RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PIF1Q9H611 641 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 NOP58Q9Y2X3 529 aaKnown RBP6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 PCDHB11Q9Y5F2 797 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 EMILIN1Q9Y6C2 1016 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 AK5Q9Y6K8 562 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 GPR182O15218 404 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 CD2BP2O95400 341 aaKnown RBP6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 NEFLP07196 543 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 ANAPC15P60006 121 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 SUZ12Q15022 739 aaKnown RBP6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 NLGN1Q8N2Q7 840 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 ZSCAN1Q8NBB4 408 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 SLC16A10Q8TF71 515 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 SLC10A4Q96EP9 437 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 TRIM47Q96LD4 638 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 ATP13A2Q9NQ11 1180 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 ZNF358Q9NW07 568 aa6.1□□□□□ -1.43
AC055878.1-201ENST00000531858 TTC24A2A3L6 582 aaPredicted RBP6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 GIPC1O14908 333 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 FGRP09769 529 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 XRCC5P13010 732 aaKnown RBP6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 GJA8P48165 433 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 AAMPQ13685 434 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 ERFEQ4G0M1 354 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 PMFBP1Q8TBY8 1022 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 SCG3Q8WXD2 468 aaKnown RBP6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 MRFAP1L1Q96HT8 127 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 PURBQ96QR8 312 aaKnown RBP6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 SPG7Q9UQ90 795 aa6.09□□□□□ -1.43
AC055878.1-201ENST00000531858 ATAD2Q6PL18 1390 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 ENPP3O14638 875 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 ZBTB24O43167 697 aaPredicted RBP6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 TNNI2P48788 182 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 TCEAL1Q15170 157 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 HS2ST1Q7LGA3 356 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 USP48Q86UV5 1035 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 GJD3Q8N144 294 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 KIFC2Q96AC6 838 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 MYO19Q96H55 970 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 GPATCH3Q96I76 525 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 PCGF6Q9BYE7 350 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 UNC93B1Q9H1C4 597 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 DNAJC25Q9H1X3 360 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 CCDC87Q9NVE4 849 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 PPME1Q9Y570 386 aa6.08□□□□□ -1.44
AC055878.1-201ENST00000531858 PNMA6FA0A0J9YX94 578 aa6.07□□□□□ -1.44
AC055878.1-201ENST00000531858 MZF1P28698 734 aaPredicted RBP6.07□□□□□ -1.44
AC055878.1-201ENST00000531858 CKAP2LQ8IYA6 745 aa6.07□□□□□ -1.44
AC055878.1-201ENST00000531858 TRMT44Q8IYL2 757 aaKnown RBP6.07□□□□□ -1.44
AC055878.1-201ENST00000531858 SPSB2Q99619 263 aa6.07□□□□□ -1.44
AC055878.1-201ENST00000531858 SRA1Q9HD15 236 aaKnown RBP6.07□□□□□ -1.44
AC055878.1-201ENST00000531858 ATF4P18848 351 aaPredicted RBP6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 JAZF1Q86VZ6 243 aa6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 SLC4A9Q96Q91 983 aa6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 C1QTNF2Q9BXJ5 285 aa6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 ESF1Q9H501 851 aaKnown RBP6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 MAGEC2Q9UBF1 373 aaPredicted RBP6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 WWC3Q9ULE0 1092 aa6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 PRKAB1Q9Y478 270 aa6.06□□□□□ -1.44
AC055878.1-201ENST00000531858 MAGEB6P1A0A0J9YX57 407 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 TMEM229AB2RXF0 380 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 TNFRSF10BO14763 440 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 LGR5O75473 907 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 EIF4BP23588 611 aaKnown RBP6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 ST13P50502 369 aaKnown RBP6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 EPHA4P54764 986 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 RACK1P63244 317 aaKnown RBP6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 DHX37Q8IY37 1157 aaKnown RBP6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 CSRNP1Q96S65 589 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 CARD14Q9BXL6 1004 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 NIF3L1Q9GZT8 377 aa6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 FCF1Q9Y324 198 aaKnown RBP6.05□□□□□ -1.44
AC055878.1-201ENST00000531858 RPLP1P05386 114 aaKnown RBP6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 CTSHP09668 335 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 PCSK2P16519 638 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 GMPRP36959 345 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 BMS1Q14692 1282 aaKnown RBP6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 COX20Q5RI15 118 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 LRP10Q7Z4F1 713 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 FAM160A2Q8N612 972 aaPredicted RBP6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 RASGRP4Q8TDF6 673 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 SEC16BQ96JE7 1060 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 PSMD1Q99460 953 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 C2orf49Q9BVC5 232 aaPredicted RBP6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 SAP130Q9H0E3 1048 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 MYH16Q9H6N6 1097 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 RNF19AQ9NV58 838 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 SUGT1Q9Y2Z0 365 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 RIPOR2Q9Y4F9 1068 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 USP31Q70CQ4 1352 aa6.04□□□□□ -1.44
AC055878.1-201ENST00000531858 K7ELQ4 463 aaPredicted RBP6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 PPP1R12BO60237 982 aaPredicted RBP6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 INHAP05111 366 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 SERINC3Q13530 473 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 AGERQ15109 404 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 ZNF394Q53GI3 561 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 PLEKHG4Q58EX7 1191 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms