RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 ZNF330Q9Y3S2 320 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-217ENST00000532877 COL15A1P39059 1388 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 IPO8O15397 1037 aaKnown RBP18.22■□□□□ 0.51
COL16A1-217ENST00000532877 TRIM27P14373 513 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 HMGB2P26583 209 aaKnown RBP18.22■□□□□ 0.51
COL16A1-217ENST00000532877 FKBP5Q13451 457 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-217ENST00000532877 GPR162Q16538 588 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 ATF7IPQ6VMQ6 1270 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 COPS6Q7L5N1 327 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 ARHGAP45Q92619 1136 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 AK7Q96M32 723 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
COL16A1-217ENST00000532877 GNPATO15228 680 aa18.21■□□□□ 0.51
COL16A1-217ENST00000532877 EIF5P55010 431 aaKnown RBP18.21■□□□□ 0.51
COL16A1-217ENST00000532877 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
COL16A1-217ENST00000532877 TNNQ9UQP3 1299 aa18.21■□□□□ 0.51
COL16A1-217ENST00000532877 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
COL16A1-217ENST00000532877 C4AP0C0L4 1744 aa18.2■□□□□ 0.5
COL16A1-217ENST00000532877 ADCY9O60503 1353 aa18.2■□□□□ 0.5
COL16A1-217ENST00000532877 N4BP2Q86UW6 1770 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-217ENST00000532877 RPS6KA4O75676 772 aa18.2■□□□□ 0.5
COL16A1-217ENST00000532877 TTLL7Q6ZT98 887 aa18.2■□□□□ 0.5
COL16A1-217ENST00000532877 API5Q9BZZ5 524 aaKnown RBP18.2■□□□□ 0.5
COL16A1-217ENST00000532877 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
COL16A1-217ENST00000532877 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
COL16A1-217ENST00000532877 AMIGO3Q86WK7 504 aa18.19■□□□□ 0.5
COL16A1-217ENST00000532877 NLGN2Q8NFZ4 835 aa18.19■□□□□ 0.5
COL16A1-217ENST00000532877 RTCBQ9Y3I0 505 aaKnown RBP18.19■□□□□ 0.5
COL16A1-217ENST00000532877 PXDNLA1KZ92 1463 aa18.19■□□□□ 0.5
COL16A1-217ENST00000532877 ABCC4O15439 1325 aa18.19■□□□□ 0.5
COL16A1-217ENST00000532877 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
COL16A1-217ENST00000532877 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
COL16A1-217ENST00000532877 F6X3S4 739 aa18.18■□□□□ 0.5
COL16A1-217ENST00000532877 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL16A1-217ENST00000532877 C20orf194Q5TEA3 1177 aa18.18■□□□□ 0.5
COL16A1-217ENST00000532877 KSR2Q6VAB6 950 aa18.18■□□□□ 0.5
COL16A1-217ENST00000532877 NPM2Q86SE8 214 aaKnown RBP18.18■□□□□ 0.5
COL16A1-217ENST00000532877 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
COL16A1-217ENST00000532877 CLUAP1Q96AJ1 413 aa18.18■□□□□ 0.5
COL16A1-217ENST00000532877 RLBP1P12271 317 aa18.17■□□□□ 0.5
COL16A1-217ENST00000532877 KIF6Q6ZMV9 814 aa18.17■□□□□ 0.5
COL16A1-217ENST00000532877 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
COL16A1-217ENST00000532877 FTSJ3Q8IY81 847 aaKnown RBP18.17■□□□□ 0.5
COL16A1-217ENST00000532877 A0A087WZG4 1122 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 PDE3AQ14432 1141 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 ANKRD13DQ6ZTN6 518 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 SMIM5Q71RC9 77 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
COL16A1-217ENST00000532877 PLBD2Q8NHP8 589 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 PANK1Q8TE04 598 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 ZBTB3Q9H5J0 574 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 MAP3K2Q9Y2U5 619 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 MAP3K15Q6ZN16 1313 aa18.16■□□□□ 0.5
COL16A1-217ENST00000532877 PHF14O94880 888 aa18.15■□□□□ 0.5
COL16A1-217ENST00000532877 MS4A1P11836 297 aa18.15■□□□□ 0.5
COL16A1-217ENST00000532877 ADRA2BP18089 450 aa18.15■□□□□ 0.5
COL16A1-217ENST00000532877 SSFA2P28290 1259 aa18.15■□□□□ 0.5
COL16A1-217ENST00000532877 RIC3Q7Z5B4 369 aa18.15■□□□□ 0.5
COL16A1-217ENST00000532877 DNAAF4Q8WXU2 420 aa18.15■□□□□ 0.5
COL16A1-217ENST00000532877 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
COL16A1-217ENST00000532877 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.5
COL16A1-217ENST00000532877 NUP98P52948 1817 aa18.14■□□□□ 0.5
COL16A1-217ENST00000532877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.49
COL16A1-217ENST00000532877 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.49
COL16A1-217ENST00000532877 ATP10DQ9P241 1426 aa18.14■□□□□ 0.49
COL16A1-217ENST00000532877 CAMTA2O94983 1202 aa18.13■□□□□ 0.49
COL16A1-217ENST00000532877 IRX6P78412 446 aaPredicted RBP18.13■□□□□ 0.49
COL16A1-217ENST00000532877 SLC4A10Q6U841 1118 aa18.13■□□□□ 0.49
COL16A1-217ENST00000532877 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
COL16A1-217ENST00000532877 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
COL16A1-217ENST00000532877 ERVV-1B6SEH8 477 aa18.12■□□□□ 0.49
COL16A1-217ENST00000532877 POLD1P28340 1107 aa18.12■□□□□ 0.49
COL16A1-217ENST00000532877 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
COL16A1-217ENST00000532877 METTL22Q9BUU2 404 aaPredicted RBP18.12■□□□□ 0.49
COL16A1-217ENST00000532877 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
COL16A1-217ENST00000532877 HLFQ16534 295 aa18.11■□□□□ 0.49
COL16A1-217ENST00000532877 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
COL16A1-217ENST00000532877 GIGYF2Q6Y7W6 1299 aaKnown RBP18.11■□□□□ 0.49
COL16A1-217ENST00000532877 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
COL16A1-217ENST00000532877 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
COL16A1-217ENST00000532877 GRIN3BO60391 1043 aa18.1■□□□□ 0.49
COL16A1-217ENST00000532877 NEFLP07196 543 aa18.1■□□□□ 0.49
COL16A1-217ENST00000532877 RFC4P35249 363 aa18.1■□□□□ 0.49
COL16A1-217ENST00000532877 CCT4P50991 539 aaKnown RBP18.1■□□□□ 0.49
COL16A1-217ENST00000532877 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
COL16A1-217ENST00000532877 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
COL16A1-217ENST00000532877 ITPRIPQ8IWB1 547 aa18.1■□□□□ 0.49
COL16A1-217ENST00000532877 MYD88Q99836 296 aa18.1■□□□□ 0.49
COL16A1-217ENST00000532877 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
COL16A1-217ENST00000532877 COG6Q9Y2V7 657 aa18.1■□□□□ 0.49
COL16A1-217ENST00000532877 ZPR1O75312 459 aa18.09■□□□□ 0.49
COL16A1-217ENST00000532877 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
COL16A1-217ENST00000532877 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
COL16A1-217ENST00000532877 CRBNQ96SW2 442 aa18.09■□□□□ 0.49
COL16A1-217ENST00000532877 SRCIN1Q9C0H9 1055 aa18.09■□□□□ 0.49
COL16A1-217ENST00000532877 RGL2O15211 777 aa18.08■□□□□ 0.48
COL16A1-217ENST00000532877 IGKV5-2P06315 115 aa18.08■□□□□ 0.48
COL16A1-217ENST00000532877 HSPA6P17066 643 aa18.08■□□□□ 0.48
COL16A1-217ENST00000532877 USPL1Q5W0Q7 1092 aa18.08■□□□□ 0.48
COL16A1-217ENST00000532877 LINS1Q8NG48 757 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms