RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 USP42Q9H9J4 1324 aaKnown RBP27.92■■■□□ 2.06
VPS51-212ENST00000533656 ZPR1O75312 459 aa27.92■■■□□ 2.06
VPS51-212ENST00000533656 KIF6Q6ZMV9 814 aa27.92■■■□□ 2.06
VPS51-212ENST00000533656 ANXA1P04083 346 aa27.91■■■□□ 2.06
VPS51-212ENST00000533656 SLC4A2P04920 1241 aa27.91■■■□□ 2.06
VPS51-212ENST00000533656 GPR162Q16538 588 aa27.91■■■□□ 2.06
VPS51-212ENST00000533656 PELP1Q8IZL8 1130 aaKnown RBP27.9■■■□□ 2.06
VPS51-212ENST00000533656 C4AP0C0L4 1744 aa27.89■■■□□ 2.06
VPS51-212ENST00000533656 ERVV-1B6SEH8 477 aa27.89■■■□□ 2.06
VPS51-212ENST00000533656 COPS6Q7L5N1 327 aa27.89■■■□□ 2.06
VPS51-212ENST00000533656 XAGE3Q8WTP9 111 aa27.89■■■□□ 2.06
VPS51-212ENST00000533656 DDX58O95786 925 aaKnown RBP27.88■■■□□ 2.05
VPS51-212ENST00000533656 ZNF784Q8NCA9 323 aaPredicted RBP27.88■■■□□ 2.05
VPS51-212ENST00000533656 ZNF652Q9Y2D9 606 aa27.88■■■□□ 2.05
VPS51-212ENST00000533656 MAP3K15Q6ZN16 1313 aa27.88■■■□□ 2.05
VPS51-212ENST00000533656 CAMTA2O94983 1202 aa27.87■■■□□ 2.05
VPS51-212ENST00000533656 RARSP54136 660 aaKnown RBP27.87■■■□□ 2.05
VPS51-212ENST00000533656 BRPF1P55201 1214 aaPredicted RBP27.87■■■□□ 2.05
VPS51-212ENST00000533656 CLEC4GQ6UXB4 293 aa27.87■■■□□ 2.05
VPS51-212ENST00000533656 SSH1Q8WYL5 1049 aa27.87■■■□□ 2.05
VPS51-212ENST00000533656 SMC4Q9NTJ3 1288 aa27.87■■■□□ 2.05
VPS51-212ENST00000533656 TBC1D2BQ9UPU7 963 aa27.87■■■□□ 2.05
VPS51-212ENST00000533656 TCERG1O14776 1098 aaKnown RBP27.86■■■□□ 2.05
VPS51-212ENST00000533656 TTLL7Q6ZT98 887 aa27.86■■■□□ 2.05
VPS51-212ENST00000533656 SCN7AQ01118 1682 aa27.86■■■□□ 2.05
VPS51-212ENST00000533656 YBX3P16989 372 aaKnown RBP eCLIP27.85■■■□□ 2.051e-6■■■■□ 22.9
VPS51-212ENST00000533656 AIMP1Q12904 312 aaKnown RBP27.85■■■□□ 2.05
VPS51-212ENST00000533656 FLIIQ13045 1269 aa27.85■■■□□ 2.05
VPS51-212ENST00000533656 USPL1Q5W0Q7 1092 aa27.85■■■□□ 2.05
VPS51-212ENST00000533656 NLGN1Q8N2Q7 840 aa27.85■■■□□ 2.05
VPS51-212ENST00000533656 MRPL50Q8N5N7 158 aaKnown RBP27.85■■■□□ 2.05
VPS51-212ENST00000533656 PHAXQ9H814 394 aaKnown RBP27.85■■■□□ 2.05
VPS51-212ENST00000533656 SRP68Q9UHB9 627 aaKnown RBP27.85■■■□□ 2.05
VPS51-212ENST00000533656 CACNA1FO60840 1977 aa27.85■■■□□ 2.05
VPS51-212ENST00000533656 GYS1P13807 737 aa27.84■■■□□ 2.05
VPS51-212ENST00000533656 PLBD2Q8NHP8 589 aa27.84■■■□□ 2.05
VPS51-212ENST00000533656 ANKRD13DQ6ZTN6 518 aa27.83■■■□□ 2.05
VPS51-212ENST00000533656 BCORQ6W2J9 1755 aa27.83■■■□□ 2.05
VPS51-212ENST00000533656 PTPRCP08575 1304 aa27.82■■■□□ 2.04
VPS51-212ENST00000533656 KIF16BQ96L93 1317 aa27.82■■■□□ 2.04
VPS51-212ENST00000533656 HSP90AB3PQ58FF7 597 aa27.81■■■□□ 2.04
VPS51-212ENST00000533656 GIGYF2Q6Y7W6 1299 aaKnown RBP27.81■■■□□ 2.04
VPS51-212ENST00000533656 FKBP5Q13451 457 aaPredicted RBP27.8■■■□□ 2.04
VPS51-212ENST00000533656 G2E3Q7L622 706 aa27.8■■■□□ 2.04
VPS51-212ENST00000533656 ZBTB3Q9H5J0 574 aa27.8■■■□□ 2.04
VPS51-212ENST00000533656 BCL2L12Q9HB09 334 aa27.8■■■□□ 2.04
VPS51-212ENST00000533656 KIAA1551Q9HCM1 1747 aa27.79■■■□□ 2.04
VPS51-212ENST00000533656 ATP10DQ9P241 1426 aa27.79■■■□□ 2.04
VPS51-212ENST00000533656 KSR2Q6VAB6 950 aa27.79■■■□□ 2.04
VPS51-212ENST00000533656 RIC3Q7Z5B4 369 aa27.79■■■□□ 2.04
VPS51-212ENST00000533656 BCL2L13Q9BXK5 485 aa27.79■■■□□ 2.04
VPS51-212ENST00000533656 KIF13BQ9NQT8 1826 aa27.78■■■□□ 2.04
VPS51-212ENST00000533656 FKBP8Q14318 412 aa27.78■■■□□ 2.04
VPS51-212ENST00000533656 CD2APQ9Y5K6 639 aa27.78■■■□□ 2.04
VPS51-212ENST00000533656 RCAN3Q9UKA8 241 aa27.77■■■□□ 2.04
VPS51-212ENST00000533656 HLFQ16534 295 aa27.76■■■□□ 2.03
VPS51-212ENST00000533656 PI4KAP2A4QPH2 592 aa27.75■■■□□ 2.03
VPS51-212ENST00000533656 PI4KAP1Q8N8J0 262 aa27.75■■■□□ 2.03
VPS51-212ENST00000533656 ARHGAP45Q92619 1136 aa27.75■■■□□ 2.03
VPS51-212ENST00000533656 ADCY9O60503 1353 aa27.74■■■□□ 2.03
VPS51-212ENST00000533656 N4BP2Q86UW6 1770 aaPredicted RBP27.74■■■□□ 2.03
VPS51-212ENST00000533656 IPO8O15397 1037 aaKnown RBP27.74■■■□□ 2.03
VPS51-212ENST00000533656 TCIRG1Q13488 830 aa27.74■■■□□ 2.03
VPS51-212ENST00000533656 MAP3K2Q9Y2U5 619 aa27.74■■■□□ 2.03
VPS51-212ENST00000533656 TM4SF1P30408 202 aa27.73■■■□□ 2.03
VPS51-212ENST00000533656 DNAAF4Q8WXU2 420 aa27.73■■■□□ 2.03
VPS51-212ENST00000533656 SETDB2Q96T68 719 aa27.73■■■□□ 2.03
VPS51-212ENST00000533656 METTL22Q9BUU2 404 aaPredicted RBP27.73■■■□□ 2.03
VPS51-212ENST00000533656 API5Q9BZZ5 524 aaKnown RBP27.73■■■□□ 2.03
VPS51-212ENST00000533656 CARMIL3Q8ND23 1372 aa27.73■■■□□ 2.03
VPS51-212ENST00000533656 BCAR3O75815 825 aa27.72■■■□□ 2.03
VPS51-212ENST00000533656 NEXNQ0ZGT2 675 aa27.72■■■□□ 2.03
VPS51-212ENST00000533656 NFIXQ14938 502 aa27.72■■■□□ 2.03
VPS51-212ENST00000533656 PARP10Q53GL7 1025 aa27.72■■■□□ 2.03
VPS51-212ENST00000533656 TBC1D9BQ66K14 1250 aa27.72■■■□□ 2.03
VPS51-212ENST00000533656 WWC3Q9ULE0 1092 aa27.72■■■□□ 2.03
VPS51-212ENST00000533656 NIP7Q9Y221 180 aaKnown RBP eCLIP27.72■■■□□ 2.03
VPS51-212ENST00000533656 MMP10P09238 476 aa27.71■■■□□ 2.03
VPS51-212ENST00000533656 ZNF34Q8IZ26 560 aa27.71■■■□□ 2.03
VPS51-212ENST00000533656 NOB1Q9ULX3 412 aaKnown RBP27.71■■■□□ 2.03
VPS51-212ENST00000533656 ARFGEF2Q9Y6D5 1785 aa27.71■■■□□ 2.03
VPS51-212ENST00000533656 TRIM28Q13263 835 aaKnown RBP27.7■■■□□ 2.02
VPS51-212ENST00000533656 PARP3Q9Y6F1 533 aa27.7■■■□□ 2.02
VPS51-212ENST00000533656 IBTKQ9P2D0 1353 aaPredicted RBP27.7■■■□□ 2.02
VPS51-212ENST00000533656 ISCA1Q9BUE6 129 aa27.69■■■□□ 2.02
VPS51-212ENST00000533656 PXDNLA1KZ92 1463 aa27.69■■■□□ 2.02
VPS51-212ENST00000533656 NUP98P52948 1817 aa27.69■■■□□ 2.02
VPS51-212ENST00000533656 GRIN3BO60391 1043 aa27.68■■■□□ 2.02
VPS51-212ENST00000533656 POLRMTO00411 1230 aaKnown RBP27.67■■■□□ 2.02
VPS51-212ENST00000533656 ZKSCAN2Q63HK3 967 aa27.67■■■□□ 2.02
VPS51-212ENST00000533656 BICDL1Q6ZP65 573 aa27.67■■■□□ 2.02
VPS51-212ENST00000533656 MYD88Q99836 296 aa27.67■■■□□ 2.02
VPS51-212ENST00000533656 RNF123Q5XPI4 1314 aa27.67■■■□□ 2.02
VPS51-212ENST00000533656 DDR1Q08345 913 aa27.66■■■□□ 2.02
VPS51-212ENST00000533656 ATF7IPQ6VMQ6 1270 aa27.66■■■□□ 2.02
VPS51-212ENST00000533656 PPP1R42Q7Z4L9 355 aa27.66■■■□□ 2.02
VPS51-212ENST00000533656 LINS1Q8NG48 757 aa27.66■■■□□ 2.02
VPS51-212ENST00000533656 FRAT1Q92837 279 aaPredicted RBP27.66■■■□□ 2.02
VPS51-212ENST00000533656 NYXQ9GZU5 481 aa27.66■■■□□ 2.02
VPS51-212ENST00000533656 BRCA1P38398 1863 aaKnown RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms