RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 PIK3C2BO00750 1634 aa10.86□□□□□ -0.67
SVIP-204ENST00000530199 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
SVIP-204ENST00000530199 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
SVIP-204ENST00000530199 ASXL1Q8IXJ9 1541 aa10.85□□□□□ -0.67
SVIP-204ENST00000530199 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
SVIP-204ENST00000530199 C1QTNF2Q9BXJ5 285 aa10.85□□□□□ -0.67
SVIP-204ENST00000530199 UNC13BO14795 1591 aa10.85□□□□□ -0.67
SVIP-204ENST00000530199 ZNF644Q9H582 1327 aaPredicted RBP10.84□□□□□ -0.67
SVIP-204ENST00000530199 SH3BP2P78314 561 aa10.84□□□□□ -0.67
SVIP-204ENST00000530199 B4GALNT3Q6L9W6 998 aa10.84□□□□□ -0.67
SVIP-204ENST00000530199 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
SVIP-204ENST00000530199 DOLKQ9UPQ8 538 aa10.84□□□□□ -0.67
SVIP-204ENST00000530199 DCCP43146 1447 aa10.84□□□□□ -0.67
SVIP-204ENST00000530199 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
SVIP-204ENST00000530199 CCDC141Q6ZP82 1450 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 CLDN10P78369 228 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 SF3B2Q13435 895 aaKnown RBP10.83□□□□□ -0.68
SVIP-204ENST00000530199 RNF20Q5VTR2 975 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 TRIM50Q86XT4 487 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 ANKMY2Q8IV38 441 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 OGFOD1Q8N543 542 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 FAM200AQ8TCP9 573 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
SVIP-204ENST00000530199 NOD1Q9Y239 953 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
SVIP-204ENST00000530199 PPEF1O14829 653 aaPredicted RBP10.82□□□□□ -0.68
SVIP-204ENST00000530199 ADAMTS2O95450 1211 aa10.82□□□□□ -0.68
SVIP-204ENST00000530199 NPM2Q86SE8 214 aaKnown RBP10.82□□□□□ -0.68
SVIP-204ENST00000530199 SPHKAPQ2M3C7 1700 aa10.81□□□□□ -0.68
SVIP-204ENST00000530199 ATP1A2P50993 1020 aa10.81□□□□□ -0.68
SVIP-204ENST00000530199 MFAP1P55081 439 aaKnown RBP10.81□□□□□ -0.68
SVIP-204ENST00000530199 NBPF20Q3BBV1 942 aa10.81□□□□□ -0.68
SVIP-204ENST00000530199 TRMT44Q8IYL2 757 aaKnown RBP10.81□□□□□ -0.68
SVIP-204ENST00000530199 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
SVIP-204ENST00000530199 EIF2AK4Q9P2K8 1649 aaKnown RBP10.8□□□□□ -0.68
SVIP-204ENST00000530199 CFAP65Q6ZU64 1925 aaKnown RBP10.8□□□□□ -0.68
SVIP-204ENST00000530199 ESPNB1AK53 854 aa10.8□□□□□ -0.68
SVIP-204ENST00000530199 C1QTNF8P60827 252 aa10.8□□□□□ -0.68
SVIP-204ENST00000530199 KCNC4Q03721 635 aa10.8□□□□□ -0.68
SVIP-204ENST00000530199 OXLD1Q5BKU9 147 aa10.8□□□□□ -0.68
SVIP-204ENST00000530199 ZNF594Q96JF6 807 aaPredicted RBP10.8□□□□□ -0.68
SVIP-204ENST00000530199 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
SVIP-204ENST00000530199 CEP350Q5VT06 3117 aa10.8□□□□□ -0.68
SVIP-204ENST00000530199 CEP152O94986 1710 aa10.79□□□□□ -0.68
SVIP-204ENST00000530199 ZBTB24O43167 697 aaPredicted RBP10.79□□□□□ -0.68
SVIP-204ENST00000530199 ITGBL1O95965 494 aaPredicted RBP10.79□□□□□ -0.68
SVIP-204ENST00000530199 DPYDQ12882 1025 aa10.79□□□□□ -0.68
SVIP-204ENST00000530199 PHLDB3Q6NSJ2 640 aa10.79□□□□□ -0.68
SVIP-204ENST00000530199 LARGE2Q8N3Y3 721 aa10.79□□□□□ -0.68
SVIP-204ENST00000530199 CDV3Q9UKY7 258 aaKnown RBP10.79□□□□□ -0.68
SVIP-204ENST00000530199 TBX22Q9Y458 520 aa10.79□□□□□ -0.68
SVIP-204ENST00000530199 PLEKHG1Q9ULL1 1385 aa10.78□□□□□ -0.68
SVIP-204ENST00000530199 RNF223E7ERA6 249 aa10.78□□□□□ -0.68
SVIP-204ENST00000530199 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
SVIP-204ENST00000530199 TRIM32Q13049 653 aa10.78□□□□□ -0.68
SVIP-204ENST00000530199 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
SVIP-204ENST00000530199 ZNF784Q8NCA9 323 aaPredicted RBP10.78□□□□□ -0.68
SVIP-204ENST00000530199 CLP1Q92989 425 aaKnown RBP10.78□□□□□ -0.68
SVIP-204ENST00000530199 PCDH10Q9P2E7 1040 aa10.78□□□□□ -0.68
SVIP-204ENST00000530199 PIK3R4Q99570 1358 aa10.77□□□□□ -0.68
SVIP-204ENST00000530199 MST1RQ04912 1400 aa10.77□□□□□ -0.68
SVIP-204ENST00000530199 FYCO1Q9BQS8 1478 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 DKK1O94907 266 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 SSFA2P28290 1259 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 IDI1Q13907 227 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 SIX5Q8N196 739 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 RGS22Q8NE09 1264 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 HCSTQ9UBK5 93 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 KIAA1024Q9UPX6 916 aa10.77□□□□□ -0.69
SVIP-204ENST00000530199 BAG6P46379 1132 aa10.76□□□□□ -0.69
SVIP-204ENST00000530199 GTF2IP78347 998 aa10.76□□□□□ -0.69
SVIP-204ENST00000530199 SWI5Q1ZZU3 235 aa10.76□□□□□ -0.69
SVIP-204ENST00000530199 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
SVIP-204ENST00000530199 MTUS2Q5JR59 1369 aa10.76□□□□□ -0.69
SVIP-204ENST00000530199 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
SVIP-204ENST00000530199 USP4Q13107 963 aa10.75□□□□□ -0.69
SVIP-204ENST00000530199 SIRT1Q96EB6 747 aa10.75□□□□□ -0.69
SVIP-204ENST00000530199 PCDHB11Q9Y5F2 797 aa10.75□□□□□ -0.69
SVIP-204ENST00000530199 PCDHGA11Q9Y5H2 935 aa10.75□□□□□ -0.69
SVIP-204ENST00000530199 LAMC1P11047 1609 aa10.75□□□□□ -0.69
SVIP-204ENST00000530199 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
SVIP-204ENST00000530199 VARSP26640 1264 aaKnown RBP10.74□□□□□ -0.69
SVIP-204ENST00000530199 GGCXP38435 758 aa10.74□□□□□ -0.69
SVIP-204ENST00000530199 WNT7BP56706 349 aa10.74□□□□□ -0.69
SVIP-204ENST00000530199 R3HDM1Q15032 1099 aaKnown RBP10.74□□□□□ -0.69
SVIP-204ENST00000530199 SND1Q7KZF4 910 aaKnown RBP eCLIP10.74□□□□□ -0.69
SVIP-204ENST00000530199 KCTD15Q96SI1 283 aaPredicted RBP10.74□□□□□ -0.69
SVIP-204ENST00000530199 UTRNP46939 3433 aa10.74□□□□□ -0.69
SVIP-204ENST00000530199 TSPY4P0CV99 314 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 TSPY10P0CW01 314 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 SKOR1P84550 965 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 CCER1Q8TC90 406 aaPredicted RBP10.73□□□□□ -0.69
SVIP-204ENST00000530199 MTMR7Q9Y216 660 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 RALGAPBQ86X10 1494 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 GLI3P10071 1580 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 ARHGEF5Q12774 1597 aa10.73□□□□□ -0.69
SVIP-204ENST00000530199 COL22A1Q8NFW1 1626 aaPredicted RBP10.73□□□□□ -0.69
SVIP-204ENST00000530199 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms