1Q969H4 720 aa16.84■□□□□ 0.29
SVIP-205ENST00000533774 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
SVIP-205ENST00000533774 A0A087WZG4 1122 aa16.83■□□□□ 0.28
SVIP-205ENST00000533774 RGS19P49795 217 aa16.83■□□□□ 0.28
SVIP-205ENST00000533774 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.28
SVIP-205ENST00000533774 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
SVIP-205ENST00000533774 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 HMOX1P09601 288 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 EPHX2P34913 555 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 MASTLQ96GX5 879 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
SVIP-205ENST00000533774 ZNF277Q9NRM2 450 aaPredicted RBP16.82■□□□□ 0.28
SVIP-205ENST00000533774 HACL1Q9UJ83 578 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
SVIP-205ENST00000533774 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
SVIP-205ENST00000533774 CCDC85CA6NKD9 419 aa16.81■□□□□ 0.28
SVIP-205ENST00000533774 STARD3NLO95772 234 aa16.81■□□□□ 0.28
SVIP-205ENST00000533774 MLLT1Q03111 559 aaPredicted RBP16.81■□□□□ 0.28
SVIP-205ENST00000533774 CNBD1Q8NA66 436 aa16.81■□□□□ 0.28
SVIP-205ENST00000533774 ZNF330Q9Y3S2 320 aaPredicted RBP16.81■□□□□ 0.28
SVIP-205ENST00000533774 A1BGP04217 495 aa16.8■□□□□ 0.28
SVIP-205ENST00000533774 COL4A5P29400 1685 aa16.8■□□□□ 0.28
SVIP-205ENST00000533774 HEG1Q9ULI3 1381 aa16.79■□□□□ 0.28
SVIP-205ENST00000533774 PDE4DIPQ5VU43 2346 aa16.79■□□□□ 0.28
SVIP-205ENST00000533774 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
SVIP-205ENST00000533774 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
SVIP-205ENST00000533774 SETDB2Q96T68 719 aa16.79■□□□□ 0.28
SVIP-205ENST00000533774 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
SVIP-205ENST00000533774 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
SVIP-205ENST00000533774 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
SVIP-205ENST00000533774 FKBP4Q02790 459 aaKnown RBP eCLIP16.78■□□□□ 0.28
SVIP-205ENST00000533774 CCDC93Q567U6 631 aa16.78■□□□□ 0.28
SVIP-205ENST00000533774 ABT1Q9ULW3 272 aaKnown RBP16.78■□□□□ 0.28
SVIP-205ENST00000533774 FZD9O00144 591 aa16.77■□□□□ 0.28
SVIP-205ENST00000533774 ST5P78524 1137 aa16.77■□□□□ 0.28
SVIP-205ENST00000533774 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
SVIP-205ENST00000533774 TSKSQ9UJT2 592 aa16.77■□□□□ 0.28
SVIP-205ENST00000533774 PIP4K2AP48426 406 aaPredicted RBP16.76■□□□□ 0.27
SVIP-205ENST00000533774 ZNF790Q6PG37 636 aa16.76■□□□□ 0.27
SVIP-205ENST00000533774 TTC5Q8N0Z6 440 aa16.76■□□□□ 0.27
SVIP-205ENST00000533774 CAPNS2Q96L46 248 aa16.76■□□□□ 0.27
SVIP-205ENST00000533774 SNED1Q8TER0 1413 aa16.76■□□□□ 0.27
SVIP-205ENST00000533774 KLRG2A4D1S0 409 aaPredicted RBP16.75■□□□□ 0.27
SVIP-205ENST00000533774 KCNQ3O43525 872 aa16.75■□□□□ 0.27
SVIP-205ENST00000533774 CYP4F22Q6NT55 531 aa16.75■□□□□ 0.27
SVIP-205ENST00000533774 PNMA8AQ86V59 439 aaPredicted RBP16.75■□□□□ 0.27
SVIP-205ENST00000533774 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
SVIP-205ENST00000533774 NPHP1O15259 732 aa16.74■□□□□ 0.27
SVIP-205ENST00000533774 NPR1P16066 1061 aa16.74■□□□□ 0.27
SVIP-205ENST00000533774 IARSP41252 1262 aaKnown RBP16.74■□□□□ 0.27
SVIP-205ENST00000533774 SYNE4Q8N205 404 aa16.74■□□□□ 0.27
SVIP-205ENST00000533774 AOC2O75106 756 aa16.73■□□□□ 0.27
SVIP-205ENST00000533774 CST9Q5W186 159 aa16.73■□□□□ 0.27
SVIP-205ENST00000533774 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
SVIP-205ENST00000533774 TRAF5O00463 557 aa16.72■□□□□ 0.27
SVIP-205ENST00000533774 GRM1Q13255 1194 aa16.72■□□□□ 0.27
SVIP-205ENST00000533774 SLC51AQ86UW1 340 aa16.72■□□□□ 0.27
SVIP-205ENST00000533774 NBPF5PQ86XG9 351 aaPredicted RBP16.72■□□□□ 0.27
SVIP-205ENST00000533774 GPC2Q8N158 579 aa16.72■□□□□ 0.27
SVIP-205ENST00000533774 GPR101Q96P66 508 aaPredicted RBP16.72■□□□□ 0.27
SVIP-205ENST00000533774 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
SVIP-205ENST00000533774 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
SVIP-205ENST00000533774 EPS15P42566 896 aa16.71■□□□□ 0.27
SVIP-205ENST00000533774 PAXIP1Q6ZW49 1069 aaPredicted RBP16.71■□□□□ 0.27
SVIP-205ENST00000533774 MCOLN1Q9GZU1 580 aa16.71■□□□□ 0.27
SVIP-205ENST00000533774 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
SVIP-205ENST00000533774 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
SVIP-205ENST00000533774 RTKN2Q8IZC4 609 aa16.7■□□□□ 0.26
SVIP-205ENST00000533774 NUP98P52948 1817 aa16.7■□□□□ 0.26
SVIP-205ENST00000533774 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
SVIP-205ENST00000533774 SCNN1DP51172 638 aa16.69■□□□□ 0.26
SVIP-205ENST00000533774 TEFQ10587 303 aa16.69■□□□□ 0.26
SVIP-205ENST00000533774 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
SVIP-205ENST00000533774 GJA3Q9Y6H8 435 aa16.69■□□□□ 0.26
SVIP-205ENST00000533774 TLL2Q9Y6L7 1015 aa16.69■□□□□ 0.26
SVIP-205ENST00000533774 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
SVIP-205ENST00000533774 ECE1P42892 770 aa16.68■□□□□ 0.26
SVIP-205ENST00000533774 CLEC4GQ6UXB4 293 aa16.68■□□□□ 0.26
SVIP-205ENST00000533774 BEGAINQ9BUH8 593 aa16.68■□□□□ 0.26
SVIP-205ENST00000533774 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms