RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 ERVV-1B6SEH8 477 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 F6X3S4 739 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 SOCS7O14512 581 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 RFC4P35249 363 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 ZKSCAN2Q63HK3 967 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 KSR2Q6VAB6 950 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 FLAD1Q8NFF5 587 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 PLBD2Q8NHP8 589 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 ZBTB3Q9H5J0 574 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 ADCY9O60503 1353 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 CACNA1FO60840 1977 aa15.18■□□□□ 0.02
COMMD9-208ENST00000533643 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
COMMD9-208ENST00000533643 TRIM27P14373 513 aa15.17■□□□□ 0.02
COMMD9-208ENST00000533643 HLFQ16534 295 aa15.17■□□□□ 0.02
COMMD9-208ENST00000533643 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
COMMD9-208ENST00000533643 RIC3Q7Z5B4 369 aa15.17■□□□□ 0.02
COMMD9-208ENST00000533643 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
COMMD9-208ENST00000533643 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
COMMD9-208ENST00000533643 SUPT16HQ9Y5B9 1047 aaKnown RBP15.17■□□□□ 0.02
COMMD9-208ENST00000533643 TUBGCP6Q96RT7 1819 aa15.16■□□□□ 0.02
COMMD9-208ENST00000533643 ZPR1O75312 459 aa15.16■□□□□ 0.02
COMMD9-208ENST00000533643 RRP1P56182 461 aaKnown RBP15.16■□□□□ 0.02
COMMD9-208ENST00000533643 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
COMMD9-208ENST00000533643 BCL2L12Q9HB09 334 aa15.16■□□□□ 0.02
COMMD9-208ENST00000533643 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
COMMD9-208ENST00000533643 MSH5O43196 834 aa15.15■□□□□ 0.02
COMMD9-208ENST00000533643 USPL1Q5W0Q7 1092 aa15.15■□□□□ 0.02
COMMD9-208ENST00000533643 GIGYF2Q6Y7W6 1299 aaKnown RBP15.15■□□□□ 0.02
COMMD9-208ENST00000533643 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
COMMD9-208ENST00000533643 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
COMMD9-208ENST00000533643 PDGFDQ9GZP0 370 aaPredicted RBP15.15■□□□□ 0.02
COMMD9-208ENST00000533643 RGL2O15211 777 aa15.14■□□□□ 0.01
COMMD9-208ENST00000533643 TCIRG1Q13488 830 aa15.14■□□□□ 0.01
COMMD9-208ENST00000533643 R3HDM1Q15032 1099 aaKnown RBP15.14■□□□□ 0.01
COMMD9-208ENST00000533643 CLEC4GQ6UXB4 293 aa15.14■□□□□ 0.01
COMMD9-208ENST00000533643 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
COMMD9-208ENST00000533643 C4AP0C0L4 1744 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 RLBP1P12271 317 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 GYS1P13807 737 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 FKBP8Q14318 412 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 C20orf194Q5TEA3 1177 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 SLC4A10Q6U841 1118 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 DZIP1LQ8IYY4 767 aaKnown RBP15.13■□□□□ 0.01
COMMD9-208ENST00000533643 MYD88Q99836 296 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 ZNF652Q9Y2D9 606 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 ABCC4O15439 1325 aa15.13■□□□□ 0.01
COMMD9-208ENST00000533643 QSER1Q2KHR3 1735 aa15.12■□□□□ 0.01
COMMD9-208ENST00000533643 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
COMMD9-208ENST00000533643 IGKV5-2P06315 115 aa15.12■□□□□ 0.01
COMMD9-208ENST00000533643 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
COMMD9-208ENST00000533643 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
COMMD9-208ENST00000533643 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
COMMD9-208ENST00000533643 PSDA5PKW4 1024 aaPredicted RBP15.11■□□□□ 0.01
COMMD9-208ENST00000533643 MS4A1P11836 297 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 TRIM28Q13263 835 aaKnown RBP15.11■□□□□ 0.01
COMMD9-208ENST00000533643 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 HSP90AB3PQ58FF7 597 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 TBC1D9BQ66K14 1250 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 INTS3Q68E01 1043 aaKnown RBP15.11■□□□□ 0.01
COMMD9-208ENST00000533643 FTSJ3Q8IY81 847 aaKnown RBP15.11■□□□□ 0.01
COMMD9-208ENST00000533643 LINS1Q8NG48 757 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 ISCA1Q9BUE6 129 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 SCN7AQ01118 1682 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
COMMD9-208ENST00000533643 ATP10DQ9P241 1426 aa15.1■□□□□ 0.01
COMMD9-208ENST00000533643 GPTP24298 496 aa15.1■□□□□ 0.01
COMMD9-208ENST00000533643 NEXNQ0ZGT2 675 aa15.1■□□□□ 0.01
COMMD9-208ENST00000533643 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
COMMD9-208ENST00000533643 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
COMMD9-208ENST00000533643 SRCIN1Q9C0H9 1055 aa15.1■□□□□ 0.01
COMMD9-208ENST00000533643 ARFGEF2Q9Y6D5 1785 aa15.1■□□□□ 0.01
COMMD9-208ENST00000533643 NEURL1BA8MQ27 555 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 TM4SF1P30408 202 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 CCT4P50991 539 aaKnown RBP15.09■□□□□ 0.01
COMMD9-208ENST00000533643 NFIXQ14938 502 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 NLGN1Q8N2Q7 840 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 SLC16A10Q8TF71 515 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 NIP7Q9Y221 180 aaKnown RBP eCLIP15.09■□□□□ 0.01
COMMD9-208ENST00000533643 UBN2Q6ZU65 1347 aa15.09■□□□□ 0.01
COMMD9-208ENST00000533643 PXDNLA1KZ92 1463 aa15.08■□□□□ 0.01
COMMD9-208ENST00000533643 MSL1Q68DK7 614 aa15.08■□□□□ 0
COMMD9-208ENST00000533643 NLRP10Q86W26 655 aa15.08■□□□□ 0
COMMD9-208ENST00000533643 SETDB2Q96T68 719 aa15.08■□□□□ 0
COMMD9-208ENST00000533643 NUP98P52948 1817 aa15.08■□□□□ 0
COMMD9-208ENST00000533643 GCKRQ14397 625 aa15.07■□□□□ 0
COMMD9-208ENST00000533643 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
COMMD9-208ENST00000533643 CWC25Q9NXE8 425 aaPredicted RBP15.07■□□□□ 0
COMMD9-208ENST00000533643 COG6Q9Y2V7 657 aa15.07■□□□□ 0
COMMD9-208ENST00000533643 CASZ1Q86V15 1759 aa15.06■□□□□ 0
COMMD9-208ENST00000533643 ZBTB7AO95365 584 aa15.06■□□□□ 0
COMMD9-208ENST00000533643 DDR1Q08345 913 aa15.06■□□□□ 0
COMMD9-208ENST00000533643 PARP10Q53GL7 1025 aa15.06■□□□□ 0
COMMD9-208ENST00000533643 SUSD4Q5VX71 490 aa15.06■□□□□ 0
COMMD9-208ENST00000533643 ITPRIPQ8IWB1 547 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms