RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 HLFQ16534 295 aa11.24□□□□□ -0.61
UBASH3B-205ENST00000529998 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
UBASH3B-205ENST00000529998 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
UBASH3B-205ENST00000529998 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBASH3B-205ENST00000529998 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
UBASH3B-205ENST00000529998 POLRMTO00411 1230 aaKnown RBP11.23□□□□□ -0.61
UBASH3B-205ENST00000529998 EXOSC9Q06265 439 aaKnown RBP11.23□□□□□ -0.61
UBASH3B-205ENST00000529998 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
UBASH3B-205ENST00000529998 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
UBASH3B-205ENST00000529998 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
UBASH3B-205ENST00000529998 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
UBASH3B-205ENST00000529998 AIMP1Q12904 312 aaKnown RBP11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 TWISTNBQ3B726 338 aaPredicted RBP11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 CLEC4GQ6UXB4 293 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 MAP3K15Q6ZN16 1313 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 NLGN2Q8NFZ4 835 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 XAGE3Q8WTP9 111 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 DBF4Q9UBU7 674 aaPredicted RBP11.22□□□□□ -0.61
UBASH3B-205ENST00000529998 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 KIAA1551Q9HCM1 1747 aa11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 ERVV-1B6SEH8 477 aa11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 VAMP4O75379 141 aa11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 SERPINB2P05120 415 aa11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 KIF6Q6ZMV9 814 aa11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 PHAXQ9H814 394 aaKnown RBP11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
UBASH3B-205ENST00000529998 CACNA1FO60840 1977 aa11.2□□□□□ -0.62
UBASH3B-205ENST00000529998 CCDC30Q5VVM6 783 aa11.2□□□□□ -0.62
UBASH3B-205ENST00000529998 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
UBASH3B-205ENST00000529998 HYPKQ9NX55 129 aa11.2□□□□□ -0.62
UBASH3B-205ENST00000529998 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
UBASH3B-205ENST00000529998 ANKRD36CQ5JPF3 1778 aa11.2□□□□□ -0.62
UBASH3B-205ENST00000529998 C10orf71Q711Q0 1435 aa11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 ANKRD31Q8N7Z5 1873 aa11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 E9PSI1 815 aa11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 RGL2O15211 777 aa11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 GIGYF2Q6Y7W6 1299 aaKnown RBP11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 TRMT2AQ8IZ69 625 aaKnown RBP11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 NIP7Q9Y221 180 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBASH3B-205ENST00000529998 ARFGEF2Q9Y6D5 1785 aa11.18□□□□□ -0.62
UBASH3B-205ENST00000529998 CARMIL3Q8ND23 1372 aa11.18□□□□□ -0.62
UBASH3B-205ENST00000529998 GPTP24298 496 aa11.18□□□□□ -0.62
UBASH3B-205ENST00000529998 G2E3Q7L622 706 aa11.18□□□□□ -0.62
UBASH3B-205ENST00000529998 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
UBASH3B-205ENST00000529998 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
UBASH3B-205ENST00000529998 A0A0G2JLW4 131 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 PRR5LQ6MZQ0 368 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 ANKRD13DQ6ZTN6 518 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 PLBD2Q8NHP8 589 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 STK31Q9BXU1 1019 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 CHMP4AQ9BY43 222 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 ATP10DQ9P241 1426 aa11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 BRCA1P38398 1863 aaKnown RBP11.17□□□□□ -0.62
UBASH3B-205ENST00000529998 UBN2Q6ZU65 1347 aa11.16□□□□□ -0.62
UBASH3B-205ENST00000529998 GOLGB1Q14789 3259 aaKnown RBP11.16□□□□□ -0.62
UBASH3B-205ENST00000529998 DPEP1P16444 411 aa11.16□□□□□ -0.62
UBASH3B-205ENST00000529998 TGFB2P61812 414 aa11.16□□□□□ -0.62
UBASH3B-205ENST00000529998 NBPF5PQ86XG9 351 aaPredicted RBP11.16□□□□□ -0.62
UBASH3B-205ENST00000529998 PXDNLA1KZ92 1463 aa11.16□□□□□ -0.62
UBASH3B-205ENST00000529998 KCNA3P22001 575 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 CHRNA5P30532 468 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 SUSD4Q5VX71 490 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 TPTE2Q6XPS3 522 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 CNBD1Q8NA66 436 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 WWC3Q9ULE0 1092 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 DLEC1Q9Y238 1755 aa11.15□□□□□ -0.62
UBASH3B-205ENST00000529998 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
UBASH3B-205ENST00000529998 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
UBASH3B-205ENST00000529998 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
UBASH3B-205ENST00000529998 COL11A2P13942 1736 aaPredicted RBP11.14□□□□□ -0.63
UBASH3B-205ENST00000529998 PI4KAP2A4QPH2 592 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 ATP5J2-PTCD1G3V325 749 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 NPHP1O15259 732 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 NTSR2O95665 410 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 ST5P78524 1137 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 FLIIQ13045 1269 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 GPR162Q16538 588 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 PARP10Q53GL7 1025 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 NLRP10Q86W26 655 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 PI4KAP1Q8N8J0 262 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 ISCA1Q9BUE6 129 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 ADCY9O60503 1353 aa11.13□□□□□ -0.63
UBASH3B-205ENST00000529998 CACNA1SQ13698 1873 aa11.12□□□□□ -0.63
UBASH3B-205ENST00000529998 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms