RNA–Protein interactions for RNA: ENST00000530330.1

SNX19-208, Transcript of sorting nexin 19, humanhuman

TSL 1 (best)

Gene SNX19, Length 880 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-208ENST00000530330 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
SNX19-208ENST00000530330 OSBPL2Q9H1P3 480 aa8.24□□□□□ -1.09
SNX19-208ENST00000530330 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
SNX19-208ENST00000530330 ZBTB39O15060 712 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 CPNE3O75131 537 aaKnown RBP8.23□□□□□ -1.09
SNX19-208ENST00000530330 STAU1O95793 577 aaKnown RBP8.23□□□□□ -1.09
SNX19-208ENST00000530330 PTPN12Q05209 780 aaKnown RBP8.23□□□□□ -1.09
SNX19-208ENST00000530330 TRIM32Q13049 653 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 DGKZQ13574 1117 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 HIF1AQ16665 826 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 POTEAQ6S8J7 498 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 IFT43Q96FT9 208 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.23□□□□□ -1.09
SNX19-208ENST00000530330 TMPRSS4Q9NRS4 437 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
SNX19-208ENST00000530330 TEAD4Q15561 434 aa8.22□□□□□ -1.09
SNX19-208ENST00000530330 ZNF394Q53GI3 561 aa8.22□□□□□ -1.09
SNX19-208ENST00000530330 ALDH16A1Q8IZ83 802 aa8.22□□□□□ -1.09
SNX19-208ENST00000530330 CDK15Q96Q40 435 aa8.22□□□□□ -1.09
SNX19-208ENST00000530330 CHMP4AQ9BY43 222 aa8.22□□□□□ -1.09
SNX19-208ENST00000530330 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
SNX19-208ENST00000530330 CTSHP09668 335 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 IBSPP21815 317 aaPredicted RBP8.21□□□□□ -1.1
SNX19-208ENST00000530330 GTF2E1P29083 439 aaPredicted RBP8.21□□□□□ -1.1
SNX19-208ENST00000530330 C8orf34Q49A92 452 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 PPP1R18Q6NYC8 613 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 ETFBKMTQ8IXQ9 262 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 CKAP2LQ8IYA6 745 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 XAGE2Q96GT9 111 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 SRCIN1Q9C0H9 1055 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 C12orf49Q9H741 205 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNX19-208ENST00000530330 PCDHGB7Q9Y5F8 929 aa8.21□□□□□ -1.1
SNX19-208ENST00000530330 EML1O00423 815 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 ORC1Q13415 861 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 MRFAP1L1Q96HT8 127 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 ESYT1Q9BSJ8 1104 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 FAM8A1Q9UBU6 413 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 TBX22Q9Y458 520 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 SCRIBQ14160 1630 aa8.2□□□□□ -1.1
SNX19-208ENST00000530330 NOS2P35228 1153 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 GJA8P48165 433 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 ST13P50502 369 aaKnown RBP8.19□□□□□ -1.1
SNX19-208ENST00000530330 NR5A1Q13285 461 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
SNX19-208ENST00000530330 TJAP1Q5JTD0 557 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 PPP1R26Q5T8A7 1209 aaPredicted RBP8.19□□□□□ -1.1
SNX19-208ENST00000530330 NBPF6Q5VWK0 638 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 MCF2L2Q86YR7 1114 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 MPNDQ8N594 471 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 CNKSR1Q969H4 720 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 NUDT16Q96DE0 195 aaKnown RBP8.19□□□□□ -1.1
SNX19-208ENST00000530330 NBPF4Q96M43 638 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 POLR3GLQ9BT43 218 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 CABP1Q9NZU7 370 aa8.19□□□□□ -1.1
SNX19-208ENST00000530330 LILRA1O75019 489 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 FGRP09769 529 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 GGCXP38435 758 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 RACK1P63244 317 aaKnown RBP8.18□□□□□ -1.1
SNX19-208ENST00000530330 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNX19-208ENST00000530330 EGFLAMQ63HQ2 1017 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 ZNF662Q6ZS27 426 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 TREML1Q86YW5 311 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 ZCRB1Q8TBF4 217 aaKnown RBP8.18□□□□□ -1.1
SNX19-208ENST00000530330 GPR152Q8TDT2 470 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 L3MBTL2Q969R5 705 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 GPRASP2Q96D09 838 aa8.18□□□□□ -1.1
SNX19-208ENST00000530330 ADH1CP00326 375 aa8.17□□□□□ -1.1
SNX19-208ENST00000530330 C1orf53Q5VUE5 145 aa8.17□□□□□ -1.1
SNX19-208ENST00000530330 ZNF746Q6NUN9 644 aaPredicted RBP8.17□□□□□ -1.1
SNX19-208ENST00000530330 PHACTR1Q9C0D0 580 aa8.17□□□□□ -1.1
SNX19-208ENST00000530330 SRA1Q9HD15 236 aaKnown RBP8.17□□□□□ -1.1
SNX19-208ENST00000530330 KLK14Q9P0G3 267 aa8.17□□□□□ -1.1
SNX19-208ENST00000530330 FNDC3AQ9Y2H6 1198 aaKnown RBP8.17□□□□□ -1.1
SNX19-208ENST00000530330 HCN4Q9Y3Q4 1203 aa8.17□□□□□ -1.1
SNX19-208ENST00000530330 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
SNX19-208ENST00000530330 SBNO2Q9Y2G9 1366 aa8.17□□□□□ -1.1
SNX19-208ENST00000530330 hCG_2014768A0A024R1R8 64 aa8.16□□□□□ -1.1
SNX19-208ENST00000530330 IL2RAP01589 272 aa8.16□□□□□ -1.1
SNX19-208ENST00000530330 ATF4P18848 351 aaPredicted RBP8.16□□□□□ -1.1
SNX19-208ENST00000530330 HSD3B2P26439 372 aa8.16□□□□□ -1.1
SNX19-208ENST00000530330 CLN3Q13286 438 aa8.16□□□□□ -1.1
SNX19-208ENST00000530330 BMS1Q14692 1282 aaKnown RBP8.16□□□□□ -1.1
SNX19-208ENST00000530330 RNF187Q5TA31 235 aaPredicted RBP8.16□□□□□ -1.1
SNX19-208ENST00000530330 SNX29Q8TEQ0 813 aa8.16□□□□□ -1.1
SNX19-208ENST00000530330 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
SNX19-208ENST00000530330 NLRP3Q96P20 1036 aa8.16□□□□□ -1.1
SNX19-208ENST00000530330 NIFKQ9BYG3 293 aaKnown RBP8.16□□□□□ -1.1
SNX19-208ENST00000530330 PIF1Q9H611 641 aa8.16□□□□□ -1.1
SNX19-208ENST00000530330 OPLAHO14841 1288 aa8.15□□□□□ -1.1
SNX19-208ENST00000530330 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
SNX19-208ENST00000530330 GRM5P41594 1212 aa8.15□□□□□ -1.1
SNX19-208ENST00000530330 FAM26DQ5JW98 314 aa8.15□□□□□ -1.1
SNX19-208ENST00000530330 OTUD5Q96G74 571 aa8.15□□□□□ -1.1
SNX19-208ENST00000530330 CWC22Q9HCG8 908 aaKnown RBP8.15□□□□□ -1.1
SNX19-208ENST00000530330 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms