RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CDK11BP21127 795 aaKnown RBP14.64□□□□□ -0.07
SCN3B-206ENST00000530277 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
SCN3B-206ENST00000530277 ABCC4O15439 1325 aa14.64□□□□□ -0.07
SCN3B-206ENST00000530277 ZCCHC11Q5TAX3 1644 aaKnown RBP14.64□□□□□ -0.07
SCN3B-206ENST00000530277 BIN1O00499 593 aa14.64□□□□□ -0.07
SCN3B-206ENST00000530277 IFIT1P09914 478 aaKnown RBP14.64□□□□□ -0.07
SCN3B-206ENST00000530277 NMIQ13287 307 aaPredicted RBP14.64□□□□□ -0.07
SCN3B-206ENST00000530277 GADD45BO75293 160 aaPredicted RBP14.64□□□□□ -0.07
SCN3B-206ENST00000530277 NUP133Q8WUM0 1156 aa14.64□□□□□ -0.07
SCN3B-206ENST00000530277 BICC1Q9H694 974 aaKnown RBP14.64□□□□□ -0.07
SCN3B-206ENST00000530277 HIP1O00291 1037 aa14.63□□□□□ -0.07
SCN3B-206ENST00000530277 TPD52L1Q16890 204 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-206ENST00000530277 SLC4A8Q2Y0W8 1093 aa14.63□□□□□ -0.07
SCN3B-206ENST00000530277 ABCF2Q9UG63 623 aa14.63□□□□□ -0.07
SCN3B-206ENST00000530277 IQSEC3Q9UPP2 1182 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-206ENST00000530277 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
SCN3B-206ENST00000530277 SOS1Q07889 1333 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-206ENST00000530277 POLR3DP05423 398 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-206ENST00000530277 AMOTQ4VCS5 1084 aa14.63□□□□□ -0.07
SCN3B-206ENST00000530277 C17orf53Q8N3J3 647 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-206ENST00000530277 PDILTQ8N807 584 aa14.63□□□□□ -0.07
SCN3B-206ENST00000530277 RTL1A6NKG5 1358 aa14.63□□□□□ -0.07
SCN3B-206ENST00000530277 TIMM10P62072 90 aa14.63□□□□□ -0.07
SCN3B-206ENST00000530277 ZFYVE16Q7Z3T8 1539 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 KIF6Q6ZMV9 814 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 HYPKQ9NX55 129 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 ZFYVE9O95405 1425 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 PROSER3Q2NL68 480 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 SETD1BQ9UPS6 1966 aaKnown RBP14.62□□□□□ -0.07
SCN3B-206ENST00000530277 ADCY5O95622 1261 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 METTL24Q5JXM2 366 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 ZBTB9Q96C00 473 aa14.62□□□□□ -0.07
SCN3B-206ENST00000530277 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
SCN3B-206ENST00000530277 ADAMTS2O95450 1211 aa14.61□□□□□ -0.07
SCN3B-206ENST00000530277 KSR2Q6VAB6 950 aa14.61□□□□□ -0.07
SCN3B-206ENST00000530277 EVI5LQ96CN4 794 aa14.61□□□□□ -0.07
SCN3B-206ENST00000530277 PDE4CQ08493 712 aa14.61□□□□□ -0.07
SCN3B-206ENST00000530277 HSP90AA4PQ58FG1 418 aa14.61□□□□□ -0.07
SCN3B-206ENST00000530277 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
SCN3B-206ENST00000530277 TTC21AQ8NDW8 1320 aa14.61□□□□□ -0.07
SCN3B-206ENST00000530277 SYT1P21579 422 aa14.6□□□□□ -0.07
SCN3B-206ENST00000530277 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
SCN3B-206ENST00000530277 LRRFIP1Q32MZ4 808 aaKnown RBP14.6□□□□□ -0.07
SCN3B-206ENST00000530277 DHX16O60231 1041 aaKnown RBP14.6□□□□□ -0.07
SCN3B-206ENST00000530277 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
SCN3B-206ENST00000530277 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
SCN3B-206ENST00000530277 ZSCAN22P10073 491 aaPredicted RBP14.6□□□□□ -0.07
SCN3B-206ENST00000530277 HELBQ8NG08 1087 aaPredicted RBP14.6□□□□□ -0.07
SCN3B-206ENST00000530277 TMEM63CQ9P1W3 806 aa14.6□□□□□ -0.07
SCN3B-206ENST00000530277 CCDC183Q5T5S1 534 aa14.59□□□□□ -0.07
SCN3B-206ENST00000530277 ZHX1Q9UKY1 873 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-206ENST00000530277 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
SCN3B-206ENST00000530277 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-206ENST00000530277 ZSCAN31Q96LW9 406 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-206ENST00000530277 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-206ENST00000530277 TFCP2Q12800 502 aa14.58□□□□□ -0.07
SCN3B-206ENST00000530277 ANKRD1Q15327 319 aa14.58□□□□□ -0.07
SCN3B-206ENST00000530277 MPHOSPH8Q99549 860 aa14.58□□□□□ -0.07
SCN3B-206ENST00000530277 TRMT1Q9NXH9 659 aaKnown RBP14.58□□□□□ -0.07
SCN3B-206ENST00000530277 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.07
SCN3B-206ENST00000530277 AKAP4Q5JQC9 854 aa14.58□□□□□ -0.08
SCN3B-206ENST00000530277 LRSAM1Q6UWE0 723 aa14.58□□□□□ -0.08
SCN3B-206ENST00000530277 IFNL2Q8IZJ0 200 aa14.58□□□□□ -0.08
SCN3B-206ENST00000530277 RXRAP19793 462 aa14.58□□□□□ -0.08
SCN3B-206ENST00000530277 C16orf45Q96MC5 204 aaPredicted RBP14.58□□□□□ -0.08
SCN3B-206ENST00000530277 ERICH2A1L162 156 aa14.58□□□□□ -0.08
SCN3B-206ENST00000530277 SUCLG2Q96I99 432 aa14.58□□□□□ -0.08
SCN3B-206ENST00000530277 DACT1Q9NYF0 836 aa14.57□□□□□ -0.08
SCN3B-206ENST00000530277 RNMTO43148 476 aaKnown RBP14.57□□□□□ -0.08
SCN3B-206ENST00000530277 VPS53Q5VIR6 699 aa14.57□□□□□ -0.08
SCN3B-206ENST00000530277 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
SCN3B-206ENST00000530277 LMBRD1Q9NUN5 540 aa14.57□□□□□ -0.08
SCN3B-206ENST00000530277 IQGAP3Q86VI3 1631 aa14.57□□□□□ -0.08
SCN3B-206ENST00000530277 MINDY4BA8MYZ0 360 aa14.57□□□□□ -0.08
SCN3B-206ENST00000530277 LINS1Q8NG48 757 aa14.57□□□□□ -0.08
SCN3B-206ENST00000530277 ERCC4Q92889 916 aaPredicted RBP14.57□□□□□ -0.08
SCN3B-206ENST00000530277 CLCN1P35523 988 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 RASEFQ8IZ41 740 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 IP6K1Q92551 441 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 DBNDD2Q9BQY9 259 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 SNX14Q9Y5W7 946 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 PTH1RQ03431 593 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 CREB3L3Q68CJ9 461 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 LDHAL6AQ6ZMR3 332 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 ZNF496Q96IT1 587 aaPredicted RBP14.56□□□□□ -0.08
SCN3B-206ENST00000530277 A1BGP04217 495 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 SNRPA1P09661 255 aaKnown RBP14.56□□□□□ -0.08
SCN3B-206ENST00000530277 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 SAFBQ15424 915 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCN3B-206ENST00000530277 MICU3Q86XE3 530 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 SEC62Q99442 399 aaKnown RBP14.56□□□□□ -0.08
SCN3B-206ENST00000530277 TMOD3Q9NYL9 352 aa14.56□□□□□ -0.08
SCN3B-206ENST00000530277 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
SCN3B-206ENST00000530277 Q6ZUG5 572 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 TMX1Q9H3N1 280 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 USP16Q9Y5T5 823 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 CLSTN1O94985 981 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
SCN3B-206ENST00000530277 TSC1Q92574 1164 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 NCOA5Q9HCD5 579 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms