RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 CCDC40Q4G0X9 1142 aa14.95□□□□□ -0.02
MACF1-230ENST00000530275 PYM1Q9BRP8 204 aaKnown RBP14.95□□□□□ -0.02
MACF1-230ENST00000530275 TNNT1P13805 278 aa14.95□□□□□ -0.02
MACF1-230ENST00000530275 GSDMDP57764 484 aa14.95□□□□□ -0.02
MACF1-230ENST00000530275 TIAM1Q13009 1591 aa14.95□□□□□ -0.02
MACF1-230ENST00000530275 STXBP4Q6ZWJ1 553 aa14.95□□□□□ -0.02
MACF1-230ENST00000530275 FAM135AQ9P2D6 1515 aa14.95□□□□□ -0.02
MACF1-230ENST00000530275 RARSP54136 660 aaKnown RBP14.94□□□□□ -0.02
MACF1-230ENST00000530275 GJB2P29033 226 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
MACF1-230ENST00000530275 CEP63Q96MT8 703 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 PTPRCP08575 1304 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 KIF5BP33176 963 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 CKAP2LQ8IYA6 745 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 RNF187Q5TA31 235 aaPredicted RBP14.94□□□□□ -0.02
MACF1-230ENST00000530275 TMC6Q7Z403 805 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 TCP11L1Q9NUJ3 509 aa14.94□□□□□ -0.02
MACF1-230ENST00000530275 TMCO5BA8MYB1 307 aa14.93□□□□□ -0.02
MACF1-230ENST00000530275 SSFA2P28290 1259 aa14.93□□□□□ -0.02
MACF1-230ENST00000530275 WDR78Q5VTH9 848 aa14.93□□□□□ -0.02
MACF1-230ENST00000530275 KAT14Q9H8E8 782 aa14.93□□□□□ -0.02
MACF1-230ENST00000530275 MPRIPQ6WCQ1 1025 aa14.93□□□□□ -0.02
MACF1-230ENST00000530275 GIGYF2Q6Y7W6 1299 aaKnown RBP14.93□□□□□ -0.02
MACF1-230ENST00000530275 TTC21AQ8NDW8 1320 aa14.93□□□□□ -0.02
MACF1-230ENST00000530275 RAPGEF3O95398 923 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 TMEM67Q5HYA8 995 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 SPDYE4A6NLX3 237 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 F6X3S4 739 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 LRRC27Q9C0I9 530 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 COMMD10Q9Y6G5 202 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 PPM1EQ8WY54 764 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 CBX1P83916 185 aa14.92□□□□□ -0.02
MACF1-230ENST00000530275 TRMT1Q9NXH9 659 aaKnown RBP14.92□□□□□ -0.02
MACF1-230ENST00000530275 KANK3Q6NY19 840 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 GOLGA6L9A6NEM1 432 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 PDE4BQ07343 736 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 HLTFQ14527 1009 aaKnown RBP eCLIP14.91□□□□□ -0.022e-6■■■□□ 15.1
MACF1-230ENST00000530275 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 DBF4Q9UBU7 674 aaPredicted RBP14.91□□□□□ -0.02
MACF1-230ENST00000530275 WDR97A6NE52 1622 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 SPTY2D1Q68D10 685 aaPredicted RBP14.91□□□□□ -0.02
MACF1-230ENST00000530275 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 CCDC144CPQ8IYA2 1237 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 TMEM87AQ8NBN3 555 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 PRC1O43663 620 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 CTR9Q6PD62 1173 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 SYCP3Q8IZU3 236 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 FAM107BQ9H098 131 aa14.91□□□□□ -0.02
MACF1-230ENST00000530275 CCDC175P0C221 793 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 IARSP41252 1262 aaKnown RBP14.9□□□□□ -0.02
MACF1-230ENST00000530275 DRC1Q96MC2 740 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 USP25Q9UHP3 1055 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 MAP3K2Q9Y2U5 619 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 CCDC184Q52MB2 194 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 NME9Q86XW9 330 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 GOLIM4O00461 696 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 METAP2P50579 478 aaKnown RBP eCLIP14.9□□□□□ -0.023e-7■■■■■ 27.6
MACF1-230ENST00000530275 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
MACF1-230ENST00000530275 PRPF4BQ13523 1007 aaKnown RBP14.9□□□□□ -0.02
MACF1-230ENST00000530275 TSNARE1Q96NA8 513 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 POLR3GO15318 223 aaPredicted RBP14.9□□□□□ -0.02
MACF1-230ENST00000530275 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
MACF1-230ENST00000530275 SPECC1Q5M775 1068 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 FERMT1Q9BQL6 677 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 USP16Q9Y5T5 823 aa14.9□□□□□ -0.02
MACF1-230ENST00000530275 BIN1O00499 593 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 MFSD6Q6ZSS7 791 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 MAATS1Q7Z4T9 603 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
MACF1-230ENST00000530275 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 STX6O43752 255 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 BAG3O95817 575 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 LDHCP07864 332 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 FEZ1Q99689 392 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 CABP5Q9NP86 173 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
MACF1-230ENST00000530275 C16orf45Q96MC5 204 aaPredicted RBP14.89□□□□□ -0.03
MACF1-230ENST00000530275 CDC5LQ99459 802 aaKnown RBP14.89□□□□□ -0.03
MACF1-230ENST00000530275 FSD2A1L4K1 749 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 PABPN1LA6NDY0 278 aaKnown RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 TSPY2A6NKD2 308 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 IFI16Q16666 785 aaKnown RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 NCOA7Q8NI08 942 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 HOMER2Q9NSB8 354 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 CWC25Q9NXE8 425 aaPredicted RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 NOP2P46087 812 aaKnown RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 SNW1Q13573 536 aaKnown RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 TICAM2Q86XR7 235 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 MPHOSPH6Q99547 160 aaKnown RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 ECHDC1Q9NTX5 307 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 EXOC1Q9NV70 894 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 FERP16591 822 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 VAT1LQ9HCJ6 419 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 RMND1Q9NWS8 449 aa14.88□□□□□ -0.03
MACF1-230ENST00000530275 PUF60Q9UHX1 559 aaKnown RBP14.88□□□□□ -0.03
MACF1-230ENST00000530275 IDEP14735 1019 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms