RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 NFKBIEO00221 500 aa20.44■□□□□ 0.86
CTSB-220ENST00000531089 RGL2O15211 777 aa20.44■□□□□ 0.86
CTSB-220ENST00000531089 SRGNP10124 158 aa20.44■□□□□ 0.86
CTSB-220ENST00000531089 LMNB1P20700 586 aa20.44■□□□□ 0.86
CTSB-220ENST00000531089 WDR43Q15061 677 aaKnown RBP eCLIP20.44■□□□□ 0.86
CTSB-220ENST00000531089 HLFQ16534 295 aa20.44■□□□□ 0.86
CTSB-220ENST00000531089 RRAGCQ9HB90 399 aa20.44■□□□□ 0.86
CTSB-220ENST00000531089 KDM3BQ7LBC6 1761 aa20.43■□□□□ 0.86
CTSB-220ENST00000531089 SLX4Q8IY92 1834 aa20.43■□□□□ 0.86
CTSB-220ENST00000531089 C21orf2O43822 256 aa20.42■□□□□ 0.86
CTSB-220ENST00000531089 ZNF652Q9Y2D9 606 aa20.42■□□□□ 0.86
CTSB-220ENST00000531089 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
CTSB-220ENST00000531089 RIPK4P57078 832 aa20.41■□□□□ 0.86
CTSB-220ENST00000531089 ST5P78524 1137 aa20.41■□□□□ 0.86
CTSB-220ENST00000531089 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
CTSB-220ENST00000531089 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
CTSB-220ENST00000531089 ZNF219Q9P2Y4 722 aaPredicted RBP20.41■□□□□ 0.86
CTSB-220ENST00000531089 NIP7Q9Y221 180 aaKnown RBP eCLIP20.41■□□□□ 0.861e-6■■■■□ 21.2
CTSB-220ENST00000531089 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
CTSB-220ENST00000531089 FER1L6Q2WGJ9 1857 aa20.41■□□□□ 0.86
CTSB-220ENST00000531089 KLRG2A4D1S0 409 aaPredicted RBP20.4■□□□□ 0.86
CTSB-220ENST00000531089 TPTE2Q6XPS3 522 aa20.4■□□□□ 0.86
CTSB-220ENST00000531089 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
CTSB-220ENST00000531089 CNKSR1Q969H4 720 aa20.4■□□□□ 0.86
CTSB-220ENST00000531089 MASTLQ96GX5 879 aa20.4■□□□□ 0.86
CTSB-220ENST00000531089 RRP7AQ9Y3A4 280 aaKnown RBP20.4■□□□□ 0.86
CTSB-220ENST00000531089 NPHP1O15259 732 aa20.39■□□□□ 0.85
CTSB-220ENST00000531089 RBM46Q8TBY0 533 aaKnown RBP20.39■□□□□ 0.85
CTSB-220ENST00000531089 NUP98P52948 1817 aa20.39■□□□□ 0.85
CTSB-220ENST00000531089 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
CTSB-220ENST00000531089 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
CTSB-220ENST00000531089 TMPOP42166 694 aaKnown RBP20.38■□□□□ 0.85
CTSB-220ENST00000531089 DICER1Q9UPY3 1922 aaKnown RBP20.38■□□□□ 0.85
CTSB-220ENST00000531089 LAMB4A4D0S4 1761 aa20.37■□□□□ 0.85
CTSB-220ENST00000531089 ERVV-1B6SEH8 477 aa20.37■□□□□ 0.85
CTSB-220ENST00000531089 ANP32CO43423 234 aa20.37■□□□□ 0.85
CTSB-220ENST00000531089 TTLL7Q6ZT98 887 aa20.37■□□□□ 0.85
CTSB-220ENST00000531089 C7orf43Q8WVR3 580 aa20.37■□□□□ 0.85
CTSB-220ENST00000531089 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
CTSB-220ENST00000531089 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
CTSB-220ENST00000531089 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
CTSB-220ENST00000531089 PRPF40BQ6NWY9 871 aaKnown RBP20.36■□□□□ 0.85
CTSB-220ENST00000531089 MYL6BP14649 208 aa20.36■□□□□ 0.85
CTSB-220ENST00000531089 DNAJC5GQ8N7S2 189 aa20.36■□□□□ 0.85
CTSB-220ENST00000531089 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
CTSB-220ENST00000531089 POTECB2RU33 542 aa20.35■□□□□ 0.85
CTSB-220ENST00000531089 APLP1P51693 650 aa20.35■□□□□ 0.85
CTSB-220ENST00000531089 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
CTSB-220ENST00000531089 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
CTSB-220ENST00000531089 BABAM1Q9NWV8 329 aa20.35■□□□□ 0.85
CTSB-220ENST00000531089 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
CTSB-220ENST00000531089 MAP3K15Q6ZN16 1313 aa20.34■□□□□ 0.85
CTSB-220ENST00000531089 NPR1P16066 1061 aa20.34■□□□□ 0.85
CTSB-220ENST00000531089 PDIA6Q15084 440 aa20.34■□□□□ 0.85
CTSB-220ENST00000531089 LTBP3Q9NS15 1303 aa20.34■□□□□ 0.85
CTSB-220ENST00000531089 ARFGEF2Q9Y6D5 1785 aa20.33■□□□□ 0.84
CTSB-220ENST00000531089 VEGFAP15692 232 aaPredicted RBP20.33■□□□□ 0.84
CTSB-220ENST00000531089 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.84
CTSB-220ENST00000531089 TNRC6CQ9HCJ0 1690 aaKnown RBP20.32■□□□□ 0.84
CTSB-220ENST00000531089 LMOD3Q0VAK6 560 aa20.32■□□□□ 0.84
CTSB-220ENST00000531089 FSTL1Q12841 308 aa20.32■□□□□ 0.84
CTSB-220ENST00000531089 ERFEQ4G0M1 354 aa20.32■□□□□ 0.84
CTSB-220ENST00000531089 EIF2S2P20042 333 aaKnown RBP20.31■□□□□ 0.84
CTSB-220ENST00000531089 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
CTSB-220ENST00000531089 DPY19L2Q6NUT2 758 aa20.31■□□□□ 0.84
CTSB-220ENST00000531089 ZNF34Q8IZ26 560 aa20.31■□□□□ 0.84
CTSB-220ENST00000531089 TAOK3Q9H2K8 898 aa20.31■□□□□ 0.84
CTSB-220ENST00000531089 TRIM35Q9UPQ4 493 aa20.31■□□□□ 0.84
CTSB-220ENST00000531089 ERBB4Q15303 1308 aa20.3■□□□□ 0.84
CTSB-220ENST00000531089 GTF2E1P29083 439 aaPredicted RBP20.3■□□□□ 0.84
CTSB-220ENST00000531089 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
CTSB-220ENST00000531089 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
CTSB-220ENST00000531089 NUTM1Q86Y26 1132 aa20.3■□□□□ 0.84
CTSB-220ENST00000531089 ZBTB3Q9H5J0 574 aa20.3■□□□□ 0.84
CTSB-220ENST00000531089 CHL1O00533 1208 aa20.29■□□□□ 0.84
CTSB-220ENST00000531089 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
CTSB-220ENST00000531089 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
CTSB-220ENST00000531089 GIGYF2Q6Y7W6 1299 aaKnown RBP20.29■□□□□ 0.84
CTSB-220ENST00000531089 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
CTSB-220ENST00000531089 TIAM2Q8IVF5 1701 aa20.29■□□□□ 0.84
CTSB-220ENST00000531089 UBN2Q6ZU65 1347 aa20.28■□□□□ 0.84
CTSB-220ENST00000531089 GPTP24298 496 aa20.28■□□□□ 0.84
CTSB-220ENST00000531089 OLFM4Q6UX06 510 aa20.28■□□□□ 0.84
CTSB-220ENST00000531089 ANXA1P04083 346 aa20.27■□□□□ 0.84
CTSB-220ENST00000531089 PROSER3Q2NL68 480 aa20.27■□□□□ 0.84
CTSB-220ENST00000531089 CRY2Q49AN0 593 aa20.27■□□□□ 0.84
CTSB-220ENST00000531089 HTRA3P83110 453 aa20.27■□□□□ 0.83
CTSB-220ENST00000531089 CCDC184Q52MB2 194 aa20.27■□□□□ 0.83
CTSB-220ENST00000531089 DDNO94850 711 aaPredicted RBP20.26■□□□□ 0.83
CTSB-220ENST00000531089 CCDC93Q567U6 631 aa20.26■□□□□ 0.83
CTSB-220ENST00000531089 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
CTSB-220ENST00000531089 WDR90Q96KV7 1748 aa20.26■□□□□ 0.83
CTSB-220ENST00000531089 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
CTSB-220ENST00000531089 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
CTSB-220ENST00000531089 PCNTO95613 3336 aa20.24■□□□□ 0.83
CTSB-220ENST00000531089 NTSR2O95665 410 aa20.24■□□□□ 0.83
CTSB-220ENST00000531089 HOXA10P31260 410 aaPredicted RBP20.24■□□□□ 0.83
CTSB-220ENST00000531089 FKBP4Q02790 459 aaKnown RBP eCLIP20.24■□□□□ 0.83
CTSB-220ENST00000531089 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
CTSB-220ENST00000531089 RTKN2Q8IZC4 609 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms