RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TMEM57Q8N5G2 664 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 PI4KAP1Q8N8J0 262 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 CHMP4AQ9BY43 222 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 PTPRCP08575 1304 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 UBR3Q6ZT12 1888 aa13.54□□□□□ -0.24
SOX6-213ENST00000530378 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
SOX6-213ENST00000530378 N4BP2Q86UW6 1770 aaPredicted RBP13.54□□□□□ -0.24
SOX6-213ENST00000530378 EXOC6Q8TAG9 804 aa13.54□□□□□ -0.24
SOX6-213ENST00000530378 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
SOX6-213ENST00000530378 MAP3K2Q9Y2U5 619 aa13.54□□□□□ -0.24
SOX6-213ENST00000530378 GTF3C3Q9Y5Q9 886 aa13.54□□□□□ -0.24
SOX6-213ENST00000530378 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
SOX6-213ENST00000530378 ABCC4O15439 1325 aa13.53□□□□□ -0.24
SOX6-213ENST00000530378 TBC1D2BQ9UPU7 963 aa13.53□□□□□ -0.24
SOX6-213ENST00000530378 COL15A1P39059 1388 aa13.53□□□□□ -0.24
SOX6-213ENST00000530378 CNTNAP4Q9C0A0 1308 aa13.53□□□□□ -0.24
SOX6-213ENST00000530378 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
SOX6-213ENST00000530378 AK7Q96M32 723 aa13.53□□□□□ -0.24
SOX6-213ENST00000530378 NUP98P52948 1817 aa13.52□□□□□ -0.25
SOX6-213ENST00000530378 PLSCR1O15162 318 aa13.52□□□□□ -0.25
SOX6-213ENST00000530378 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
SOX6-213ENST00000530378 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
SOX6-213ENST00000530378 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.25
SOX6-213ENST00000530378 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
SOX6-213ENST00000530378 BAG6P46379 1132 aa13.51□□□□□ -0.25
SOX6-213ENST00000530378 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
SOX6-213ENST00000530378 KIF6Q6ZMV9 814 aa13.51□□□□□ -0.25
SOX6-213ENST00000530378 DNAAF4Q8WXU2 420 aa13.51□□□□□ -0.25
SOX6-213ENST00000530378 BCORQ6W2J9 1755 aa13.51□□□□□ -0.25
SOX6-213ENST00000530378 DDX58O95786 925 aaKnown RBP13.5□□□□□ -0.25
SOX6-213ENST00000530378 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
SOX6-213ENST00000530378 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
SOX6-213ENST00000530378 KSR2Q6VAB6 950 aa13.5□□□□□ -0.25
SOX6-213ENST00000530378 ANKRD13DQ6ZTN6 518 aa13.5□□□□□ -0.25
SOX6-213ENST00000530378 DZIP3Q86Y13 1208 aaKnown RBP13.5□□□□□ -0.25
SOX6-213ENST00000530378 CAMKK2Q96RR4 588 aa13.5□□□□□ -0.25
SOX6-213ENST00000530378 MYD88Q99836 296 aa13.5□□□□□ -0.25
SOX6-213ENST00000530378 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
SOX6-213ENST00000530378 MVPQ14764 893 aaKnown RBP13.5□□□□□ -0.25
SOX6-213ENST00000530378 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
SOX6-213ENST00000530378 PXDNLA1KZ92 1463 aa13.49□□□□□ -0.25
SOX6-213ENST00000530378 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
SOX6-213ENST00000530378 CWF19L2Q2TBE0 894 aaKnown RBP13.49□□□□□ -0.25
SOX6-213ENST00000530378 SRP68Q9UHB9 627 aaKnown RBP13.49□□□□□ -0.25
SOX6-213ENST00000530378 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
SOX6-213ENST00000530378 MS4A1P11836 297 aa13.48□□□□□ -0.25
SOX6-213ENST00000530378 HLFQ16534 295 aa13.48□□□□□ -0.25
SOX6-213ENST00000530378 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
SOX6-213ENST00000530378 ANO8Q9HCE9 1232 aaPredicted RBP13.48□□□□□ -0.25
SOX6-213ENST00000530378 GPTP24298 496 aa13.48□□□□□ -0.25
SOX6-213ENST00000530378 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
SOX6-213ENST00000530378 C1orf115Q9H7X2 142 aa13.48□□□□□ -0.25
SOX6-213ENST00000530378 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
SOX6-213ENST00000530378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
SOX6-213ENST00000530378 RPS6KA4O75676 772 aa13.47□□□□□ -0.25
SOX6-213ENST00000530378 SRCIN1Q9C0H9 1055 aa13.47□□□□□ -0.25
SOX6-213ENST00000530378 TFCP2L1Q9NZI6 479 aa13.47□□□□□ -0.25
SOX6-213ENST00000530378 BEND3Q5T5X7 828 aa13.46□□□□□ -0.25
SOX6-213ENST00000530378 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.25
SOX6-213ENST00000530378 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
SOX6-213ENST00000530378 MEIS3Q99687 375 aa13.46□□□□□ -0.25
SOX6-213ENST00000530378 METTL22Q9BUU2 404 aaPredicted RBP13.46□□□□□ -0.25
SOX6-213ENST00000530378 CAMTA2O94983 1202 aa13.46□□□□□ -0.26
SOX6-213ENST00000530378 IGKV5-2P06315 115 aa13.46□□□□□ -0.26
SOX6-213ENST00000530378 CCT4P50991 539 aaKnown RBP13.46□□□□□ -0.26
SOX6-213ENST00000530378 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.26
SOX6-213ENST00000530378 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.26
SOX6-213ENST00000530378 ATP10DQ9P241 1426 aa13.45□□□□□ -0.26
SOX6-213ENST00000530378 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
SOX6-213ENST00000530378 RTL5Q5HYW3 569 aaPredicted RBP13.45□□□□□ -0.26
SOX6-213ENST00000530378 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
SOX6-213ENST00000530378 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
SOX6-213ENST00000530378 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
SOX6-213ENST00000530378 RFC4P35249 363 aa13.44□□□□□ -0.26
SOX6-213ENST00000530378 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
SOX6-213ENST00000530378 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
SOX6-213ENST00000530378 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
SOX6-213ENST00000530378 A0A087WZG4 1122 aa13.43□□□□□ -0.26
SOX6-213ENST00000530378 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
SOX6-213ENST00000530378 ZPR1O75312 459 aa13.43□□□□□ -0.26
SOX6-213ENST00000530378 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
SOX6-213ENST00000530378 LINS1Q8NG48 757 aa13.43□□□□□ -0.26
SOX6-213ENST00000530378 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
SOX6-213ENST00000530378 SSFA2P28290 1259 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 BCL2L12Q9HB09 334 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 STK32BQ9NY57 414 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 C9orf78Q9NZ63 289 aaPredicted RBP13.42□□□□□ -0.26
SOX6-213ENST00000530378 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 UBN2Q6ZU65 1347 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
SOX6-213ENST00000530378 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
SOX6-213ENST00000530378 ZBTB7BO15156 539 aaPredicted RBP13.41□□□□□ -0.26
SOX6-213ENST00000530378 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
SOX6-213ENST00000530378 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
SOX6-213ENST00000530378 ERVV-1B6SEH8 477 aa13.41□□□□□ -0.26
SOX6-213ENST00000530378 GCKRQ14397 625 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms