RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 PKP1Q13835 747 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 KRT24Q2M2I5 525 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 RBM42Q9BTD8 480 aaKnown RBP4.87□□□□□ -1.63
ATM-221ENST00000533690 NSFL1CQ9UNZ2 370 aaKnown RBP4.87□□□□□ -1.63
ATM-221ENST00000533690 MYH2Q9UKX2 1941 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 GOLGA6L3A6NEY3 463 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 CNGB1Q14028 1251 aaPredicted RBP4.86□□□□□ -1.63
ATM-221ENST00000533690 USP44Q9H0E7 712 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 RBSNQ9H1K0 784 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 TMEM63CQ9P1W3 806 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 SETD1BQ9UPS6 1966 aaKnown RBP4.86□□□□□ -1.63
ATM-221ENST00000533690 NCKAP5LQ9HCH0 1330 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 RGPD3A6NKT7 1758 aaPredicted RBP4.86□□□□□ -1.63
ATM-221ENST00000533690 RGPD4Q7Z3J3 1758 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 MYH13Q9UKX3 1938 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 FAM83GA6ND36 823 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 RRP9O43818 475 aaKnown RBP4.86□□□□□ -1.63
ATM-221ENST00000533690 TPM2P07951 284 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 MCM2P49736 904 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 EVCP57679 992 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 GGT6Q6P531 493 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 IL17REQ8NFR9 667 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 MEIS3Q99687 375 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 BCL2L13Q9BXK5 485 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 ZNF609O15014 1411 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 TTC41PQ6P2S7 1318 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 TAF1LQ8IZX4 1826 aa4.86□□□□□ -1.63
ATM-221ENST00000533690 CTIFO43310 598 aaKnown RBP4.85□□□□□ -1.63
ATM-221ENST00000533690 RFX5P48382 616 aaPredicted RBP4.85□□□□□ -1.63
ATM-221ENST00000533690 UVSSAQ2YD98 709 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 ITPRIPQ8IWB1 547 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 EYA1Q99502 592 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 POLR3GLQ9BT43 218 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 THSD7AQ9UPZ6 1657 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 ESPNB1AK53 854 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 SYCP1Q15431 976 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 G2E3Q7L622 706 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 C16orf71Q8IYS4 520 aaPredicted RBP4.85□□□□□ -1.63
ATM-221ENST00000533690 SRCIN1Q9C0H9 1055 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 PALD1Q9ULE6 856 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 NRXN2Q9P2S2 1712 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 SGSM2O43147 1006 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 AP5Z1O43299 807 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 RAB11FIP3O75154 756 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 EIF4A1P60842 406 aaKnown RBP4.85□□□□□ -1.63
ATM-221ENST00000533690 NUCB2P80303 420 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 NECTIN1Q15223 517 aa4.85□□□□□ -1.63
ATM-221ENST00000533690 RABL6Q3YEC7 729 aaPredicted RBP4.85□□□□□ -1.63
ATM-221ENST00000533690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATM-221ENST00000533690 ABCC12Q96J65 1359 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 ANKRD7Q92527 254 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 THUMPD2Q9BTF0 503 aaKnown RBP4.84□□□□□ -1.63
ATM-221ENST00000533690 ZSWIM6Q9HCJ5 1215 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 MAP3K15Q6ZN16 1313 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 PNMA6EA0A0J9YXQ4 647 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 ZSCAN30Q86W11 494 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 UNC5CLQ8IV45 518 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 SPOCK2Q92563 424 aa4.84□□□□□ -1.63
ATM-221ENST00000533690 TNS3Q68CZ2 1445 aa4.84□□□□□ -1.64
ATM-221ENST00000533690 ERC2O15083 957 aa4.84□□□□□ -1.64
ATM-221ENST00000533690 FBLN1P23142 703 aa4.84□□□□□ -1.64
ATM-221ENST00000533690 ADD1P35611 737 aaKnown RBP4.84□□□□□ -1.64
ATM-221ENST00000533690 HSCBQ8IWL3 235 aa4.84□□□□□ -1.64
ATM-221ENST00000533690 ZNF710Q8N1W2 664 aa4.84□□□□□ -1.64
ATM-221ENST00000533690 FAM237AA0A1B0GTK4 181 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 FTSJ3Q8IY81 847 aaKnown RBP4.83□□□□□ -1.64
ATM-221ENST00000533690 IP6K1Q92551 441 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 COG3Q96JB2 828 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 LNPKQ9C0E8 428 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 SLKQ9H2G2 1235 aaPredicted RBP4.83□□□□□ -1.64
ATM-221ENST00000533690 HYPKQ9NX55 129 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 USP25Q9UHP3 1055 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 ZKSCAN5Q9Y2L8 839 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.83□□□□□ -1.64
ATM-221ENST00000533690 MYH1P12882 1939 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 RIC1Q4ADV7 1423 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 CDC25BP30305 580 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 RUFY3Q7L099 469 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 ZGPATQ8N5A5 531 aaKnown RBP4.83□□□□□ -1.64
ATM-221ENST00000533690 TMX3Q96JJ7 454 aa4.83□□□□□ -1.64
ATM-221ENST00000533690 COL1A1P02452 1464 aaPredicted RBP4.83□□□□□ -1.64
ATM-221ENST00000533690 MFAP1P55081 439 aaKnown RBP4.82□□□□□ -1.64
ATM-221ENST00000533690 SRPK2P78362 688 aaKnown RBP4.82□□□□□ -1.64
ATM-221ENST00000533690 HSP90AB2PQ58FF8 381 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 SNX14Q9Y5W7 946 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 LOC285556D6RIA3 1793 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 FOXP2O15409 715 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 PLA2G4DQ86XP0 818 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 GBP4Q96PP9 640 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 KCNF1Q9H3M0 494 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 CCDC9Q9Y3X0 531 aaKnown RBP4.82□□□□□ -1.64
ATM-221ENST00000533690 SH3TC1Q8TE82 1336 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 COL5A2P05997 1499 aaPredicted RBP4.82□□□□□ -1.64
ATM-221ENST00000533690 HMGB1P09429 215 aaKnown RBP4.82□□□□□ -1.64
ATM-221ENST00000533690 FKBP5Q13451 457 aaPredicted RBP4.82□□□□□ -1.64
ATM-221ENST00000533690 RRS1Q15050 365 aaKnown RBP4.82□□□□□ -1.64
ATM-221ENST00000533690 SLX4Q8IY92 1834 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 SMARCC2Q8TAQ2 1214 aa4.82□□□□□ -1.64
ATM-221ENST00000533690 C10orf71Q711Q0 1435 aa4.81□□□□□ -1.64
ATM-221ENST00000533690 PDIA4P13667 645 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms