RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 PXDNLA1KZ92 1463 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 VAMP4O75379 141 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 HSPA6P17066 643 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 TGFB2P61812 414 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 NLGN1Q8N2Q7 840 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 ZNF526Q8TF50 670 aaPredicted RBP12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
NCAPD3-208ENST00000530396 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 CNTNAP4Q9C0A0 1308 aa12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 NFKBIBQ15653 356 aa12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 RBM42Q9BTD8 480 aaKnown RBP12.3□□□□□ -0.44
NCAPD3-208ENST00000530396 KDM6AO15550 1401 aaPredicted RBP12.29□□□□□ -0.44
NCAPD3-208ENST00000530396 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
NCAPD3-208ENST00000530396 C4AP0C0L4 1744 aa12.29□□□□□ -0.44
NCAPD3-208ENST00000530396 ABCC4O15439 1325 aa12.29□□□□□ -0.44
NCAPD3-208ENST00000530396 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
NCAPD3-208ENST00000530396 NUCB1Q02818 461 aa12.28□□□□□ -0.44
NCAPD3-208ENST00000530396 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
NCAPD3-208ENST00000530396 ARHGEF1Q92888 912 aaKnown RBP12.28□□□□□ -0.44
NCAPD3-208ENST00000530396 CCDC87Q9NVE4 849 aa12.28□□□□□ -0.44
NCAPD3-208ENST00000530396 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
NCAPD3-208ENST00000530396 KIF3CO14782 793 aa12.27□□□□□ -0.44
NCAPD3-208ENST00000530396 SEC24BO95487 1268 aa12.27□□□□□ -0.44
NCAPD3-208ENST00000530396 GYS1P13807 737 aa12.27□□□□□ -0.44
NCAPD3-208ENST00000530396 CABP4P57796 275 aa12.27□□□□□ -0.44
NCAPD3-208ENST00000530396 IFFO2Q5TF58 517 aa12.27□□□□□ -0.44
NCAPD3-208ENST00000530396 GCC1Q96CN9 775 aa12.27□□□□□ -0.44
NCAPD3-208ENST00000530396 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.44
NCAPD3-208ENST00000530396 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.45
NCAPD3-208ENST00000530396 EIF5BO60841 1220 aaKnown RBP12.27□□□□□ -0.45
NCAPD3-208ENST00000530396 RFC4P35249 363 aa12.27□□□□□ -0.45
NCAPD3-208ENST00000530396 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
NCAPD3-208ENST00000530396 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.45
NCAPD3-208ENST00000530396 BRCA1P38398 1863 aaKnown RBP12.26□□□□□ -0.45
NCAPD3-208ENST00000530396 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
NCAPD3-208ENST00000530396 ZBTB7BO15156 539 aaPredicted RBP12.26□□□□□ -0.45
NCAPD3-208ENST00000530396 HMOX1P09601 288 aa12.26□□□□□ -0.45
NCAPD3-208ENST00000530396 C1orf141Q5JVX7 400 aa12.26□□□□□ -0.45
NCAPD3-208ENST00000530396 MBIPQ9NS73 344 aa12.26□□□□□ -0.45
NCAPD3-208ENST00000530396 CAPN15O75808 1086 aa12.25□□□□□ -0.45
NCAPD3-208ENST00000530396 PTCD1O75127 700 aaKnown RBP12.24□□□□□ -0.45
NCAPD3-208ENST00000530396 DPEP1P16444 411 aa12.24□□□□□ -0.45
NCAPD3-208ENST00000530396 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
NCAPD3-208ENST00000530396 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
NCAPD3-208ENST00000530396 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
NCAPD3-208ENST00000530396 ARFGEF1Q9Y6D6 1849 aa12.24□□□□□ -0.45
NCAPD3-208ENST00000530396 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
NCAPD3-208ENST00000530396 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
NCAPD3-208ENST00000530396 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
NCAPD3-208ENST00000530396 TJP1Q07157 1748 aa12.23□□□□□ -0.45
NCAPD3-208ENST00000530396 USP42Q9H9J4 1324 aaKnown RBP12.23□□□□□ -0.45
NCAPD3-208ENST00000530396 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
NCAPD3-208ENST00000530396 CHL1O00533 1208 aa12.22□□□□□ -0.45
NCAPD3-208ENST00000530396 BMP2KLQ5H9B9 411 aa12.22□□□□□ -0.45
NCAPD3-208ENST00000530396 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
NCAPD3-208ENST00000530396 CHD1LQ86WJ1 897 aa12.22□□□□□ -0.45
NCAPD3-208ENST00000530396 TOMM70O94826 608 aa12.21□□□□□ -0.45
NCAPD3-208ENST00000530396 KCNA3P22001 575 aa12.21□□□□□ -0.45
NCAPD3-208ENST00000530396 DSG3P32926 999 aa12.21□□□□□ -0.45
NCAPD3-208ENST00000530396 GSE1Q14687 1217 aa12.21□□□□□ -0.45
NCAPD3-208ENST00000530396 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
NCAPD3-208ENST00000530396 ANTXR1Q9H6X2 564 aa12.21□□□□□ -0.45
NCAPD3-208ENST00000530396 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
NCAPD3-208ENST00000530396 APLP1P51693 650 aa12.21□□□□□ -0.46
NCAPD3-208ENST00000530396 TSPYL6Q8N831 410 aa12.21□□□□□ -0.46
NCAPD3-208ENST00000530396 C22orf23Q9BZE7 217 aa12.21□□□□□ -0.46
NCAPD3-208ENST00000530396 SRP68Q9UHB9 627 aaKnown RBP12.21□□□□□ -0.46
NCAPD3-208ENST00000530396 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 RBM25P49756 843 aaKnown RBP12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 DDR1Q08345 913 aa12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 PTPRCP08575 1304 aa12.2□□□□□ -0.46
NCAPD3-208ENST00000530396 MRC1P22897 1456 aa12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 C9orf131Q5VYM1 1079 aa12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 INTS5Q6P9B9 1019 aaKnown RBP12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 NMRK2Q9NPI5 230 aa12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
NCAPD3-208ENST00000530396 SNX21Q969T3 373 aa12.18□□□□□ -0.46
NCAPD3-208ENST00000530396 POLRMTO00411 1230 aaKnown RBP12.17□□□□□ -0.46
NCAPD3-208ENST00000530396 ZPR1O75312 459 aa12.17□□□□□ -0.46
NCAPD3-208ENST00000530396 TM4SF1P30408 202 aa12.17□□□□□ -0.46
NCAPD3-208ENST00000530396 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
NCAPD3-208ENST00000530396 RBM46Q8TBY0 533 aaKnown RBP12.17□□□□□ -0.46
NCAPD3-208ENST00000530396 FRAT2O75474 233 aaPredicted RBP12.16□□□□□ -0.46
NCAPD3-208ENST00000530396 RPAP2Q8IXW5 612 aaPredicted RBP12.16□□□□□ -0.46
NCAPD3-208ENST00000530396 RNMTO43148 476 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms