RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 APBA3O96018 575 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 RFC5P40937 340 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 NBPF8Q3BBV2 869 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 NBPF14Q5TI25 921 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 DESI1Q6ICB0 168 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
CDC27-208ENST00000532575 C11orf95C9JLR9 678 aaPredicted RBP12.02□□□□□ -0.49
CDC27-208ENST00000532575 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
CDC27-208ENST00000532575 DCAF11Q8TEB1 546 aa12.02□□□□□ -0.49
CDC27-208ENST00000532575 TSC1Q92574 1164 aa12.02□□□□□ -0.49
CDC27-208ENST00000532575 NUDT16Q96DE0 195 aaKnown RBP12.02□□□□□ -0.49
CDC27-208ENST00000532575 STRN4Q9NRL3 753 aa12.02□□□□□ -0.49
CDC27-208ENST00000532575 TRPM3Q9HCF6 1732 aaPredicted RBP12.02□□□□□ -0.49
CDC27-208ENST00000532575 KIAA0232Q92628 1395 aa12.02□□□□□ -0.49
CDC27-208ENST00000532575 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
CDC27-208ENST00000532575 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
CDC27-208ENST00000532575 CHRNA2Q15822 529 aa12.01□□□□□ -0.49
CDC27-208ENST00000532575 USP35Q9P2H5 1018 aa12□□□□□ -0.49
CDC27-208ENST00000532575 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
CDC27-208ENST00000532575 ANKLE1Q8NAG6 615 aa11.99□□□□□ -0.49
CDC27-208ENST00000532575 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
CDC27-208ENST00000532575 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
CDC27-208ENST00000532575 FCF1Q9Y324 198 aaKnown RBP11.99□□□□□ -0.49
CDC27-208ENST00000532575 ATP7BP35670 1465 aa11.99□□□□□ -0.49
CDC27-208ENST00000532575 THSD7AQ9UPZ6 1657 aa11.99□□□□□ -0.49
CDC27-208ENST00000532575 NUTM2GQ5VZR2 741 aa11.98□□□□□ -0.49
CDC27-208ENST00000532575 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
CDC27-208ENST00000532575 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
CDC27-208ENST00000532575 ACEP12821 1306 aa11.97□□□□□ -0.49
CDC27-208ENST00000532575 AP1G2O75843 785 aa11.97□□□□□ -0.49
CDC27-208ENST00000532575 YY1P25490 414 aa11.97□□□□□ -0.49
CDC27-208ENST00000532575 LYPD8Q6UX82 237 aa11.97□□□□□ -0.49
CDC27-208ENST00000532575 SSH2Q76I76 1423 aa11.96□□□□□ -0.49
CDC27-208ENST00000532575 POLR3AO14802 1390 aaPredicted RBP11.96□□□□□ -0.49
CDC27-208ENST00000532575 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.49
CDC27-208ENST00000532575 CTDSPL2Q05D32 466 aa11.96□□□□□ -0.49
CDC27-208ENST00000532575 PTPRNQ16849 979 aa11.96□□□□□ -0.49
CDC27-208ENST00000532575 PLA2G2CQ5R387 149 aa11.96□□□□□ -0.49
CDC27-208ENST00000532575 LARP1Q6PKG0 1096 aaKnown RBP11.96□□□□□ -0.49
CDC27-208ENST00000532575 NLRP13Q86W25 1043 aa11.96□□□□□ -0.49
CDC27-208ENST00000532575 NUDT12Q9BQG2 462 aa11.96□□□□□ -0.49
CDC27-208ENST00000532575 SPON1Q9HCB6 807 aa11.96□□□□□ -0.49
CDC27-208ENST00000532575 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
CDC27-208ENST00000532575 RAB3GAP2Q9H2M9 1393 aa11.95□□□□□ -0.5
CDC27-208ENST00000532575 CPDO75976 1380 aa11.94□□□□□ -0.5
CDC27-208ENST00000532575 KCNQ2O43526 872 aa11.94□□□□□ -0.5
CDC27-208ENST00000532575 GCP02774 474 aa11.94□□□□□ -0.5
CDC27-208ENST00000532575 TMEM259Q4ZIN3 620 aa11.94□□□□□ -0.5
CDC27-208ENST00000532575 CCDC24Q8N4L8 307 aa11.94□□□□□ -0.5
CDC27-208ENST00000532575 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
CDC27-208ENST00000532575 CCNYL3P0C7X3 344 aa11.93□□□□□ -0.5
CDC27-208ENST00000532575 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
CDC27-208ENST00000532575 USP19O94966 1318 aa11.92□□□□□ -0.5
CDC27-208ENST00000532575 ITSN1Q15811 1721 aa11.92□□□□□ -0.5
CDC27-208ENST00000532575 PLSCR1O15162 318 aa11.92□□□□□ -0.5
CDC27-208ENST00000532575 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
CDC27-208ENST00000532575 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
CDC27-208ENST00000532575 LRRN4Q8WUT4 740 aa11.91□□□□□ -0.5
CDC27-208ENST00000532575 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
CDC27-208ENST00000532575 EVA1BQ9NVM1 165 aa11.91□□□□□ -0.5
CDC27-208ENST00000532575 NINLQ9Y2I6 1382 aa11.91□□□□□ -0.5
CDC27-208ENST00000532575 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
CDC27-208ENST00000532575 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
CDC27-208ENST00000532575 SRPK2P78362 688 aaKnown RBP11.9□□□□□ -0.5
CDC27-208ENST00000532575 PHRF1Q9P1Y6 1649 aaKnown RBP11.89□□□□□ -0.51
CDC27-208ENST00000532575 CRB1P82279 1406 aa11.89□□□□□ -0.51
CDC27-208ENST00000532575 KCNH2Q12809 1159 aa11.89□□□□□ -0.51
CDC27-208ENST00000532575 DDB1Q16531 1140 aa11.89□□□□□ -0.51
CDC27-208ENST00000532575 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
CDC27-208ENST00000532575 MAP10Q9P2G4 905 aa11.89□□□□□ -0.51
CDC27-208ENST00000532575 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
CDC27-208ENST00000532575 OVOS2A0A0J9YW53 1432 aa11.88□□□□□ -0.51
CDC27-208ENST00000532575 OVOS2Q6IE36 1432 aa11.88□□□□□ -0.51
CDC27-208ENST00000532575 BANK1Q8NDB2 785 aa11.88□□□□□ -0.51
CDC27-208ENST00000532575 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
CDC27-208ENST00000532575 COL5A2P05997 1499 aaPredicted RBP11.88□□□□□ -0.51
CDC27-208ENST00000532575 PPIP5K1Q6PFW1 1433 aa11.87□□□□□ -0.51
CDC27-208ENST00000532575 ARHGEF28Q8N1W1 1705 aaKnown RBP11.87□□□□□ -0.51
CDC27-208ENST00000532575 ZBTB7CA1YPR0 619 aa11.87□□□□□ -0.51
CDC27-208ENST00000532575 CTHP32929 405 aa11.87□□□□□ -0.51
CDC27-208ENST00000532575 LIAT1Q6ZQX7 453 aa11.87□□□□□ -0.51
CDC27-208ENST00000532575 TOM1L2Q6ZVM7 507 aa11.87□□□□□ -0.51
CDC27-208ENST00000532575 HMX1Q9NP08 348 aaPredicted RBP11.87□□□□□ -0.51
CDC27-208ENST00000532575 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
CDC27-208ENST00000532575 RREB1Q92766 1687 aa11.87□□□□□ -0.51
CDC27-208ENST00000532575 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
CDC27-208ENST00000532575 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
CDC27-208ENST00000532575 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
CDC27-208ENST00000532575 LMO7Q8WWI1 1683 aa11.85□□□□□ -0.51
CDC27-208ENST00000532575 SLC19A1P41440 591 aa11.85□□□□□ -0.51
CDC27-208ENST00000532575 NBPF1Q3BBV0 1214 aa11.85□□□□□ -0.51
CDC27-208ENST00000532575 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
CDC27-208ENST00000532575 NUP188Q5SRE5 1749 aa11.85□□□□□ -0.51
CDC27-208ENST00000532575 ZBTB24O43167 697 aaPredicted RBP11.84□□□□□ -0.51
CDC27-208ENST00000532575 RPIAP49247 311 aa11.84□□□□□ -0.51
CDC27-208ENST00000532575 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
CDC27-208ENST00000532575 UNC93B1Q9H1C4 597 aa11.84□□□□□ -0.51
CDC27-208ENST00000532575 CABP1Q9NZU7 370 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 739.4 ms