RNA–Protein interactions for RNA: ENST00000533507.5

NDUFS3-211, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-211ENST00000533507 TNS1Q9HBL0 1735 aaKnown RBP33.49■■■□□ 2.95
NDUFS3-211ENST00000533507 RC3H1Q5TC82 1133 aaKnown RBP33.49■■■□□ 2.95
NDUFS3-211ENST00000533507 EIF5P55010 431 aaKnown RBP33.48■■■□□ 2.95
NDUFS3-211ENST00000533507 EN1Q05925 392 aaPredicted RBP33.48■■■□□ 2.95
NDUFS3-211ENST00000533507 DZIP3Q86Y13 1208 aaKnown RBP33.48■■■□□ 2.95
NDUFS3-211ENST00000533507 NEXNQ0ZGT2 675 aa33.47■■■□□ 2.95
NDUFS3-211ENST00000533507 ERICH6BQ5W0A0 696 aa33.47■■■□□ 2.95
NDUFS3-211ENST00000533507 MYD88Q99836 296 aa33.47■■■□□ 2.95
NDUFS3-211ENST00000533507 SRCIN1Q9C0H9 1055 aa33.47■■■□□ 2.95
NDUFS3-211ENST00000533507 TAF1LQ8IZX4 1826 aa33.46■■■□□ 2.95
NDUFS3-211ENST00000533507 SMIM5Q71RC9 77 aa33.46■■■□□ 2.95
NDUFS3-211ENST00000533507 RTCBQ9Y3I0 505 aaKnown RBP33.46■■■□□ 2.95
NDUFS3-211ENST00000533507 METTL22Q9BUU2 404 aaPredicted RBP33.44■■■□□ 2.94
NDUFS3-211ENST00000533507 BEND3Q5T5X7 828 aa33.44■■■□□ 2.94
NDUFS3-211ENST00000533507 RPS6KA4O75676 772 aa33.43■■■□□ 2.94
NDUFS3-211ENST00000533507 PHF14O94880 888 aa33.43■■■□□ 2.94
NDUFS3-211ENST00000533507 BAG6P46379 1132 aa33.43■■■□□ 2.94
NDUFS3-211ENST00000533507 EZH2Q15910 746 aaKnown RBP33.43■■■□□ 2.94
NDUFS3-211ENST00000533507 C4BP0C0L5 1744 aa33.43■■■□□ 2.94
NDUFS3-211ENST00000533507 COL15A1P39059 1388 aa33.42■■■□□ 2.94
NDUFS3-211ENST00000533507 HMGB2P26583 209 aaKnown RBP33.42■■■□□ 2.94
NDUFS3-211ENST00000533507 MAP3K15Q6ZN16 1313 aa33.42■■■□□ 2.94
NDUFS3-211ENST00000533507 CWF19L2Q2TBE0 894 aaKnown RBP33.42■■■□□ 2.94
NDUFS3-211ENST00000533507 ZBTB7BO15156 539 aaPredicted RBP33.41■■■□□ 2.94
NDUFS3-211ENST00000533507 CHMP4BQ9H444 224 aaKnown RBP33.41■■■□□ 2.94
NDUFS3-211ENST00000533507 PXDNLA1KZ92 1463 aa33.41■■■□□ 2.94
NDUFS3-211ENST00000533507 RREB1Q92766 1687 aa33.4■■■□□ 2.94
NDUFS3-211ENST00000533507 A0A087WZG4 1122 aa33.4■■■□□ 2.94
NDUFS3-211ENST00000533507 ATP5J2-PTCD1G3V325 749 aa33.4■■■□□ 2.94
NDUFS3-211ENST00000533507 DEFB132Q7Z7B7 95 aa33.4■■■□□ 2.94
NDUFS3-211ENST00000533507 LINS1Q8NG48 757 aa33.39■■■□□ 2.94
NDUFS3-211ENST00000533507 ARFGEF2Q9Y6D5 1785 aa33.38■■■□□ 2.93
NDUFS3-211ENST00000533507 HLFQ16534 295 aa33.38■■■□□ 2.93
NDUFS3-211ENST00000533507 CAMKK2Q96RR4 588 aa33.38■■■□□ 2.93
NDUFS3-211ENST00000533507 PPP4R2Q9NY27 417 aa33.38■■■□□ 2.93
NDUFS3-211ENST00000533507 TRAPPC3LQ5T215 181 aa33.37■■■□□ 2.93
NDUFS3-211ENST00000533507 MEIS3Q99687 375 aa33.37■■■□□ 2.93
NDUFS3-211ENST00000533507 ATP10DQ9P241 1426 aa33.36■■■□□ 2.93
NDUFS3-211ENST00000533507 IGKV5-2P06315 115 aa33.36■■■□□ 2.93
NDUFS3-211ENST00000533507 ALDH1L1O75891 902 aa33.35■■■□□ 2.93
NDUFS3-211ENST00000533507 GIGYF2Q6Y7W6 1299 aaKnown RBP33.35■■■□□ 2.93
NDUFS3-211ENST00000533507 AMIGO3Q86WK7 504 aa33.35■■■□□ 2.93
NDUFS3-211ENST00000533507 C1orf115Q9H7X2 142 aa33.35■■■□□ 2.93
NDUFS3-211ENST00000533507 C9orf78Q9NZ63 289 aaPredicted RBP33.35■■■□□ 2.93
NDUFS3-211ENST00000533507 ERVV-1B6SEH8 477 aa33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 ZBTB40Q9NUA8 1239 aa33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 TFCP2L1Q9NZI6 479 aa33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 NEURL1BA8MQ27 555 aa33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 RFC4P35249 363 aa33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 TCIRG1Q13488 830 aa33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 CCDC125Q86Z20 511 aa33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 ARHGEF1Q92888 912 aaKnown RBP33.34■■■□□ 2.93
NDUFS3-211ENST00000533507 ZPR1O75312 459 aa33.33■■■□□ 2.93
NDUFS3-211ENST00000533507 CCDC136Q96JN2 1154 aa33.33■■■□□ 2.93
NDUFS3-211ENST00000533507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 CAMTA2O94983 1202 aa33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 NUP188Q5SRE5 1749 aa33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 GPTP24298 496 aa33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 AAMPQ13685 434 aa33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 HSP90AB3PQ58FF7 597 aa33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 B4GALNT3Q6L9W6 998 aa33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 USP44Q9H0E7 712 aa33.32■■■□□ 2.92
NDUFS3-211ENST00000533507 RGPD3A6NKT7 1758 aaPredicted RBP33.31■■■□□ 2.92
NDUFS3-211ENST00000533507 RGPD4Q7Z3J3 1758 aa33.31■■■□□ 2.92
NDUFS3-211ENST00000533507 GNAI3P08754 354 aa33.3■■■□□ 2.92
NDUFS3-211ENST00000533507 ZNF827Q17R98 1081 aa33.3■■■□□ 2.92
NDUFS3-211ENST00000533507 UBTFL1P0CB47 393 aaPredicted RBP33.29■■■□□ 2.92
NDUFS3-211ENST00000533507 USPL1Q5W0Q7 1092 aa33.29■■■□□ 2.92
NDUFS3-211ENST00000533507 SRP68Q9UHB9 627 aaKnown RBP33.29■■■□□ 2.92
NDUFS3-211ENST00000533507 ZNF652Q9Y2D9 606 aa33.29■■■□□ 2.92
NDUFS3-211ENST00000533507 GCKRQ14397 625 aa33.29■■■□□ 2.92
NDUFS3-211ENST00000533507 NARFQ9UHQ1 456 aa33.29■■■□□ 2.92
NDUFS3-211ENST00000533507 NBPF7P0C2Y1 421 aaPredicted RBP33.28■■■□□ 2.92
NDUFS3-211ENST00000533507 CWC25Q9NXE8 425 aaPredicted RBP33.28■■■□□ 2.92
NDUFS3-211ENST00000533507 N4BP2Q86UW6 1770 aaPredicted RBP33.27■■■□□ 2.92
NDUFS3-211ENST00000533507 AKT1S1Q96B36 256 aa33.27■■■□□ 2.92
NDUFS3-211ENST00000533507 AFDNP55196 1824 aaKnown RBP33.27■■■□□ 2.92
NDUFS3-211ENST00000533507 MSH5O43196 834 aa33.26■■■□□ 2.92
NDUFS3-211ENST00000533507 ADRA2BP18089 450 aa33.26■■■□□ 2.92
NDUFS3-211ENST00000533507 SSFA2P28290 1259 aa33.26■■■□□ 2.92
NDUFS3-211ENST00000533507 JARID2Q92833 1246 aaPredicted RBP33.26■■■□□ 2.92
NDUFS3-211ENST00000533507 GRM8O00222 908 aa33.26■■■□□ 2.91
NDUFS3-211ENST00000533507 CCDC191Q8NCU4 936 aa33.26■■■□□ 2.91
NDUFS3-211ENST00000533507 ISCA1Q9BUE6 129 aa33.26■■■□□ 2.91
NDUFS3-211ENST00000533507 PCDHB15Q9Y5E8 787 aa33.26■■■□□ 2.91
NDUFS3-211ENST00000533507 NUP98P52948 1817 aa33.26■■■□□ 2.91
NDUFS3-211ENST00000533507 GNAI2P04899 355 aa33.25■■■□□ 2.91
NDUFS3-211ENST00000533507 RTL5Q5HYW3 569 aaPredicted RBP33.25■■■□□ 2.91
NDUFS3-211ENST00000533507 UBR3Q6ZT12 1888 aa33.24■■■□□ 2.91
NDUFS3-211ENST00000533507 NIP7Q9Y221 180 aaKnown RBP eCLIP33.24■■■□□ 2.91
NDUFS3-211ENST00000533507 BICDL1Q6ZP65 573 aa33.23■■■□□ 2.91
NDUFS3-211ENST00000533507 STK32BQ9NY57 414 aa33.23■■■□□ 2.91
NDUFS3-211ENST00000533507 FAM177BA6PVY3 158 aa33.22■■■□□ 2.91
NDUFS3-211ENST00000533507 CLEC4GQ6UXB4 293 aa33.22■■■□□ 2.91
NDUFS3-211ENST00000533507 LRRFIP2Q9Y608 721 aaKnown RBP33.22■■■□□ 2.91
NDUFS3-211ENST00000533507 UBE3BQ7Z3V4 1068 aa33.21■■■□□ 2.91
NDUFS3-211ENST00000533507 NLRP10Q86W26 655 aa33.21■■■□□ 2.91
NDUFS3-211ENST00000533507 UPF1Q92900 1129 aaKnown RBP eCLIP33.21■■■□□ 2.91
NDUFS3-211ENST00000533507 USP42Q9H9J4 1324 aaKnown RBP33.21■■■□□ 2.91
NDUFS3-211ENST00000533507 TRIM28Q13263 835 aaKnown RBP33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms