RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
CMTM1-214ENST00000530141 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
CMTM1-214ENST00000530141 AMOTQ4VCS5 1084 aa10.44□□□□□ -0.74
CMTM1-214ENST00000530141 AMIGO3Q86WK7 504 aa10.44□□□□□ -0.74
CMTM1-214ENST00000530141 DZIP1LQ8IYY4 767 aaKnown RBP10.44□□□□□ -0.74
CMTM1-214ENST00000530141 SLC16A10Q8TF71 515 aa10.44□□□□□ -0.74
CMTM1-214ENST00000530141 ARHGAP45Q92619 1136 aa10.44□□□□□ -0.74
CMTM1-214ENST00000530141 GNAT3A8MTJ3 354 aa10.43□□□□□ -0.74
CMTM1-214ENST00000530141 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
CMTM1-214ENST00000530141 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
CMTM1-214ENST00000530141 C20orf194Q5TEA3 1177 aa10.43□□□□□ -0.74
CMTM1-214ENST00000530141 ATF7IPQ6VMQ6 1270 aa10.43□□□□□ -0.74
CMTM1-214ENST00000530141 ANKRD24Q8TF21 1146 aa10.43□□□□□ -0.74
CMTM1-214ENST00000530141 LTV1Q96GA3 475 aaPredicted RBP10.43□□□□□ -0.74
CMTM1-214ENST00000530141 TSHZ2Q9NRE2 1034 aa10.43□□□□□ -0.74
CMTM1-214ENST00000530141 MBIPQ9NS73 344 aa10.43□□□□□ -0.74
CMTM1-214ENST00000530141 N4BP2Q86UW6 1770 aaPredicted RBP10.43□□□□□ -0.74
CMTM1-214ENST00000530141 KIAA1551Q9HCM1 1747 aa10.42□□□□□ -0.74
CMTM1-214ENST00000530141 CHL1O00533 1208 aa10.42□□□□□ -0.74
CMTM1-214ENST00000530141 TCERG1O14776 1098 aaKnown RBP10.42□□□□□ -0.74
CMTM1-214ENST00000530141 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
CMTM1-214ENST00000530141 MTHFSDQ2M296 383 aaKnown RBP10.42□□□□□ -0.74
CMTM1-214ENST00000530141 TWISTNBQ3B726 338 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-214ENST00000530141 PLEKHO1Q53GL0 409 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-214ENST00000530141 DNAJC5GQ8N7S2 189 aa10.42□□□□□ -0.74
CMTM1-214ENST00000530141 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-214ENST00000530141 DDX19BQ9UMR2 479 aa10.42□□□□□ -0.74
CMTM1-214ENST00000530141 NCAPD2Q15021 1401 aa10.41□□□□□ -0.74
CMTM1-214ENST00000530141 VAMP4O75379 141 aa10.41□□□□□ -0.74
CMTM1-214ENST00000530141 MVPQ14764 893 aaKnown RBP10.41□□□□□ -0.74
CMTM1-214ENST00000530141 SLC27A3Q5K4L6 730 aa10.41□□□□□ -0.74
CMTM1-214ENST00000530141 SSH1Q8WYL5 1049 aa10.41□□□□□ -0.74
CMTM1-214ENST00000530141 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
CMTM1-214ENST00000530141 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
CMTM1-214ENST00000530141 MEGF6O75095 1541 aa10.41□□□□□ -0.74
CMTM1-214ENST00000530141 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.74
CMTM1-214ENST00000530141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-214ENST00000530141 RGL2O15211 777 aa10.4□□□□□ -0.74
CMTM1-214ENST00000530141 POTEJP0CG39 1038 aa10.4□□□□□ -0.74
CMTM1-214ENST00000530141 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-214ENST00000530141 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
CMTM1-214ENST00000530141 NMRK2Q9NPI5 230 aa10.4□□□□□ -0.74
CMTM1-214ENST00000530141 C4BP0C0L5 1744 aa10.4□□□□□ -0.74
CMTM1-214ENST00000530141 CICQ96RK0 1608 aaPredicted RBP10.4□□□□□ -0.75
CMTM1-214ENST00000530141 PHF14O94880 888 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 PLCG2P16885 1265 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 APLP1P51693 650 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 AKAP4Q5JQC9 854 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 BCL2L13Q9BXK5 485 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 TSPYL4Q9UJ04 414 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 NOB1Q9ULX3 412 aaKnown RBP10.39□□□□□ -0.75
CMTM1-214ENST00000530141 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
CMTM1-214ENST00000530141 KDM2BQ8NHM5 1336 aa10.38□□□□□ -0.75
CMTM1-214ENST00000530141 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
CMTM1-214ENST00000530141 MCM10Q7L590 875 aa10.38□□□□□ -0.75
CMTM1-214ENST00000530141 MRPL50Q8N5N7 158 aaKnown RBP10.38□□□□□ -0.75
CMTM1-214ENST00000530141 RWDD1Q9H446 243 aaPredicted RBP10.38□□□□□ -0.75
CMTM1-214ENST00000530141 DLG5Q8TDM6 1919 aa10.38□□□□□ -0.75
CMTM1-214ENST00000530141 TRIM27P14373 513 aa10.37□□□□□ -0.75
CMTM1-214ENST00000530141 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
CMTM1-214ENST00000530141 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-214ENST00000530141 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
CMTM1-214ENST00000530141 PKD1L3Q7Z443 1732 aa10.37□□□□□ -0.75
CMTM1-214ENST00000530141 TNS4Q8IZW8 715 aa10.37□□□□□ -0.75
CMTM1-214ENST00000530141 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
CMTM1-214ENST00000530141 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
CMTM1-214ENST00000530141 PTPRCP08575 1304 aa10.36□□□□□ -0.75
CMTM1-214ENST00000530141 ITGB4P16144 1822 aa10.36□□□□□ -0.75
CMTM1-214ENST00000530141 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
CMTM1-214ENST00000530141 USHBP1Q8N6Y0 703 aa10.36□□□□□ -0.75
CMTM1-214ENST00000530141 RAPGEF4Q8WZA2 1011 aa10.36□□□□□ -0.75
CMTM1-214ENST00000530141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.75
CMTM1-214ENST00000530141 CD2APQ9Y5K6 639 aa10.36□□□□□ -0.75
CMTM1-214ENST00000530141 HOXB7P09629 217 aa10.35□□□□□ -0.75
CMTM1-214ENST00000530141 TATP17735 454 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-214ENST00000530141 ZNF530Q6P9A1 599 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-214ENST00000530141 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
CMTM1-214ENST00000530141 STK31Q9BXU1 1019 aa10.35□□□□□ -0.75
CMTM1-214ENST00000530141 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
CMTM1-214ENST00000530141 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
CMTM1-214ENST00000530141 PXDNLA1KZ92 1463 aa10.35□□□□□ -0.75
CMTM1-214ENST00000530141 KCPQ6ZWJ8 1503 aa10.34□□□□□ -0.75
CMTM1-214ENST00000530141 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
CMTM1-214ENST00000530141 RLBP1P12271 317 aa10.34□□□□□ -0.75
CMTM1-214ENST00000530141 CCDC30Q5VVM6 783 aa10.34□□□□□ -0.75
CMTM1-214ENST00000530141 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
CMTM1-214ENST00000530141 TSPYL6Q8N831 410 aa10.34□□□□□ -0.75
CMTM1-214ENST00000530141 PALLDQ8WX93 1383 aa10.34□□□□□ -0.75
CMTM1-214ENST00000530141 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
CMTM1-214ENST00000530141 ABCC4O15439 1325 aa10.33□□□□□ -0.76
CMTM1-214ENST00000530141 KIF13BQ9NQT8 1826 aa10.33□□□□□ -0.76
CMTM1-214ENST00000530141 TOMM70O94826 608 aa10.33□□□□□ -0.76
CMTM1-214ENST00000530141 TEFQ10587 303 aa10.33□□□□□ -0.76
CMTM1-214ENST00000530141 HDAC1Q13547 482 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-214ENST00000530141 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
CMTM1-214ENST00000530141 TMEM57Q8N5G2 664 aa10.33□□□□□ -0.76
CMTM1-214ENST00000530141 PDCD7Q8N8D1 485 aaKnown RBP10.33□□□□□ -0.76
CMTM1-214ENST00000530141 KLRG1Q96E93 195 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms