RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 SRPK2P78362 688 aaKnown RBP10.66□□□□□ -0.7
CASP4-212ENST00000533730 NUDT16Q96DE0 195 aaKnown RBP10.66□□□□□ -0.7
CASP4-212ENST00000533730 SLC6A16Q9GZN6 736 aa10.66□□□□□ -0.7
CASP4-212ENST00000533730 ATP7BP35670 1465 aa10.66□□□□□ -0.7
CASP4-212ENST00000533730 USP32Q8NFA0 1604 aa10.66□□□□□ -0.7
CASP4-212ENST00000533730 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.7
CASP4-212ENST00000533730 MMP16P51512 607 aa10.65□□□□□ -0.7
CASP4-212ENST00000533730 PRR7Q8TB68 274 aa10.65□□□□□ -0.7
CASP4-212ENST00000533730 PRDM9Q9NQV7 894 aa10.65□□□□□ -0.7
CASP4-212ENST00000533730 ATAD2Q6PL18 1390 aa10.65□□□□□ -0.71
CASP4-212ENST00000533730 PRR36Q9H6K5 1346 aa10.64□□□□□ -0.71
CASP4-212ENST00000533730 FOXO3O43524 673 aa10.64□□□□□ -0.71
CASP4-212ENST00000533730 S1PR4O95977 384 aa10.64□□□□□ -0.71
CASP4-212ENST00000533730 PSME1Q06323 249 aa10.64□□□□□ -0.71
CASP4-212ENST00000533730 DESI1Q6ICB0 168 aa10.64□□□□□ -0.71
CASP4-212ENST00000533730 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
CASP4-212ENST00000533730 PUS7Q96PZ0 661 aaKnown RBP10.64□□□□□ -0.71
CASP4-212ENST00000533730 SPATA31A6Q5VVP1 1343 aa10.63□□□□□ -0.71
CASP4-212ENST00000533730 RGPD8O14715 1765 aaPredicted RBP10.63□□□□□ -0.71
CASP4-212ENST00000533730 ST20-MTHFSA0A0A6YYL1 179 aa10.63□□□□□ -0.71
CASP4-212ENST00000533730 A0A0G2JS52 829 aa10.63□□□□□ -0.71
CASP4-212ENST00000533730 DXOO77932 396 aaKnown RBP10.63□□□□□ -0.71
CASP4-212ENST00000533730 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
CASP4-212ENST00000533730 PPP1R12CQ9BZL4 782 aa10.63□□□□□ -0.71
CASP4-212ENST00000533730 HMX1Q9NP08 348 aaPredicted RBP10.63□□□□□ -0.71
CASP4-212ENST00000533730 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
CASP4-212ENST00000533730 PXDNQ92626 1479 aa10.62□□□□□ -0.71
CASP4-212ENST00000533730 GPR37L1O60883 481 aa10.62□□□□□ -0.71
CASP4-212ENST00000533730 EIF4G2P78344 907 aaKnown RBP eCLIP10.62□□□□□ -0.71
CASP4-212ENST00000533730 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
CASP4-212ENST00000533730 KRT28Q7Z3Y7 464 aa10.62□□□□□ -0.71
CASP4-212ENST00000533730 PMFBP1Q8TBY8 1022 aa10.62□□□□□ -0.71
CASP4-212ENST00000533730 DDX17Q92841 729 aaKnown RBP10.62□□□□□ -0.71
CASP4-212ENST00000533730 SHPRHQ149N8 1683 aa10.62□□□□□ -0.71
CASP4-212ENST00000533730 SBNO1A3KN83 1393 aa10.62□□□□□ -0.71
CASP4-212ENST00000533730 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
CASP4-212ENST00000533730 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
CASP4-212ENST00000533730 JUNDP17535 347 aa10.61□□□□□ -0.71
CASP4-212ENST00000533730 TMF1P82094 1093 aa10.61□□□□□ -0.71
CASP4-212ENST00000533730 VAC14Q08AM6 782 aa10.61□□□□□ -0.71
CASP4-212ENST00000533730 CDCA8Q53HL2 280 aa10.61□□□□□ -0.71
CASP4-212ENST00000533730 TESK2Q96S53 571 aa10.61□□□□□ -0.71
CASP4-212ENST00000533730 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.61□□□□□ -0.71
CASP4-212ENST00000533730 BRD4O60885 1362 aaPredicted RBP10.61□□□□□ -0.71
CASP4-212ENST00000533730 PNPLA6Q8IY17 1366 aa10.61□□□□□ -0.71
CASP4-212ENST00000533730 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
CASP4-212ENST00000533730 TRIM34Q9BYJ4 488 aa10.6□□□□□ -0.71
CASP4-212ENST00000533730 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
CASP4-212ENST00000533730 SPATA31A3Q5VYP0 1347 aa10.59□□□□□ -0.71
CASP4-212ENST00000533730 TNS3Q68CZ2 1445 aa10.59□□□□□ -0.71
CASP4-212ENST00000533730 XPCQ01831 940 aaPredicted RBP10.59□□□□□ -0.71
CASP4-212ENST00000533730 NINLQ9Y2I6 1382 aa10.59□□□□□ -0.71
CASP4-212ENST00000533730 ACEP12821 1306 aa10.58□□□□□ -0.71
CASP4-212ENST00000533730 PALM3A6NDB9 673 aaPredicted RBP10.58□□□□□ -0.72
CASP4-212ENST00000533730 PPEF1O14829 653 aaPredicted RBP10.58□□□□□ -0.72
CASP4-212ENST00000533730 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
CASP4-212ENST00000533730 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
CASP4-212ENST00000533730 IVNS1ABPQ9Y6Y0 642 aa10.58□□□□□ -0.72
CASP4-212ENST00000533730 COL22A1Q8NFW1 1626 aaPredicted RBP10.58□□□□□ -0.72
CASP4-212ENST00000533730 MED1Q15648 1581 aaPredicted RBP10.57□□□□□ -0.72
CASP4-212ENST00000533730 LMOD1P29536 600 aaPredicted RBP10.57□□□□□ -0.72
CASP4-212ENST00000533730 GGCXP38435 758 aa10.57□□□□□ -0.72
CASP4-212ENST00000533730 LYPD8Q6UX82 237 aa10.57□□□□□ -0.72
CASP4-212ENST00000533730 ANKLE1Q8NAG6 615 aa10.57□□□□□ -0.72
CASP4-212ENST00000533730 ALG2Q9H553 416 aa10.57□□□□□ -0.72
CASP4-212ENST00000533730 TRPM3Q9HCF6 1732 aaPredicted RBP10.56□□□□□ -0.72
CASP4-212ENST00000533730 PER1O15534 1290 aaPredicted RBP10.56□□□□□ -0.72
CASP4-212ENST00000533730 HSPA5P11021 654 aaKnown RBP10.56□□□□□ -0.72
CASP4-212ENST00000533730 TERF2IPQ9NYB0 399 aa10.56□□□□□ -0.72
CASP4-212ENST00000533730 DISP3Q9P2K9 1392 aa10.55□□□□□ -0.72
CASP4-212ENST00000533730 E9PSI1 815 aa10.55□□□□□ -0.72
CASP4-212ENST00000533730 IGSF3O75054 1194 aa10.55□□□□□ -0.72
CASP4-212ENST00000533730 PTPRNQ16849 979 aa10.55□□□□□ -0.72
CASP4-212ENST00000533730 MEX3CQ5U5Q3 659 aaKnown RBP10.55□□□□□ -0.72
CASP4-212ENST00000533730 HDGFL2Q7Z4V5 671 aaPredicted RBP10.55□□□□□ -0.72
CASP4-212ENST00000533730 LRRN4Q8WUT4 740 aa10.55□□□□□ -0.72
CASP4-212ENST00000533730 UCN2Q96RP3 112 aa10.55□□□□□ -0.72
CASP4-212ENST00000533730 FCF1Q9Y324 198 aaKnown RBP10.55□□□□□ -0.72
CASP4-212ENST00000533730 USP6P35125 1406 aa10.55□□□□□ -0.72
CASP4-212ENST00000533730 CPSF1Q10570 1443 aaKnown RBP10.55□□□□□ -0.72
CASP4-212ENST00000533730 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
CASP4-212ENST00000533730 PLA2G2CQ5R387 149 aa10.54□□□□□ -0.72
CASP4-212ENST00000533730 HELBQ8NG08 1087 aaPredicted RBP10.54□□□□□ -0.72
CASP4-212ENST00000533730 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
CASP4-212ENST00000533730 ALS2Q96Q42 1657 aa10.53□□□□□ -0.72
CASP4-212ENST00000533730 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
CASP4-212ENST00000533730 ZEB1P37275 1124 aaPredicted RBP10.53□□□□□ -0.72
CASP4-212ENST00000533730 TSC1Q92574 1164 aa10.53□□□□□ -0.72
CASP4-212ENST00000533730 EMID1Q96A84 441 aaPredicted RBP10.53□□□□□ -0.72
CASP4-212ENST00000533730 NUDT12Q9BQG2 462 aa10.53□□□□□ -0.72
CASP4-212ENST00000533730 VRTNQ9H8Y1 702 aa10.53□□□□□ -0.72
CASP4-212ENST00000533730 TFIP11Q9UBB9 837 aaKnown RBP10.53□□□□□ -0.72
CASP4-212ENST00000533730 LRP6O75581 1613 aa10.53□□□□□ -0.72
CASP4-212ENST00000533730 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
CASP4-212ENST00000533730 AKAP12Q02952 1782 aa10.52□□□□□ -0.72
CASP4-212ENST00000533730 TMEM88BA6NKF7 163 aa10.52□□□□□ -0.73
CASP4-212ENST00000533730 SND1Q7KZF4 910 aaKnown RBP eCLIP10.52□□□□□ -0.73
CASP4-212ENST00000533730 NLRP13Q86W25 1043 aa10.52□□□□□ -0.73
CASP4-212ENST00000533730 SLC12A5Q9H2X9 1139 aa10.52□□□□□ -0.73
CASP4-212ENST00000533730 EVA1BQ9NVM1 165 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms