RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	ZDHHC16	Q969W1	377 aa		10.91	□□□□□ -0.66
PUM1-223	ENST00000532678	EYA1	Q99502	592 aa		10.91	□□□□□ -0.66
PUM1-223	ENST00000532678	BCL2L12	Q9HB09	334 aa		10.91	□□□□□ -0.66
PUM1-223	ENST00000532678	DDX10	Q13206	875 aa	Known RBP	10.9	□□□□□ -0.66
PUM1-223	ENST00000532678	PIGB	Q92521	554 aa		10.9	□□□□□ -0.66
PUM1-223	ENST00000532678	POLK	Q9UBT6	870 aa		10.9	□□□□□ -0.66
PUM1-223	ENST00000532678	OSBP	P22059	807 aa		10.89	□□□□□ -0.67
PUM1-223	ENST00000532678	EIF4A2	Q14240	407 aa	Known RBP	10.89	□□□□□ -0.67
PUM1-223	ENST00000532678	SMYD5	Q6GMV2	418 aa		10.89	□□□□□ -0.67
PUM1-223	ENST00000532678	DDX12P	Q92771	950 aa		10.89	□□□□□ -0.67
PUM1-223	ENST00000532678	WWC3	Q9ULE0	1092 aa		10.89	□□□□□ -0.67
PUM1-223	ENST00000532678	YBX3	P16989	372 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
PUM1-223	ENST00000532678	MLLT3	P42568	568 aa	Predicted RBP	10.88	□□□□□ -0.67
PUM1-223	ENST00000532678	LINC00116	Q8NCU8	138 aa		10.88	□□□□□ -0.67
PUM1-223	ENST00000532678	AK7	Q96M32	723 aa		10.88	□□□□□ -0.67
PUM1-223	ENST00000532678	PHKG2	P15735	406 aa		10.87	□□□□□ -0.67
PUM1-223	ENST00000532678	NBR1	Q14596	966 aa		10.87	□□□□□ -0.67
PUM1-223	ENST00000532678	ASAP1	Q9ULH1	1129 aa		10.87	□□□□□ -0.67
PUM1-223	ENST00000532678	SPG7	Q9UQ90	795 aa		10.87	□□□□□ -0.67
PUM1-223	ENST00000532678	GOLGB1	Q14789	3259 aa	Known RBP	10.87	□□□□□ -0.67
PUM1-223	ENST00000532678	ITPK1	Q13572	414 aa		10.86	□□□□□ -0.67
PUM1-223	ENST00000532678	TMOD3	Q9NYL9	352 aa		10.86	□□□□□ -0.67
PUM1-223	ENST00000532678	COL5A3	P25940	1745 aa	Predicted RBP	10.86	□□□□□ -0.67
PUM1-223	ENST00000532678	KDM6A	O15550	1401 aa	Predicted RBP	10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	LOC102724428	A0A0B4J2F2	783 aa		10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	GRXCR2	A6NFK2	248 aa		10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	SIK1	P57059	783 aa		10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	SMARCC1	Q92922	1105 aa	Predicted RBP	10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	ADAM33	Q9BZ11	813 aa		10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	KDR	P35968	1356 aa		10.85	□□□□□ -0.67
PUM1-223	ENST00000532678	IGSF1	Q8N6C5	1336 aa		10.84	□□□□□ -0.67
PUM1-223	ENST00000532678	C4A	P0C0L4	1744 aa		10.84	□□□□□ -0.67
PUM1-223	ENST00000532678	ARHGAP33	O14559	1287 aa		10.84	□□□□□ -0.67
PUM1-223	ENST00000532678	AEBP1	Q8IUX7	1158 aa		10.84	□□□□□ -0.67
PUM1-223	ENST00000532678	KIAA1551	Q9HCM1	1747 aa		10.84	□□□□□ -0.67
PUM1-223	ENST00000532678	COL3A1	P02461	1466 aa	Predicted RBP	10.83	□□□□□ -0.68
PUM1-223	ENST00000532678	GNPAT	O15228	680 aa		10.83	□□□□□ -0.68
PUM1-223	ENST00000532678	POTEE	Q6S8J3	1075 aa		10.83	□□□□□ -0.68
PUM1-223	ENST00000532678	CDAN1	Q8IWY9	1227 aa		10.83	□□□□□ -0.68
PUM1-223	ENST00000532678	IFNL2	Q8IZJ0	200 aa		10.83	□□□□□ -0.68
PUM1-223	ENST00000532678	ATG3	Q9NT62	314 aa		10.83	□□□□□ -0.68
PUM1-223	ENST00000532678	TJP1	Q07157	1748 aa		10.83	□□□□□ -0.68
PUM1-223	ENST00000532678	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	VIRMA	Q69YN4	1812 aa	Known RBP	10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	SENP3-EIF4A1	A0A087X0R7	540 aa		10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	PTPRE	P23469	700 aa		10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	ATP6V1A	P38606	617 aa		10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	MTHFS	P49914	203 aa		10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	SLC4A9	Q96Q91	983 aa		10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	CIC	Q96RK0	1608 aa	Predicted RBP	10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	MYH14	Q7Z406	1995 aa	Known RBP	10.82	□□□□□ -0.68
PUM1-223	ENST00000532678	SCN11A	Q9UI33	1791 aa		10.81	□□□□□ -0.68
PUM1-223	ENST00000532678	PPP2R1A	P30153	589 aa		10.81	□□□□□ -0.68
PUM1-223	ENST00000532678	C6orf132	Q5T0Z8	1188 aa		10.81	□□□□□ -0.68
PUM1-223	ENST00000532678	FLAD1	Q8NFF5	587 aa		10.81	□□□□□ -0.68
PUM1-223	ENST00000532678	SLC4A5	Q9BY07	1137 aa		10.81	□□□□□ -0.68
PUM1-223	ENST00000532678	ZNF831	Q5JPB2	1677 aa		10.81	□□□□□ -0.68
PUM1-223	ENST00000532678	ATP10D	Q9P241	1426 aa		10.81	□□□□□ -0.68
PUM1-223	ENST00000532678	KIF13B	Q9NQT8	1826 aa		10.8	□□□□□ -0.68
PUM1-223	ENST00000532678	TULP1	O00294	542 aa	Predicted RBP	10.8	□□□□□ -0.68
PUM1-223	ENST00000532678	SSFA2	P28290	1259 aa		10.8	□□□□□ -0.68
PUM1-223	ENST00000532678	C1QTNF8	P60827	252 aa		10.8	□□□□□ -0.68
PUM1-223	ENST00000532678	PPP1R3G	B7ZBB8	358 aa		10.79	□□□□□ -0.68
PUM1-223	ENST00000532678	GIGYF1	O75420	1035 aa	Predicted RBP	10.79	□□□□□ -0.68
PUM1-223	ENST00000532678	ZNF526	Q8TF50	670 aa	Predicted RBP	10.79	□□□□□ -0.68
PUM1-223	ENST00000532678	KRTAP3-3	Q9BYR6	98 aa		10.79	□□□□□ -0.68
PUM1-223	ENST00000532678	KRTAP3-2	Q9BYR7	98 aa		10.79	□□□□□ -0.68
PUM1-223	ENST00000532678	CD2AP	Q9Y5K6	639 aa		10.79	□□□□□ -0.68
PUM1-223	ENST00000532678	PXDNL	A1KZ92	1463 aa		10.79	□□□□□ -0.68
PUM1-223	ENST00000532678	MAP3K7	O43318	606 aa		10.78	□□□□□ -0.68
PUM1-223	ENST00000532678	GRIN3B	O60391	1043 aa		10.78	□□□□□ -0.68
PUM1-223	ENST00000532678	MMP10	P09238	476 aa		10.78	□□□□□ -0.68
PUM1-223	ENST00000532678	RALBP1	Q15311	655 aa		10.78	□□□□□ -0.68
PUM1-223	ENST00000532678	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.78	□□□□□ -0.68
PUM1-223	ENST00000532678	SULT6B1	Q6IMI4	303 aa		10.78	□□□□□ -0.68
PUM1-223	ENST00000532678	ADCY9	O60503	1353 aa		10.77	□□□□□ -0.68
PUM1-223	ENST00000532678	PTCD1	O75127	700 aa	Known RBP	10.77	□□□□□ -0.69
PUM1-223	ENST00000532678	IL13	P35225	146 aa		10.77	□□□□□ -0.69
PUM1-223	ENST00000532678	CABP4	P57796	275 aa		10.77	□□□□□ -0.69
PUM1-223	ENST00000532678	DCAF5	Q96JK2	942 aa		10.77	□□□□□ -0.69
PUM1-223	ENST00000532678	CFAP53	Q96M91	514 aa		10.77	□□□□□ -0.69
PUM1-223	ENST00000532678	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.77	□□□□□ -0.69
PUM1-223	ENST00000532678	PLEKHG2	Q9H7P9	1386 aa		10.77	□□□□□ -0.69
PUM1-223	ENST00000532678	BRCA1	P38398	1863 aa	Known RBP	10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	C10orf71	Q711Q0	1435 aa		10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	ADAMTS7	Q9UKP4	1686 aa		10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	ERVV-2	B6SEH9	535 aa		10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	TK2	O00142	265 aa		10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	DIAPH1	O60610	1272 aa	Known RBP	10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	C1orf141	Q5JVX7	400 aa		10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	KCNK17	Q96T54	332 aa		10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.76	□□□□□ -0.69
PUM1-223	ENST00000532678	HSP90AB1	P08238	724 aa	Known RBP	10.75	□□□□□ -0.69
PUM1-223	ENST00000532678	HMOX1	P09601	288 aa		10.75	□□□□□ -0.69
PUM1-223	ENST00000532678	LSM11	P83369	360 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
PUM1-223	ENST00000532678	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
PUM1-223	ENST00000532678	SRP68	Q9UHB9	627 aa	Known RBP	10.75	□□□□□ -0.69
PUM1-223	ENST00000532678	RTCB	Q9Y3I0	505 aa	Known RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms